RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 ST7LQ8TDW4 575 aa1.32□□□□□ -2.2
RNU6-440P-201ENST00000390882 GLYATL1Q969I3 302 aa1.32□□□□□ -2.2
RNU6-440P-201ENST00000390882 MRPL24Q96A35 216 aaKnown RBP1.32□□□□□ -2.2
RNU6-440P-201ENST00000390882 PNPLA2Q96AD5 504 aa1.32□□□□□ -2.2
RNU6-440P-201ENST00000390882 CAPNS2Q96L46 248 aa1.32□□□□□ -2.2
RNU6-440P-201ENST00000390882 CXorf58Q96LI9 332 aa1.32□□□□□ -2.2
RNU6-440P-201ENST00000390882 C1orf147Q96MC9 270 aaPredicted RBP1.32□□□□□ -2.2
RNU6-440P-201ENST00000390882 RUNDC3BQ96NL0 473 aa1.32□□□□□ -2.2
RNU6-440P-201ENST00000390882 PRAM1Q96QH2 718 aa1.32□□□□□ -2.2
RNU6-440P-201ENST00000390882 WWP1Q9H0M0 922 aa1.32□□□□□ -2.2
RNU6-440P-201ENST00000390882 CXXC4Q9H2H0 198 aa1.32□□□□□ -2.2
RNU6-440P-201ENST00000390882 TMEM245Q9H330 911 aa1.32□□□□□ -2.2
RNU6-440P-201ENST00000390882 DCTPP1Q9H773 170 aa1.32□□□□□ -2.2
RNU6-440P-201ENST00000390882 ZCCHC3Q9NUD5 404 aaKnown RBP1.32□□□□□ -2.2
RNU6-440P-201ENST00000390882 ACOXLQ9NUZ1 547 aa1.32□□□□□ -2.2
RNU6-440P-201ENST00000390882 DNAJC11Q9NVH1 559 aa1.32□□□□□ -2.2
RNU6-440P-201ENST00000390882 GPR83Q9NYM4 423 aa1.32□□□□□ -2.2
RNU6-440P-201ENST00000390882 TECRQ9NZ01 308 aaKnown RBP1.32□□□□□ -2.2
RNU6-440P-201ENST00000390882 ZNF581Q9P0T4 197 aa1.32□□□□□ -2.2
RNU6-440P-201ENST00000390882 HMG20BQ9P0W2 317 aa1.32□□□□□ -2.2
RNU6-440P-201ENST00000390882 ERVK-18Q9QC07 812 aa1.32□□□□□ -2.2
RNU6-440P-201ENST00000390882 MRTO4Q9UKD2 239 aaKnown RBP1.32□□□□□ -2.2
RNU6-440P-201ENST00000390882 KIF7Q2M1P5 1343 aa1.32□□□□□ -2.2
RNU6-440P-201ENST00000390882 DHX29Q7Z478 1369 aaKnown RBP1.32□□□□□ -2.2
RNU6-440P-201ENST00000390882 A0A0U1RQG5 324 aaPredicted RBP1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 E9PAM4 449 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 CCER2I3L3R5 266 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 EEF2KO00418 725 aaKnown RBP1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 E2F3O00716 465 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 NME2P1O60361 137 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 SRPX2O60687 465 aaPredicted RBP1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 KERAO60938 352 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 DUSP11O75319 330 aaKnown RBP1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 ATP6V1G1O75348 118 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 SRSF10O75494 262 aaKnown RBP1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 REC8O95072 547 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 RENP00797 406 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 FCER2P06734 321 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 MELTFP08582 738 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 HCKP08631 526 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 HMOX1P09601 288 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 HIST1H2AGP0C0S8 130 aaPredicted RBP1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 CCDC159P0C7I6 412 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 OR9G9P0C7N8 305 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 FAM200BP0CF97 657 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 HSD17B1P14061 328 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 ATP6V1B1P15313 513 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 FOSL2P15408 326 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 HLA-DPA1P20036 260 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 BCL3P20749 454 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 CALML3P27482 149 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 OAS2P29728 719 aaKnown RBP1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 COPB2P35606 906 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 CSRP3P50461 194 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 LIMK2P53671 638 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 GEMP55040 296 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 CCZ1BP86790 482 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 CCZ1P86791 482 aaPredicted RBP1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 ACTN3Q08043 901 aaPredicted RBP1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 CBX3Q13185 183 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 PEX6Q13608 980 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 CYLC2Q14093 348 aaPredicted RBP1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 KRT31Q15323 416 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 ZNF239Q16600 458 aaKnown RBP1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 PCK2Q16822 640 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 EPC2Q52LR7 807 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 EIPR1Q53HC9 387 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 NHLRC3Q5JS37 347 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 RHBDD2Q6NTF9 364 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 ABRAXAS1Q6UWZ7 409 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 Q6ZR54 194 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 Q6ZRG5 221 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 RAPH1Q70E73 1250 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 ITIH5Q86UX2 942 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 ZNF410Q86VK4 478 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 HIST2H2ABQ8IUE6 130 aaPredicted RBP1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 WDR49Q8IV35 697 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 SERPINA12Q8IW75 414 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 CNTN4Q8IWV2 1026 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 LINC00518Q8N0U6 118 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 PARP8Q8N3A8 854 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 ARL14Q8N4G2 192 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 RTL3Q8N8U3 475 aaKnown RBP1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 SUMF1Q8NBK3 374 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 SPC24Q8NBT2 197 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 CHDHQ8NE62 594 aaPredicted RBP1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 OR4Q3Q8NH05 313 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 OR4F5Q8NH21 305 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 OR4A16Q8NH70 328 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 RNASE8Q8TDE3 154 aaKnown RBP1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 AGAP11Q8TF27 550 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 ITLN1Q8WWA0 313 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 KRT35Q92764 455 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 ATP6V0A1Q93050 837 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 HIST1H2ACQ93077 130 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 SLCO4A1Q96BD0 722 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 NTNG2Q96CW9 530 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 RAB39BQ96DA2 213 aa1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 MRPL53Q96EL3 112 aaKnown RBP1.31□□□□□ -2.2
RNU6-440P-201ENST00000390882 RBM18Q96H35 190 aaKnown RBP1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms