RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 LAPTM4BQ86VI4 370 aa13.95□□□□□ -0.18
VPS9D1-201ENST00000389386 ZNF683Q8IZ20 524 aa13.95□□□□□ -0.18
VPS9D1-201ENST00000389386 COPS8Q99627 209 aa13.95□□□□□ -0.18
VPS9D1-201ENST00000389386 EGFL8Q99944 293 aa13.95□□□□□ -0.18
VPS9D1-201ENST00000389386 TSSK6Q9BXA6 273 aa13.95□□□□□ -0.18
VPS9D1-201ENST00000389386 HDHD2Q9H0R4 259 aa13.95□□□□□ -0.18
VPS9D1-201ENST00000389386 SAV1Q9H4B6 383 aaPredicted RBP13.95□□□□□ -0.18
VPS9D1-201ENST00000389386 PRDM5Q9NQX1 630 aaPredicted RBP13.95□□□□□ -0.18
VPS9D1-201ENST00000389386 WWOXQ9NZC7 414 aa13.95□□□□□ -0.18
VPS9D1-201ENST00000389386 LIPT1Q9Y234 373 aa13.95□□□□□ -0.18
VPS9D1-201ENST00000389386 STK25O00506 426 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 LANCL1O43813 399 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 NBNO60934 754 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 ACPPP15309 386 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 MC4RP32245 332 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 ZXDBP98169 803 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 IL10RBQ08334 325 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 ADAM15Q13444 863 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 ZNF169Q14929 603 aaPredicted RBP13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 TAF1AQ15573 450 aaPredicted RBP13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 ARHGAP15Q53QZ3 475 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 NHLRC3Q5JS37 347 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 ATAT1Q5SQI0 421 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 GLB1LQ6UWU2 654 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 FAM92BQ6ZTR7 304 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 GLT6D1Q7Z4J2 308 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 MIB1Q86YT6 1006 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 APIPQ96GX9 242 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 OR2M2Q96R28 347 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 IER2Q9BTL4 223 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 TRIM62Q9BVG3 475 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 THSD1Q9NS62 852 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 FKBPLQ9UIM3 349 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 BAIAP2Q9UQB8 552 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 OARD1Q9Y530 152 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 DSPPQ9NZW4 1301 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 MEIKINA0A087WXM9 373 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 GLYATL1P3A0A0U1RQE8 302 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 A0A1B0GVI7 797 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 MOXD2PA6NHM9 499 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 A8MXK9 166 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 M0R233 179 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 TNFRSF10BO14763 440 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 SLC30A4O14863 429 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 CASKO14936 926 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 MMP20O60882 483 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 LALBAP00709 142 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 SYPP08247 313 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 ITGALP20701 1170 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 PRPS1L1P21108 318 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 BTCP35070 178 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 FEN1P39748 380 aaKnown RBP13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 ETV5P41161 510 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 ERVFC1P60507 584 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 RPL6Q02878 288 aaKnown RBP13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 SRSF11Q05519 484 aaKnown RBP13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 TMEM91Q6ZNR0 172 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 ASB18Q6ZVZ8 466 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 BCDIN3DQ7Z5W3 292 aaKnown RBP13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 BMPERQ8N8U9 685 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 SMG7Q92540 1137 aaKnown RBP13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 DLL4Q9NR61 685 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 NUDT15Q9NV35 164 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 MED9Q9NWA0 146 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 TMEM248Q9NWD8 314 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 WBP1LQ9NX94 342 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 KCTD5Q9NXV2 234 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 HCN2Q9UL51 889 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 MRPS7Q9Y2R9 242 aaKnown RBP13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 PTPRDP23468 1912 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 NLRC5Q86WI3 1866 aa13.94□□□□□ -0.18
VPS9D1-201ENST00000389386 PQBP1O60828 265 aaKnown RBP13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 CLDN9O95484 217 aa13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 CCL5P13501 91 aa13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 EPB42P16452 691 aa13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 S100A12P80511 92 aa13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 FABP5Q01469 135 aa13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 FLI1Q01543 452 aaPredicted RBP13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 RGS7BPQ6MZT1 257 aaPredicted RBP13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 KANSL1Q7Z3B3 1105 aa13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 NAGSQ8N159 534 aa13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 IL17RCQ8NAC3 791 aa13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 C11orf65Q8NCR3 313 aa13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 SELENOMQ8WWX9 145 aa13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 ATOH1Q92858 354 aaPredicted RBP13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 CIDECQ96AQ7 238 aaPredicted RBP13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 OTUB1Q96FW1 271 aaPredicted RBP13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 CMTM7Q96FZ5 175 aa13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 APOLD1Q96LR9 279 aa13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 NPAS1Q99742 590 aa13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 PIP5K1AQ99755 562 aa13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 OR51B5Q9H339 312 aa13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 ABCC13Q9NSE7 274 aa13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 NDOR1Q9UHB4 597 aa13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 FNDC3AQ9Y2H6 1198 aaKnown RBP13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 GSTK1Q9Y2Q3 226 aa13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 SESN1Q9Y6P5 492 aa13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 GPR171O14626 319 aa13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 PCDH7O60245 1069 aa13.93□□□□□ -0.18
VPS9D1-201ENST00000389386 FGF9P31371 208 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms