RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 ACVR2AP27037 513 aa11.99□□□□□ -0.49
RPAIN-202ENST00000381208 BSGP35613 385 aa11.99□□□□□ -0.49
RPAIN-202ENST00000381208 GMPRP36959 345 aa11.99□□□□□ -0.49
RPAIN-202ENST00000381208 MAN2A2P49641 1150 aa11.99□□□□□ -0.49
RPAIN-202ENST00000381208 CCNG1P51959 295 aa11.99□□□□□ -0.49
RPAIN-202ENST00000381208 HNRNPH2P55795 449 aaKnown RBP11.99□□□□□ -0.49
RPAIN-202ENST00000381208 IRF9Q00978 393 aa11.99□□□□□ -0.49
RPAIN-202ENST00000381208 FOXO1Q12778 655 aa11.99□□□□□ -0.49
RPAIN-202ENST00000381208 CDSNQ15517 529 aa11.99□□□□□ -0.49
RPAIN-202ENST00000381208 TRADDQ15628 312 aa11.99□□□□□ -0.49
RPAIN-202ENST00000381208 WHAMMP3Q1A5X7 153 aa11.99□□□□□ -0.49
RPAIN-202ENST00000381208 ZNF791Q3KP31 576 aaPredicted RBP11.99□□□□□ -0.49
RPAIN-202ENST00000381208 C6orf163Q5TEZ5 329 aa11.99□□□□□ -0.49
RPAIN-202ENST00000381208 OR52E8Q6IFG1 317 aa11.99□□□□□ -0.49
RPAIN-202ENST00000381208 MEX3BQ6ZN04 569 aaKnown RBP11.99□□□□□ -0.49
RPAIN-202ENST00000381208 RNF111Q6ZNA4 994 aa11.99□□□□□ -0.49
RPAIN-202ENST00000381208 PAGE2Q7Z2X7 111 aa11.99□□□□□ -0.49
RPAIN-202ENST00000381208 GOLGA7Q7Z5G4 137 aa11.99□□□□□ -0.49
RPAIN-202ENST00000381208 OR4N5Q8IXE1 308 aa11.99□□□□□ -0.49
RPAIN-202ENST00000381208 C9orf40Q8IXQ3 194 aa11.99□□□□□ -0.49
RPAIN-202ENST00000381208 ZNF295-AS1Q8N0V1 137 aa11.99□□□□□ -0.49
RPAIN-202ENST00000381208 WDR20Q8TBZ3 569 aa11.99□□□□□ -0.49
RPAIN-202ENST00000381208 PAQR8Q8TEZ7 354 aa11.99□□□□□ -0.49
RPAIN-202ENST00000381208 RIT1Q92963 219 aa11.99□□□□□ -0.49
RPAIN-202ENST00000381208 ISL2Q96A47 359 aa11.99□□□□□ -0.49
RPAIN-202ENST00000381208 MRRFQ96E11 262 aaKnown RBP11.99□□□□□ -0.49
RPAIN-202ENST00000381208 GPR78Q96P69 363 aa11.99□□□□□ -0.49
RPAIN-202ENST00000381208 NTMT1Q9BV86 223 aa11.99□□□□□ -0.49
RPAIN-202ENST00000381208 CNPPD1Q9BV87 410 aa11.99□□□□□ -0.49
RPAIN-202ENST00000381208 VPS11Q9H270 941 aa11.99□□□□□ -0.49
RPAIN-202ENST00000381208 LDAHQ9H6V9 325 aa11.99□□□□□ -0.49
RPAIN-202ENST00000381208 SH2D2AQ9NP31 389 aa11.99□□□□□ -0.49
RPAIN-202ENST00000381208 CPSF2Q9P2I0 782 aaKnown RBP11.99□□□□□ -0.49
RPAIN-202ENST00000381208 ADAM29Q9UKF5 820 aa11.99□□□□□ -0.49
RPAIN-202ENST00000381208 ASB4Q9Y574 426 aa11.99□□□□□ -0.49
RPAIN-202ENST00000381208 PCDHGB3Q9Y5G1 929 aa11.99□□□□□ -0.49
RPAIN-202ENST00000381208 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.99□□□□□ -0.49
RPAIN-202ENST00000381208 ADGRG4Q8IZF6 3080 aa11.99□□□□□ -0.49
RPAIN-202ENST00000381208 KIF2AO00139 706 aaPredicted RBP11.98□□□□□ -0.49
RPAIN-202ENST00000381208 SMIM24O75264 130 aa11.98□□□□□ -0.49
RPAIN-202ENST00000381208 FBXO45P0C2W1 286 aa11.98□□□□□ -0.49
RPAIN-202ENST00000381208 CCL3P10147 92 aa11.98□□□□□ -0.49
RPAIN-202ENST00000381208 GABRA1P14867 456 aa11.98□□□□□ -0.49
RPAIN-202ENST00000381208 ARL1P40616 181 aaPredicted RBP11.98□□□□□ -0.49
RPAIN-202ENST00000381208 TMED10P49755 219 aaKnown RBP11.98□□□□□ -0.49
RPAIN-202ENST00000381208 HERVK_113P63132 956 aa11.98□□□□□ -0.49
RPAIN-202ENST00000381208 ERVK-8P63133 956 aa11.98□□□□□ -0.49
RPAIN-202ENST00000381208 RPP38P78345 283 aaKnown RBP11.98□□□□□ -0.49
RPAIN-202ENST00000381208 SLC7A5Q01650 507 aa11.98□□□□□ -0.49
RPAIN-202ENST00000381208 IFT88Q13099 833 aa11.98□□□□□ -0.49
RPAIN-202ENST00000381208 ZNF267Q14586 743 aaPredicted RBP11.98□□□□□ -0.49
RPAIN-202ENST00000381208 TECRLQ5HYJ1 363 aa11.98□□□□□ -0.49
RPAIN-202ENST00000381208 WLSQ5T9L3 541 aa11.98□□□□□ -0.49
RPAIN-202ENST00000381208 FRG2Q64ET8 278 aa11.98□□□□□ -0.49
RPAIN-202ENST00000381208 C18orf63Q68DL7 685 aa11.98□□□□□ -0.49
RPAIN-202ENST00000381208 B3GNT6Q6ZMB0 384 aa11.98□□□□□ -0.49
RPAIN-202ENST00000381208 NCCRP1Q6ZVX7 275 aaPredicted RBP11.98□□□□□ -0.49
RPAIN-202ENST00000381208 FBXW8Q8N3Y1 598 aa11.98□□□□□ -0.49
RPAIN-202ENST00000381208 MARVELD2Q8N4S9 558 aa11.98□□□□□ -0.49
RPAIN-202ENST00000381208 MNS1Q8NEH6 495 aa11.98□□□□□ -0.49
RPAIN-202ENST00000381208 MYRIPQ8NFW9 859 aa11.98□□□□□ -0.49
RPAIN-202ENST00000381208 SLC44A1Q8WWI5 657 aa11.98□□□□□ -0.49
RPAIN-202ENST00000381208 TP53INP1Q96A56 240 aa11.98□□□□□ -0.49
RPAIN-202ENST00000381208 PPWD1Q96BP3 646 aaKnown RBP11.98□□□□□ -0.49
RPAIN-202ENST00000381208 FRG2BQ96QU4 278 aa11.98□□□□□ -0.49
RPAIN-202ENST00000381208 LRRC1Q9BTT6 524 aa11.98□□□□□ -0.49
RPAIN-202ENST00000381208 SORBS1Q9BX66 1292 aaKnown RBP11.98□□□□□ -0.49
RPAIN-202ENST00000381208 ERVK-6Q9BXR3 956 aa11.98□□□□□ -0.49
RPAIN-202ENST00000381208 ZNF717Q9BY31 904 aaPredicted RBP11.98□□□□□ -0.49
RPAIN-202ENST00000381208 WWTR1Q9GZV5 400 aa11.98□□□□□ -0.49
RPAIN-202ENST00000381208 NOL11Q9H8H0 719 aaKnown RBP11.98□□□□□ -0.49
RPAIN-202ENST00000381208 MCCC2Q9HCC0 563 aa11.98□□□□□ -0.49
RPAIN-202ENST00000381208 ZFP64Q9NPA5 681 aa11.98□□□□□ -0.49
RPAIN-202ENST00000381208 ACKR4Q9NPB9 350 aa11.98□□□□□ -0.49
RPAIN-202ENST00000381208 B4GALT7Q9UBV7 327 aa11.98□□□□□ -0.49
RPAIN-202ENST00000381208 ACAD8Q9UKU7 415 aa11.98□□□□□ -0.49
RPAIN-202ENST00000381208 ERVK-19Q9WJR5 959 aa11.98□□□□□ -0.49
RPAIN-202ENST00000381208 RNF6Q9Y252 685 aa11.98□□□□□ -0.49
RPAIN-202ENST00000381208 TRGV5A0A0B4J1U4 118 aa11.97□□□□□ -0.49
RPAIN-202ENST00000381208 A0A0G2JMM0 328 aa11.97□□□□□ -0.49
RPAIN-202ENST00000381208 A0A1W2PPB8 328 aa11.97□□□□□ -0.49
RPAIN-202ENST00000381208 A0A1W2PR48 441 aa11.97□□□□□ -0.49
RPAIN-202ENST00000381208 A0A1W2PRS3 328 aa11.97□□□□□ -0.49
RPAIN-202ENST00000381208 ESYT3A0FGR9 886 aa11.97□□□□□ -0.49
RPAIN-202ENST00000381208 ANKRD33BA6NCL7 494 aa11.97□□□□□ -0.49
RPAIN-202ENST00000381208 KIR3DP1A8MWS1 328 aa11.97□□□□□ -0.49
RPAIN-202ENST00000381208 TP53I11O14683 189 aa11.97□□□□□ -0.49
RPAIN-202ENST00000381208 CDH16O75309 829 aa11.97□□□□□ -0.49
RPAIN-202ENST00000381208 NADKO95544 446 aaPredicted RBP11.97□□□□□ -0.49
RPAIN-202ENST00000381208 IGFBP2P18065 325 aa11.97□□□□□ -0.49
RPAIN-202ENST00000381208 PIK3R1P27986 724 aa11.97□□□□□ -0.49
RPAIN-202ENST00000381208 MAGEA5P43359 124 aa11.97□□□□□ -0.49
RPAIN-202ENST00000381208 MAGEA12P43365 314 aa11.97□□□□□ -0.49
RPAIN-202ENST00000381208 DNASE1L1P49184 302 aa11.97□□□□□ -0.49
RPAIN-202ENST00000381208 SLC37A1P57057 533 aa11.97□□□□□ -0.49
RPAIN-202ENST00000381208 KCNJ2P63252 427 aa11.97□□□□□ -0.49
RPAIN-202ENST00000381208 PMPCAQ10713 525 aa11.97□□□□□ -0.49
RPAIN-202ENST00000381208 EBPQ15125 230 aaKnown RBP11.97□□□□□ -0.49
RPAIN-202ENST00000381208 NTRK2Q16620 822 aa11.97□□□□□ -0.49
RPAIN-202ENST00000381208 GGTA1PQ4G0N0 100 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms