RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 ZNF583Q96ND8 569 aa12.57□□□□□ -0.4
NPHP4-203ENST00000378169 APOOQ9BUR5 198 aa12.57□□□□□ -0.4
NPHP4-203ENST00000378169 ENPP4Q9Y6X5 453 aa12.57□□□□□ -0.4
NPHP4-203ENST00000378169 TRIP11Q15643 1979 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 PIM1P11309 404 aaPredicted RBP12.56□□□□□ -0.4
NPHP4-203ENST00000378169 CNR2P34972 360 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 POU6F2P78424 691 aaPredicted RBP12.56□□□□□ -0.4
NPHP4-203ENST00000378169 TAP2Q03519 686 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 ZNF829Q3KNS6 432 aaPredicted RBP12.56□□□□□ -0.4
NPHP4-203ENST00000378169 PHF19Q5T6S3 580 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 METTL2BQ6P1Q9 378 aaKnown RBP12.56□□□□□ -0.4
NPHP4-203ENST00000378169 ANKRD33Q7Z3H0 272 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 ZSWIM9Q86XI8 627 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 LINC00471Q8N535 108 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 OR2L2Q8NH16 312 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 BBS10Q8TAM1 723 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 ZNF420Q8TAQ5 688 aaPredicted RBP12.56□□□□□ -0.4
NPHP4-203ENST00000378169 LRR1Q96L50 414 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 BRF2Q9HAW0 419 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 PRTFDC1Q9NRG1 225 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 KLHL42Q9P2K6 505 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 ATG2BQ96BY7 2078 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 ACOT8O14734 319 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 TAPBPO15533 448 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 SBK3P0C264 359 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 GPR4P46093 362 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 GCGRP47871 477 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 NCS1P62166 190 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 SELENOWP63302 87 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 HHEXQ03014 270 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 FCHO2Q0JRZ9 810 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 TMEM35AQ53FP2 167 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 ALKBH2Q6NS38 261 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 IQCF1Q8N6M8 205 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 OR52E1Q8NGJ3 308 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 RPLP0P6Q8NHW5 317 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 THAP3Q8WTV1 239 aaPredicted RBP12.56□□□□□ -0.4
NPHP4-203ENST00000378169 TMEM80Q96HE8 168 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 GTPBP2Q9BX10 602 aaKnown RBP12.56□□□□□ -0.4
NPHP4-203ENST00000378169 BTNL2Q9UIR0 455 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 LOXHD1Q8IVV2 1947 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 A0A1B0GTL3 188 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 HMGN2P05204 90 aaKnown RBP12.56□□□□□ -0.4
NPHP4-203ENST00000378169 P2RY2P41231 377 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 CDKN2CP42773 168 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 CSTF1Q05048 431 aaKnown RBP12.56□□□□□ -0.4
NPHP4-203ENST00000378169 IRF4Q15306 451 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 MOGQ16653 247 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 DECR1Q16698 335 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 TMEM44Q2T9K0 475 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 GFOD2Q3B7J2 385 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 OR52E8Q6IFG1 317 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 GKN2Q86XP6 184 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 GALNT12Q8IXK2 581 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 PELI3Q8N2H9 469 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 MND1Q9BWT6 205 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 GPR52Q9Y2T5 361 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 NUMBLQ9Y6R0 609 aa12.56□□□□□ -0.4
NPHP4-203ENST00000378169 ZNF195O14628 629 aa12.55□□□□□ -0.4
NPHP4-203ENST00000378169 DHFRP00374 187 aa12.55□□□□□ -0.4
NPHP4-203ENST00000378169 LCKP06239 509 aa12.55□□□□□ -0.4
NPHP4-203ENST00000378169 PVRP15151 417 aa12.55□□□□□ -0.4
NPHP4-203ENST00000378169 ZNF24P17028 368 aa12.55□□□□□ -0.4
NPHP4-203ENST00000378169 HNRNPA2B1P22626 353 aaKnown RBP12.55□□□□□ -0.4
NPHP4-203ENST00000378169 GNALP38405 381 aa12.55□□□□□ -0.4
NPHP4-203ENST00000378169 MC3RP41968 323 aa12.55□□□□□ -0.4
NPHP4-203ENST00000378169 AFMIDQ63HM1 303 aa12.55□□□□□ -0.4
NPHP4-203ENST00000378169 ASB18Q6ZVZ8 466 aa12.55□□□□□ -0.4
NPHP4-203ENST00000378169 ZNF784Q8NCA9 323 aaPredicted RBP12.55□□□□□ -0.4
NPHP4-203ENST00000378169 PEX11GQ96HA9 241 aa12.55□□□□□ -0.4
NPHP4-203ENST00000378169 TAS2R7Q9NYW3 318 aa12.55□□□□□ -0.4
NPHP4-203ENST00000378169 TBX21Q9UL17 535 aa12.55□□□□□ -0.4
NPHP4-203ENST00000378169 ABCG2Q9UNQ0 655 aa12.55□□□□□ -0.4
NPHP4-203ENST00000378169 ERVK-11Q9UQG0 969 aa12.55□□□□□ -0.4
NPHP4-203ENST00000378169 LIPT1Q9Y234 373 aa12.55□□□□□ -0.4
NPHP4-203ENST00000378169 A0A1B0GVT2 93 aa12.55□□□□□ -0.4
NPHP4-203ENST00000378169 FAM155AB1AL88 458 aaPredicted RBP12.55□□□□□ -0.4
NPHP4-203ENST00000378169 CACNG3O60359 315 aa12.55□□□□□ -0.4
NPHP4-203ENST00000378169 E2F2Q14209 437 aa12.55□□□□□ -0.4
NPHP4-203ENST00000378169 CLCA4Q14CN2 919 aa12.55□□□□□ -0.4
NPHP4-203ENST00000378169 PON3Q15166 354 aa12.55□□□□□ -0.4
NPHP4-203ENST00000378169 SMU1Q2TAY7 513 aa12.55□□□□□ -0.4
NPHP4-203ENST00000378169 CMPK2Q5EBM0 449 aa12.55□□□□□ -0.4
NPHP4-203ENST00000378169 SPATC1Q76KD6 591 aa12.55□□□□□ -0.4
NPHP4-203ENST00000378169 TSPYL5Q86VY4 417 aaPredicted RBP12.55□□□□□ -0.4
NPHP4-203ENST00000378169 ZNF676Q8N7Q3 588 aa12.55□□□□□ -0.4
NPHP4-203ENST00000378169 ZFP41Q8N8Y5 198 aa12.55□□□□□ -0.4
NPHP4-203ENST00000378169 PROKR2Q8NFJ6 384 aa12.55□□□□□ -0.4
NPHP4-203ENST00000378169 SUN3Q8TAQ9 357 aa12.55□□□□□ -0.4
NPHP4-203ENST00000378169 CHFRQ96EP1 664 aa12.55□□□□□ -0.4
NPHP4-203ENST00000378169 DMRTB1Q96MA1 342 aa12.55□□□□□ -0.4
NPHP4-203ENST00000378169 TMEM184CQ9NVA4 438 aa12.55□□□□□ -0.4
NPHP4-203ENST00000378169 MARK1Q9P0L2 795 aa12.55□□□□□ -0.4
NPHP4-203ENST00000378169 A0A1B0GW55 424 aa12.55□□□□□ -0.4
NPHP4-203ENST00000378169 ANTXRLA6NF34 631 aa12.55□□□□□ -0.4
NPHP4-203ENST00000378169 FAAHO00519 579 aa12.55□□□□□ -0.4
NPHP4-203ENST00000378169 ARHGEF15O94989 841 aa12.55□□□□□ -0.4
NPHP4-203ENST00000378169 DUX4L2P0CJ85 424 aa12.55□□□□□ -0.4
NPHP4-203ENST00000378169 DUX4L3P0CJ86 424 aa12.55□□□□□ -0.4
NPHP4-203ENST00000378169 DUX4L4P0CJ87 422 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms