RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 PSAT1Q9Y617 370 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 TMEM233B4DJY2 109 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 POLR1CO15160 346 aaPredicted RBP9.76□□□□□ -0.85
PTCH1-204ENST00000375290 RGS11O94810 467 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 ALX3O95076 343 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 ACRV1P26436 265 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 GPR50Q13585 617 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 APOFQ13790 326 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 PEA15Q15121 130 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 SLC22A7Q9Y694 548 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 DDX60Q8IY21 1712 aaKnown RBP9.76□□□□□ -0.85
PTCH1-204ENST00000375290 DBIP07108 87 aaKnown RBP9.76□□□□□ -0.85
PTCH1-204ENST00000375290 CCKBRP32239 447 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 KIAA1324Q6UXG2 1013 aaKnown RBP9.76□□□□□ -0.85
PTCH1-204ENST00000375290 GDPD4Q6W3E5 623 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 ZNF704Q6ZNC4 412 aaPredicted RBP9.76□□□□□ -0.85
PTCH1-204ENST00000375290 FAM83HQ6ZRV2 1179 aaPredicted RBP9.76□□□□□ -0.85
PTCH1-204ENST00000375290 TRIM46Q7Z4K8 759 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 PMM1Q92871 262 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 SLC38A1Q9H2H9 487 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 PIGMQ9H3S5 423 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 NEMP2A6NFY4 417 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 MOXD2PA6NHM9 499 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 INPPL1O15357 1258 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 S1PR4O95977 384 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 CLCNKBP51801 687 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 RPS3AP61247 264 aaKnown RBP9.76□□□□□ -0.85
PTCH1-204ENST00000375290 NKX3-2P78367 333 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 OXA1LQ15070 435 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 TATDN3Q17R31 274 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 PPP2R2DQ66LE6 453 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 FBXL22Q6P050 247 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 OR6V1Q8N148 313 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 PTERQ96BW5 349 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 ARHGAP39Q9C0H5 1083 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 AJAP1Q9UKB5 411 aaPredicted RBP9.76□□□□□ -0.85
PTCH1-204ENST00000375290 DHDHQ9UQ10 334 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 PIRO00625 290 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 EMC8O43402 210 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 SH3BGRLO75368 114 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 CCND3P30281 292 aaPredicted RBP9.76□□□□□ -0.85
PTCH1-204ENST00000375290 PUM1Q14671 1186 aaKnown RBP eCLIP9.76□□□□□ -0.85
PTCH1-204ENST00000375290 NRSN1Q8IZ57 195 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 SYT11Q9BT88 431 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 TP63Q9H3D4 680 aaPredicted RBP9.76□□□□□ -0.85
PTCH1-204ENST00000375290 NENFQ9UMX5 172 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 UNC119BA6NIH7 251 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 NIPSNAP2O75323 286 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 CD53P19397 219 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 HBMQ6B0K9 141 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 TMEM220Q6QAJ8 160 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 GALNTL5Q7Z4T8 443 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 TRAM1L1Q8N609 369 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 ZMIZ2Q8NF64 920 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 SFXN5Q8TD22 340 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 THAP4Q8WY91 577 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 UTP4Q969X6 686 aaKnown RBP9.76□□□□□ -0.85
PTCH1-204ENST00000375290 NUS1Q96E22 293 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 ABI3Q9P2A4 366 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 PCDHB14Q9Y5E9 798 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 KCPQ6ZWJ8 1503 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 GMDSO60547 372 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 APODP05090 189 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 TAZQ16635 292 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 HENMT1Q5T8I9 393 aaKnown RBP9.75□□□□□ -0.85
PTCH1-204ENST00000375290 ENPP7Q6UWV6 458 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 SNX29P2Q8IUI4 249 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 CHTF18Q8WVB6 975 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 TBL1XR1Q9BZK7 514 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 SLC22A14Q9Y267 594 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 TEX13DA0A0J9YY54 714 aaPredicted RBP9.75□□□□□ -0.85
PTCH1-204ENST00000375290 FAM230AA0A1W2PPH8 454 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 RAD51DO75771 328 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 HERV-K104P61576 105 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 AKR1C8PQ5T2L2 129 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 NDUFAF5Q5TEU4 345 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 C22orf42Q6IC83 251 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 JAGN1Q8N5M9 183 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 ZNF283Q8N7M2 679 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 OR7G3Q8NG95 312 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 SCGB1C1Q8TD33 95 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 NSMAFQ92636 917 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 ZNF566Q969W8 418 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 RBP7Q96R05 134 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 HDHD5Q9BXW7 423 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 ZNF700Q9H0M5 742 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 HMX1Q9NP08 348 aaPredicted RBP9.75□□□□□ -0.85
PTCH1-204ENST00000375290 F8W036 122 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 NME4O00746 187 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 UBL3O95164 117 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 APBB3O95704 486 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 MT-CO2P00403 227 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 TM4SF1P30408 202 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 NUDT6P53370 316 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 FGFBP1Q14512 234 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 UNC50Q53HI1 259 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 ALG10BQ5I7T1 473 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 OR2L8Q8NGY9 312 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 COQ8BQ96D53 544 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 NSUN3Q9H649 340 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms