RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 ZDHHC7Q9NXF8 308 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 SLC17A6Q9P2U8 582 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 NUDT19A8MXV4 375 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 SLC33A1O00400 549 aaPredicted RBP6.32□□□□□ -1.4
CHD6-203ENST00000373233 GRM6O15303 877 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 SLC16A8O95907 504 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 DBIP07108 87 aaKnown RBP6.32□□□□□ -1.4
CHD6-203ENST00000373233 CTBP1Q13363 440 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 ATXN7L2Q5T6C5 722 aaPredicted RBP6.32□□□□□ -1.4
CHD6-203ENST00000373233 TXNDC8Q6A555 127 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 ZNF730Q6ZMV8 503 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 TM9SF4Q92544 642 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 BPIFA1Q9NP55 256 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 UNC13CQ8NB66 2214 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 ABCA1O95477 2261 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 TMEM72A0PK05 275 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 MAPK9P45984 424 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 GRM2Q14416 872 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 RNF212Q495C1 297 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 C6orf141Q5SZD1 244 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.32□□□□□ -1.4
CHD6-203ENST00000373233 SMPDL3AQ92484 453 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 TOX2Q96NM4 488 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 MUS81Q96NY9 551 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 QRFPRQ96P65 431 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 USB1Q9BQ65 265 aaKnown RBP6.32□□□□□ -1.4
CHD6-203ENST00000373233 ASPNQ9BXN1 380 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 GPN2Q9H9Y4 310 aaPredicted RBP6.32□□□□□ -1.4
CHD6-203ENST00000373233 REV1Q9UBZ9 1251 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 GVINP1Q7Z2Y8 2422 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 A8MVJ9 347 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 FGF18O76093 207 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 GUCA1AP43080 201 aaPredicted RBP6.32□□□□□ -1.4
CHD6-203ENST00000373233 KIR3DL1P43629 444 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 GPR139Q6DWJ6 353 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 OR2T5Q6IEZ7 315 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 ARFGAP1Q8N6T3 406 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 OR2AP1Q8NGE2 309 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 OR2T29Q8NH02 315 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 SOX17Q9H6I2 414 aaPredicted RBP6.32□□□□□ -1.4
CHD6-203ENST00000373233 GPATCH2Q9NW75 528 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 MT-CYBP00156 380 aaPredicted RBP6.31□□□□□ -1.4
CHD6-203ENST00000373233 SRPRAP08240 638 aaKnown RBP6.31□□□□□ -1.4
CHD6-203ENST00000373233 SSTR4P31391 388 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 DLSTP36957 453 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 OXA1LQ15070 435 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 POM121L1PQ3SYA9 428 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 FAM174BQ3ZCQ3 159 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 PDSS1Q5T2R2 415 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 FAM151BQ6UXP7 276 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 C11orf65Q8NCR3 313 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 OR10A4Q9H209 315 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 NIPAL2Q9H841 368 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 CACNG2Q9Y698 323 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 A0A087WZY1 265 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 TEX13CA0A0J9YWL9 993 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 DAPL1A0PJW8 107 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 RFXANKO14593 260 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 IMPA2O14732 288 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 GSRP00390 522 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 PTPN2P17706 415 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 GM2AP17900 193 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 PRKCHP24723 683 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 ACVRL1P37023 503 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 ADH7P40394 386 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 PTCHD3Q3KNS1 767 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 IFI44LQ53G44 452 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 LYPLAL1Q5VWZ2 237 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 CNIH2Q6PI25 160 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 IGDCC3Q8IVU1 814 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 TTC9BQ8N6N2 239 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 OR10A6Q8NH74 314 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 ZNF461Q8TAF7 563 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 PINK1Q9BXM7 581 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 KLHL42Q9P2K6 505 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 TRPS1Q9UHF7 1281 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 BACE2Q9Y5Z0 518 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 TTC24A2A3L6 582 aaPredicted RBP6.31□□□□□ -1.4
CHD6-203ENST00000373233 STK25O00506 426 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 HSD3B1P14060 373 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 TIPARPQ7Z3E1 657 aaKnown RBP6.31□□□□□ -1.4
CHD6-203ENST00000373233 OR10K1Q8NGX5 313 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 OR4L1Q8NH43 312 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 CASTOR1Q8WTX7 329 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 DPF1Q92782 380 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 ATG5Q9H1Y0 275 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 MEAF6Q9HAF1 191 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 EMC7Q9NPA0 242 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 WDR45Q9Y484 360 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 TEX264Q9Y6I9 313 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 IFNA21P01568 189 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 SAGP10523 405 aaPredicted RBP6.31□□□□□ -1.4
CHD6-203ENST00000373233 ZP3P21754 424 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 DDOSTP39656 456 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 GSK3BP49841 420 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 POLR2LP62875 67 aaKnown RBP6.31□□□□□ -1.4
CHD6-203ENST00000373233 PFKPQ01813 784 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 FBXL19Q6PCT2 694 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 KCNJ9Q92806 393 aa6.31□□□□□ -1.4
CHD6-203ENST00000373233 ZNF599Q96NL3 588 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms