RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 MAPK14Q16539 360 aa16.39■□□□□ 0.21
PTP4A1-201ENST00000370651 TCEAL6Q6IPX3 200 aa16.39■□□□□ 0.21
PTP4A1-201ENST00000370651 OR4E2Q8NGC2 313 aa16.39■□□□□ 0.21
PTP4A1-201ENST00000370651 GPR150Q8NGU9 434 aa16.39■□□□□ 0.21
PTP4A1-201ENST00000370651 TMEM19Q96HH6 336 aa16.39■□□□□ 0.21
PTP4A1-201ENST00000370651 HEMK1Q9Y5R4 338 aaPredicted RBP16.39■□□□□ 0.21
PTP4A1-201ENST00000370651 CFL1P23528 166 aaKnown RBP16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 ADH7P40394 386 aa16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 AIMP2Q13155 320 aaKnown RBP16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 PDGFRLQ15198 375 aa16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 FTMTQ8N4E7 242 aa16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 CD200R1Q8TD46 325 aa16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 POTEKPQ9BYX7 375 aa16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 PNO1Q9NRX1 252 aaKnown RBP16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 GSKIPQ9P0R6 139 aa16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 TEX13DA0A0J9YY54 714 aaPredicted RBP16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 PFKMP08237 780 aa16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 PRDX3P30048 256 aaKnown RBP16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 NAA10P41227 235 aaPredicted RBP16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 PRKCZQ05513 592 aa16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 VEZF1Q14119 521 aa16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 RGNQ15493 299 aa16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 OR4K14Q8NGD5 310 aa16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.38■□□□□ 0.214e-7■■■■■ 31.4
PTP4A1-201ENST00000370651 EVA1BQ9NVM1 165 aa16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 TEX13CA0A0J9YWL9 993 aa16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 NFKBIEO00221 500 aa16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 FHP07954 510 aa16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 CTBP2P56545 445 aa16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 CHAF1BQ13112 559 aa16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 AGAP6Q5VW22 663 aa16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 GLT8D1Q68CQ7 371 aa16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 KDELC1Q6UW63 502 aa16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 AMIGO3Q86WK7 504 aa16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 ZNF280BQ86YH2 543 aa16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 NAGSQ8N159 534 aa16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 MS4A15Q8N5U1 240 aa16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 TRAM1L1Q8N609 369 aa16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 OR6N2Q8NGY6 317 aa16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 PHOSPHO1Q8TCT1 267 aa16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 CHFRQ96EP1 664 aa16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 AGAP4Q96P64 663 aa16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 NMNAT1Q9HAN9 279 aaPredicted RBP16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 TDP1Q9NUW8 608 aa16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 MSRAQ9UJ68 235 aa16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 HTR2AP28223 471 aa16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 HOXA11P31270 313 aaPredicted RBP16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 CDKN1CP49918 316 aaPredicted RBP16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 SELENOWP63302 87 aa16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 CCDC58Q4VC31 144 aa16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 PLAG1Q6DJT9 500 aa16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 GALNT7Q86SF2 657 aa16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 TMEM102Q8N9M5 508 aaPredicted RBP16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 NUP43Q8NFH3 380 aa16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 WDR6Q9NNW5 1121 aaKnown RBP16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 ABCD2Q9UBJ2 740 aa16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 C14orf166Q9Y224 244 aaKnown RBP16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 RGPD8O14715 1765 aaPredicted RBP16.38■□□□□ 0.21
PTP4A1-201ENST00000370651 RHPN2P1A8MT19 583 aa16.37■□□□□ 0.21
PTP4A1-201ENST00000370651 PPP6CO00743 305 aa16.37■□□□□ 0.21
PTP4A1-201ENST00000370651 GGT2P36268 569 aa16.37■□□□□ 0.21
PTP4A1-201ENST00000370651 ZXDBP98169 803 aa16.37■□□□□ 0.21
PTP4A1-201ENST00000370651 ZNF791Q3KP31 576 aaPredicted RBP16.37■□□□□ 0.21
PTP4A1-201ENST00000370651 ALG1LQ6GMV1 187 aa16.37■□□□□ 0.21
PTP4A1-201ENST00000370651 TSPAN33Q86UF1 283 aa16.37■□□□□ 0.21
PTP4A1-201ENST00000370651 RHOXF1Q8NHV9 184 aa16.37■□□□□ 0.21
PTP4A1-201ENST00000370651 BOCQ9BWV1 1114 aa16.37■□□□□ 0.21
PTP4A1-201ENST00000370651 INSL5Q9Y5Q6 135 aa16.37■□□□□ 0.21
PTP4A1-201ENST00000370651 GRXCR1A8MXD5 290 aa16.37■□□□□ 0.21
PTP4A1-201ENST00000370651 EMC8O43402 210 aa16.37■□□□□ 0.21
PTP4A1-201ENST00000370651 FMO6PO60774 539 aa16.37■□□□□ 0.21
PTP4A1-201ENST00000370651 VNN2O95498 520 aa16.37■□□□□ 0.21
PTP4A1-201ENST00000370651 CAPNS1P04632 268 aa16.37■□□□□ 0.21
PTP4A1-201ENST00000370651 CBFBQ13951 182 aa16.37■□□□□ 0.21
PTP4A1-201ENST00000370651 DECR1Q16698 335 aa16.37■□□□□ 0.21
PTP4A1-201ENST00000370651 DEFB115Q30KQ5 88 aa16.37■□□□□ 0.21
PTP4A1-201ENST00000370651 NRROSQ86YC3 692 aa16.37■□□□□ 0.21
PTP4A1-201ENST00000370651 PDZD9Q8IXQ8 264 aa16.37■□□□□ 0.21
PTP4A1-201ENST00000370651 ACVR1CQ8NER5 493 aa16.37■□□□□ 0.21
PTP4A1-201ENST00000370651 OR56A3Q8NH54 315 aa16.37■□□□□ 0.21
PTP4A1-201ENST00000370651 F2RL3Q96RI0 385 aa16.37■□□□□ 0.21
PTP4A1-201ENST00000370651 SPO11Q9Y5K1 396 aa16.37■□□□□ 0.21
PTP4A1-201ENST00000370651 WNT6Q9Y6F9 365 aa16.37■□□□□ 0.21
PTP4A1-201ENST00000370651 TRBV2A0A0J9YWF9 115 aa16.37■□□□□ 0.21
PTP4A1-201ENST00000370651 ZNF208O43345 1280 aa16.37■□□□□ 0.21
PTP4A1-201ENST00000370651 GKN3PP0CG01 181 aa16.37■□□□□ 0.21
PTP4A1-201ENST00000370651 ITGAMP11215 1152 aa16.37■□□□□ 0.21
PTP4A1-201ENST00000370651 PVALBP20472 110 aaPredicted RBP16.37■□□□□ 0.21
PTP4A1-201ENST00000370651 ID2Q02363 134 aa16.37■□□□□ 0.21
PTP4A1-201ENST00000370651 EFR3AQ14156 821 aa16.37■□□□□ 0.21
PTP4A1-201ENST00000370651 PYHIN1Q6K0P9 492 aa16.37■□□□□ 0.21
PTP4A1-201ENST00000370651 COMMD7Q86VX2 200 aa16.37■□□□□ 0.21
PTP4A1-201ENST00000370651 TMPRSS12Q86WS5 348 aa16.37■□□□□ 0.21
PTP4A1-201ENST00000370651 OR2T35Q8NGX2 323 aa16.37■□□□□ 0.21
PTP4A1-201ENST00000370651 CHPT1Q8WUD6 406 aa16.37■□□□□ 0.21
PTP4A1-201ENST00000370651 TMEM41AQ96HV5 264 aa16.37■□□□□ 0.21
PTP4A1-201ENST00000370651 A8MUA0 341 aa16.37■□□□□ 0.21
PTP4A1-201ENST00000370651 UGT2B10P36537 528 aa16.37■□□□□ 0.21
PTP4A1-201ENST00000370651 SLC6A9P48067 706 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms