RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 CEP76Q8TAP6 659 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 WDR20Q8TBZ3 569 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 TWIST2Q8WVJ9 160 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 SLC5A11Q8WWX8 675 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 TCEAL3Q969E4 200 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 SH3KBP1Q96B97 665 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 MBD6Q96DN6 1003 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 RNF125Q96EQ8 232 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 PTCD3Q96EY7 689 aaKnown RBP3.38□□□□□ -1.87
MCF2-202ENST00000370573 FAR2Q96K12 515 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 OR2A14Q96R47 310 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 HBEGFQ99075 208 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 NUSAP1Q9BXS6 441 aaKnown RBP3.38□□□□□ -1.87
MCF2-202ENST00000370573 SLC29A3Q9BZD2 475 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 NELFAQ9H3P2 528 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 GAREM1Q9H706 876 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 SYNPO2LQ9H987 977 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 MEAF6Q9HAF1 191 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 LANCL2Q9NS86 450 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 POT1Q9NUX5 634 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 ING3Q9NXR8 418 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 OR6C2Q9NZP2 312 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 ST6GALNAC2Q9UJ37 374 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 CDC42EP3Q9UKI2 254 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 STK38LQ9Y2H1 464 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 KLHL20Q9Y2M5 609 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 DTNAQ9Y4J8 743 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 KCNE2Q9Y6J6 123 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 RNF215Q9Y6U7 377 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 U3KQA8 63 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 MBD3L4A6NDZ8 208 aaPredicted RBP3.37□□□□□ -1.87
MCF2-202ENST00000370573 MBD3L3A6NE82 208 aaPredicted RBP3.37□□□□□ -1.87
MCF2-202ENST00000370573 CCT8L1PA6NM43 557 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 TRPC5OSA6NMA1 111 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 E9PBE3 544 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 H0YIV9 168 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 LCMT2O60294 686 aaKnown RBP3.37□□□□□ -1.87
MCF2-202ENST00000370573 KLHL41O60662 606 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 PRAMEF10O60809 474 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 CRCPO75575 148 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 TBX6O95947 436 aaPredicted RBP3.37□□□□□ -1.87
MCF2-202ENST00000370573 PLATP00750 562 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 PDYNP01213 254 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 PRR35P0CG20 571 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 SLC2A4P14672 509 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 UGT2B7P16662 529 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 GNAZP19086 355 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 MST1P26927 711 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 HMOX2P30519 316 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 SHMT2P34897 504 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 MPLP40238 635 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 ARL1P40616 181 aaPredicted RBP3.37□□□□□ -1.87
MCF2-202ENST00000370573 HNF4AP41235 474 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 FASLGP48023 281 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 ARRB1P49407 418 aaPredicted RBP3.37□□□□□ -1.87
MCF2-202ENST00000370573 CSNK1G2P78368 415 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 HMGCS1Q01581 520 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 HHEXQ03014 270 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 C14orf28Q4W4Y0 310 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 SPDYAQ5MJ70 313 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 LCE5AQ5TCM9 118 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 FRG2Q64ET8 278 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 GRHL2Q6ISB3 625 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 IL27RAQ6UWB1 636 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 H1FNTQ75WM6 255 aaPredicted RBP3.37□□□□□ -1.87
MCF2-202ENST00000370573 TMPRSS11BQ86T26 416 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 C17orf64Q86WR6 236 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 PLD3Q8IV08 490 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 LAS2Q8IYD9 372 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 FITM2Q8N6M3 262 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 ANKRD53Q8N9V6 530 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 SUMF1Q8NBK3 374 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 PRSS33Q8NF86 280 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 OR2L3Q8NG85 312 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 OR7G3Q8NG95 312 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 ACTRT2Q8TDY3 377 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 RSC1A1Q92681 617 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 C19orf60Q96EN9 201 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 RILPQ96NA2 401 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 C8orf49Q96NF6 230 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 PRAP1Q96NZ9 151 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 TRAPPC9Q96Q05 1148 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 FRG2BQ96QU4 278 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 SIKE1Q9BRV8 207 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 HAUS8Q9BT25 410 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 CCDC28BQ9BUN5 200 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 RAB11FIP5Q9BXF6 653 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 PCBD2Q9H0N5 130 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 EHD1Q9H4M9 534 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 ZNF385DQ9H6B1 395 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 PELI2Q9HAT8 420 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 BARX1Q9HBU1 254 aaPredicted RBP3.37□□□□□ -1.87
MCF2-202ENST00000370573 HEYLQ9NQ87 328 aaPredicted RBP3.37□□□□□ -1.87
MCF2-202ENST00000370573 TCF7L2Q9NQB0 619 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 SAR1AQ9NR31 198 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 SIDT1Q9NXL6 827 aaKnown RBP3.37□□□□□ -1.87
MCF2-202ENST00000370573 KCND3Q9UK17 655 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 ZDHHC8Q9ULC8 765 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 PCDHGB4Q9UN71 923 aa3.37□□□□□ -1.87
MCF2-202ENST00000370573 FEZF1A0PJY2 475 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms