RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 CCM2LQ9NUG4 571 aaPredicted RBP11.54□□□□□ -0.56
CAPN9-203ENST00000366666 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.53□□□□□ -0.56
CAPN9-203ENST00000366666 TRIM64A6NGJ6 449 aa11.53□□□□□ -0.56
CAPN9-203ENST00000366666 FAM227AF5H4B4 570 aa11.53□□□□□ -0.56
CAPN9-203ENST00000366666 BOLA2-SMG1P6H3BVE0 249 aa11.53□□□□□ -0.56
CAPN9-203ENST00000366666 PROM1O43490 865 aa11.53□□□□□ -0.56
CAPN9-203ENST00000366666 ANKRD34CP0C6C1 535 aa11.53□□□□□ -0.56
CAPN9-203ENST00000366666 FUT4P22083 530 aa11.53□□□□□ -0.56
CAPN9-203ENST00000366666 S100A3P33764 101 aa11.53□□□□□ -0.56
CAPN9-203ENST00000366666 TTKP33981 857 aa11.53□□□□□ -0.56
CAPN9-203ENST00000366666 HNRNPFP52597 415 aaKnown RBP11.53□□□□□ -0.56
CAPN9-203ENST00000366666 LIM2P55344 173 aa11.53□□□□□ -0.56
CAPN9-203ENST00000366666 MAT1AQ00266 395 aaKnown RBP11.53□□□□□ -0.56
CAPN9-203ENST00000366666 ZFP36L1Q07352 338 aaKnown RBP11.53□□□□□ -0.56
CAPN9-203ENST00000366666 FOXM1Q08050 763 aa11.53□□□□□ -0.56
CAPN9-203ENST00000366666 PDE7AQ13946 482 aa11.53□□□□□ -0.56
CAPN9-203ENST00000366666 ZNF750Q32MQ0 723 aa11.53□□□□□ -0.56
CAPN9-203ENST00000366666 MANEAQ5SRI9 462 aa11.53□□□□□ -0.56
CAPN9-203ENST00000366666 SRFBP1Q8NEF9 429 aaKnown RBP11.53□□□□□ -0.56
CAPN9-203ENST00000366666 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.53□□□□□ -0.56
CAPN9-203ENST00000366666 PPWD1Q96BP3 646 aaKnown RBP11.53□□□□□ -0.56
CAPN9-203ENST00000366666 COQ8BQ96D53 544 aa11.53□□□□□ -0.56
CAPN9-203ENST00000366666 OR6C1Q96RD1 312 aa11.53□□□□□ -0.56
CAPN9-203ENST00000366666 CIB1Q99828 191 aa11.53□□□□□ -0.56
CAPN9-203ENST00000366666 SLAMF7Q9NQ25 335 aa11.53□□□□□ -0.56
CAPN9-203ENST00000366666 GMPR2Q9P2T1 348 aaKnown RBP11.53□□□□□ -0.56
CAPN9-203ENST00000366666 DAPP1Q9UN19 280 aa11.53□□□□□ -0.56
CAPN9-203ENST00000366666 FAF1Q9UNN5 650 aaPredicted RBP11.53□□□□□ -0.56
CAPN9-203ENST00000366666 SLC22A7Q9Y694 548 aa11.53□□□□□ -0.56
CAPN9-203ENST00000366666 MAU2Q9Y6X3 613 aa11.53□□□□□ -0.56
CAPN9-203ENST00000366666 CEP250Q9BV73 2442 aa11.53□□□□□ -0.56
CAPN9-203ENST00000366666 PMS2P1A4D2B8 440 aa11.52□□□□□ -0.56
CAPN9-203ENST00000366666 FITM1A5D6W6 292 aa11.52□□□□□ -0.56
CAPN9-203ENST00000366666 OR2W5A6NFC9 320 aa11.52□□□□□ -0.56
CAPN9-203ENST00000366666 URADA6NGE7 173 aa11.52□□□□□ -0.56
CAPN9-203ENST00000366666 TOX3O15405 576 aaPredicted RBP11.52□□□□□ -0.56
CAPN9-203ENST00000366666 IL6P05231 212 aa11.52□□□□□ -0.56
CAPN9-203ENST00000366666 GSNP06396 782 aa11.52□□□□□ -0.56
CAPN9-203ENST00000366666 DDCP20711 480 aa11.52□□□□□ -0.56
CAPN9-203ENST00000366666 MYF6P23409 242 aa11.52□□□□□ -0.56
CAPN9-203ENST00000366666 KIR3DL1P43629 444 aa11.52□□□□□ -0.56
CAPN9-203ENST00000366666 DUSP2Q05923 314 aa11.52□□□□□ -0.56
CAPN9-203ENST00000366666 CPTPQ5TA50 214 aa11.52□□□□□ -0.56
CAPN9-203ENST00000366666 DLEU7Q6UYE1 221 aa11.52□□□□□ -0.56
CAPN9-203ENST00000366666 PIP4P1Q86T03 277 aa11.52□□□□□ -0.56
CAPN9-203ENST00000366666 GPR180Q86V85 440 aa11.52□□□□□ -0.56
CAPN9-203ENST00000366666 KMT5CQ86Y97 462 aa11.52□□□□□ -0.56
CAPN9-203ENST00000366666 CLEC4FQ8N1N0 589 aa11.52□□□□□ -0.56
CAPN9-203ENST00000366666 SCAIQ8N9R8 606 aa11.52□□□□□ -0.56
CAPN9-203ENST00000366666 FAM47BQ8NA70 645 aa11.52□□□□□ -0.56
CAPN9-203ENST00000366666 OR8J2Q8NGG1 315 aa11.52□□□□□ -0.56
CAPN9-203ENST00000366666 PMEPA1Q969W9 287 aa11.52□□□□□ -0.56
CAPN9-203ENST00000366666 EXOSC8Q96B26 276 aaKnown RBP11.52□□□□□ -0.56
CAPN9-203ENST00000366666 SERINC2Q96SA4 455 aa11.52□□□□□ -0.56
CAPN9-203ENST00000366666 CTRCQ99895 268 aa11.52□□□□□ -0.56
CAPN9-203ENST00000366666 DUSP26Q9BV47 211 aa11.52□□□□□ -0.56
CAPN9-203ENST00000366666 RBCK1Q9BYM8 510 aa11.52□□□□□ -0.56
CAPN9-203ENST00000366666 MIEF1Q9NQG6 463 aa11.52□□□□□ -0.56
CAPN9-203ENST00000366666 SIDT1Q9NXL6 827 aaKnown RBP11.52□□□□□ -0.56
CAPN9-203ENST00000366666 HCN3Q9P1Z3 774 aa11.52□□□□□ -0.56
CAPN9-203ENST00000366666 ATP6V1HQ9UI12 483 aa11.52□□□□□ -0.56
CAPN9-203ENST00000366666 DCHS1Q96JQ0 3298 aa11.52□□□□□ -0.56
CAPN9-203ENST00000366666 MAGEB3O15480 346 aa11.52□□□□□ -0.57
CAPN9-203ENST00000366666 ZNF749O43361 778 aa11.52□□□□□ -0.57
CAPN9-203ENST00000366666 PRMT3O60678 531 aa11.52□□□□□ -0.57
CAPN9-203ENST00000366666 C8orf89P0DMQ9 161 aa11.52□□□□□ -0.57
CAPN9-203ENST00000366666 CCL4P13236 92 aa11.52□□□□□ -0.57
CAPN9-203ENST00000366666 IL10P22301 178 aa11.52□□□□□ -0.57
CAPN9-203ENST00000366666 HPCAL1P37235 193 aa11.52□□□□□ -0.57
CAPN9-203ENST00000366666 TSFMP43897 325 aaKnown RBP11.52□□□□□ -0.57
CAPN9-203ENST00000366666 GCGRP47871 477 aa11.52□□□□□ -0.57
CAPN9-203ENST00000366666 ARFIP1P53367 373 aa11.52□□□□□ -0.57
CAPN9-203ENST00000366666 INSM1Q01101 510 aaPredicted RBP11.52□□□□□ -0.57
CAPN9-203ENST00000366666 BNIP2Q12982 314 aa11.52□□□□□ -0.57
CAPN9-203ENST00000366666 NFYCQ13952 458 aa11.52□□□□□ -0.57
CAPN9-203ENST00000366666 MAPKAPK3Q16644 382 aa11.52□□□□□ -0.57
CAPN9-203ENST00000366666 TTLL10Q6ZVT0 673 aa11.52□□□□□ -0.57
CAPN9-203ENST00000366666 MSRB3Q8IXL7 192 aa11.52□□□□□ -0.57
CAPN9-203ENST00000366666 KIAA2013Q8IYS2 634 aa11.52□□□□□ -0.57
CAPN9-203ENST00000366666 SLC38A9Q8NBW4 561 aa11.52□□□□□ -0.57
CAPN9-203ENST00000366666 ZNF420Q8TAQ5 688 aaPredicted RBP11.52□□□□□ -0.57
CAPN9-203ENST00000366666 DNAJB14Q8TBM8 379 aa11.52□□□□□ -0.57
CAPN9-203ENST00000366666 TSPEARQ8WU66 669 aa11.52□□□□□ -0.57
CAPN9-203ENST00000366666 PPCDCQ96CD2 204 aa11.52□□□□□ -0.57
CAPN9-203ENST00000366666 AURKBQ96GD4 344 aaPredicted RBP11.52□□□□□ -0.57
CAPN9-203ENST00000366666 GPATCH1Q9BRR8 931 aaKnown RBP11.52□□□□□ -0.57
CAPN9-203ENST00000366666 NLNQ9BYT8 704 aa11.52□□□□□ -0.57
CAPN9-203ENST00000366666 TMEM45AQ9NWC5 275 aa11.52□□□□□ -0.57
CAPN9-203ENST00000366666 SLC25A37Q9NYZ2 338 aa11.52□□□□□ -0.57
CAPN9-203ENST00000366666 VAPAQ9P0L0 249 aa11.52□□□□□ -0.57
CAPN9-203ENST00000366666 LEF1Q9UJU2 399 aaPredicted RBP11.52□□□□□ -0.57
CAPN9-203ENST00000366666 FAM32AQ9Y421 112 aaKnown RBP11.52□□□□□ -0.57
CAPN9-203ENST00000366666 PTPRZ1P23471 2315 aaPredicted RBP11.52□□□□□ -0.57
CAPN9-203ENST00000366666 B3GALT2O43825 422 aa11.51□□□□□ -0.57
CAPN9-203ENST00000366666 ALAS2P22557 587 aa11.51□□□□□ -0.57
CAPN9-203ENST00000366666 PTPN6P29350 595 aa11.51□□□□□ -0.57
CAPN9-203ENST00000366666 OR1D4P47884 311 aa11.51□□□□□ -0.57
CAPN9-203ENST00000366666 SLC7A2P52569 658 aa11.51□□□□□ -0.57
CAPN9-203ENST00000366666 SIM1P81133 766 aaPredicted RBP11.51□□□□□ -0.57
CAPN9-203ENST00000366666 SHC2P98077 582 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms