RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 SCML2Q9UQR0 700 aa0.79□□□□□ -2.28
RNU6-238P-201ENST00000363313 WIF1Q9Y5W5 379 aa0.79□□□□□ -2.28
RNU6-238P-201ENST00000363313 PARD3Q8TEW0 1356 aa0.79□□□□□ -2.28
RNU6-238P-201ENST00000363313 G3V3Y1 287 aa0.78□□□□□ -2.28
RNU6-238P-201ENST00000363313 CLN5O75503 358 aa0.78□□□□□ -2.28
RNU6-238P-201ENST00000363313 GRAP2O75791 330 aa0.78□□□□□ -2.28
RNU6-238P-201ENST00000363313 CELF2O95319 508 aaKnown RBP0.78□□□□□ -2.28
RNU6-238P-201ENST00000363313 SLC2A10O95528 541 aa0.78□□□□□ -2.28
RNU6-238P-201ENST00000363313 IGFBP3P17936 291 aaPredicted RBP0.78□□□□□ -2.28
RNU6-238P-201ENST00000363313 UGT1A3P35503 534 aa0.78□□□□□ -2.28
RNU6-238P-201ENST00000363313 EIF2DP41214 584 aaKnown RBP0.78□□□□□ -2.28
RNU6-238P-201ENST00000363313 OR3A4PP47883 348 aa0.78□□□□□ -2.28
RNU6-238P-201ENST00000363313 CAV2P51636 162 aa0.78□□□□□ -2.28
RNU6-238P-201ENST00000363313 CETN1Q12798 172 aa0.78□□□□□ -2.28
RNU6-238P-201ENST00000363313 ALCAMQ13740 583 aa0.78□□□□□ -2.28
RNU6-238P-201ENST00000363313 TSPO2Q5TGU0 170 aa0.78□□□□□ -2.28
RNU6-238P-201ENST00000363313 METTL11BQ5VVY1 283 aa0.78□□□□□ -2.28
RNU6-238P-201ENST00000363313 PHLDB2Q86SQ0 1253 aa0.78□□□□□ -2.28
RNU6-238P-201ENST00000363313 CALHM3Q86XJ0 350 aa0.78□□□□□ -2.28
RNU6-238P-201ENST00000363313 MDS2Q8NDY4 140 aa0.78□□□□□ -2.28
RNU6-238P-201ENST00000363313 GOLGA5Q8TBA6 731 aa0.78□□□□□ -2.28
RNU6-238P-201ENST00000363313 ZCCHC13Q8WW36 166 aaKnown RBP0.78□□□□□ -2.28
RNU6-238P-201ENST00000363313 EXT2Q93063 718 aa0.78□□□□□ -2.28
RNU6-238P-201ENST00000363313 ZNF274Q96GC6 653 aaPredicted RBP0.78□□□□□ -2.28
RNU6-238P-201ENST00000363313 SPIN2AQ99865 258 aa0.78□□□□□ -2.28
RNU6-238P-201ENST00000363313 SPIN2BQ9BPZ2 258 aa0.78□□□□□ -2.28
RNU6-238P-201ENST00000363313 Q9H3A6 140 aa0.78□□□□□ -2.28
RNU6-238P-201ENST00000363313 RNF41Q9H4P4 317 aaPredicted RBP0.78□□□□□ -2.28
RNU6-238P-201ENST00000363313 TMOD3Q9NYL9 352 aa0.78□□□□□ -2.28
RNU6-238P-201ENST00000363313 CPSF2Q9P2I0 782 aaKnown RBP0.78□□□□□ -2.28
RNU6-238P-201ENST00000363313 PCDHGA1Q9Y5H4 931 aa0.78□□□□□ -2.28
RNU6-238P-201ENST00000363313 NID2Q14112 1375 aa0.78□□□□□ -2.28
RNU6-238P-201ENST00000363313 MTCL1Q9Y4B5 1905 aaKnown RBP0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 LRRK1Q38SD2 2015 aa0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 IGLV2-18A0A075B6J9 118 aa0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 A0A0B4J203 849 aa0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 hCG_1809904A0A1W2PP81 198 aa0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 A0A1W2PPE2 198 aa0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 A0A1W2PR64 198 aa0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 TMEM110-MUSTN1A8MSY1 372 aa0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 OR7A17O14581 309 aa0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 HTATSF1O43719 755 aaKnown RBP0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 RNASE2P10153 161 aaKnown RBP0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 SPP1P10451 314 aa0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 PNMTP11086 282 aa0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 EEF2P13639 858 aaKnown RBP0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 ADRA2CP18825 462 aa0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 PTPN4P29074 926 aa0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 IL2RGP31785 369 aa0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 RPS10P46783 165 aaKnown RBP0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 RAB28P51157 221 aa0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 CCR4P51679 360 aa0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 NUP107P57740 925 aa0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 MFGE8Q08431 387 aaPredicted RBP0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 LCP2Q13094 533 aa0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 WTAPQ15007 396 aa0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 ACER2Q5QJU3 275 aa0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 WDR78Q5VTH9 848 aa0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 CCDC30Q5VVM6 783 aa0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 TAF3Q5VWG9 929 aa0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 SULT1C3Q6IMI6 304 aa0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 STOX1Q6ZVD7 989 aa0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 ABHD12BQ7Z5M8 362 aaPredicted RBP0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 TMEM110Q86TL2 294 aa0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 C17orf64Q86WR6 236 aa0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 MMAAQ8IVH4 418 aaKnown RBP0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 RELL2Q8NC24 303 aaPredicted RBP0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 OR4F5Q8NH21 305 aa0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 NEIL3Q8TAT5 605 aa0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 RAB40CQ96S21 281 aa0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 POLR3GLQ9BT43 218 aa0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 GTPBP2Q9BX10 602 aaKnown RBP0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 OPN3Q9H1Y3 402 aaPredicted RBP0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 MTIF3Q9H2K0 278 aaKnown RBP0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 NXF3Q9H4D5 531 aaKnown RBP0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 APMAPQ9HDC9 416 aa0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 EIF3KQ9UBQ5 218 aaKnown RBP0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 SMC3Q9UQE7 1217 aa0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 MAGED1Q9Y5V3 778 aaPredicted RBP0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 AHNAKQ09666 5890 aaKnown RBP0.77□□□□□ -2.29
RNU6-238P-201ENST00000363313 RLFQ13129 1914 aa0.76□□□□□ -2.29
RNU6-238P-201ENST00000363313 NLRC5Q86WI3 1866 aa0.76□□□□□ -2.29
RNU6-238P-201ENST00000363313 RSF1Q96T23 1441 aaPredicted RBP0.76□□□□□ -2.29
RNU6-238P-201ENST00000363313 ITIH6Q6UXX5 1313 aa0.76□□□□□ -2.29
RNU6-238P-201ENST00000363313 FAM166BA8MTA8 275 aa0.76□□□□□ -2.29
RNU6-238P-201ENST00000363313 KIAA0513O60268 411 aa0.76□□□□□ -2.29
RNU6-238P-201ENST00000363313 DOK2O60496 412 aa0.76□□□□□ -2.29
RNU6-238P-201ENST00000363313 RBBP9O75884 186 aa0.76□□□□□ -2.29
RNU6-238P-201ENST00000363313 ZNF286BP0CG31 522 aa0.76□□□□□ -2.29
RNU6-238P-201ENST00000363313 SP9P0CG40 484 aa0.76□□□□□ -2.29
RNU6-238P-201ENST00000363313 CCDC166P0CW27 439 aa0.76□□□□□ -2.29
RNU6-238P-201ENST00000363313 CYP11B1P15538 503 aa0.76□□□□□ -2.29
RNU6-238P-201ENST00000363313 AZGP1P25311 298 aaKnown RBP0.76□□□□□ -2.29
RNU6-238P-201ENST00000363313 SRD5A2P31213 254 aa0.76□□□□□ -2.29
RNU6-238P-201ENST00000363313 POU3F4P49335 361 aa0.76□□□□□ -2.29
RNU6-238P-201ENST00000363313 RPL27P61353 136 aaKnown RBP0.76□□□□□ -2.29
RNU6-238P-201ENST00000363313 TIMM10P62072 90 aa0.76□□□□□ -2.29
RNU6-238P-201ENST00000363313 PSMC6P62333 389 aa0.76□□□□□ -2.29
RNU6-238P-201ENST00000363313 STK4Q13043 487 aa0.76□□□□□ -2.29
RNU6-238P-201ENST00000363313 ELAVL3Q14576 367 aaKnown RBP0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms