RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 ACBD7Q8N6N7 88 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 OR7D4Q8NG98 312 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 OR13F1Q8NGS4 319 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 RETREG1Q9H6L5 497 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 PTGDR2Q9Y5Y4 395 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 AP1G1O43747 822 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 CYP17A1P05093 508 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 IVDP26440 423 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 RAP2BP61225 183 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 CHRFAM7AQ494W8 412 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 CLEC20AQ6ZU45 233 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 TMEM135Q86UB9 458 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 COPS5Q92905 334 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 MOAP1Q96BY2 351 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 TRMT61BQ9BVS5 477 aaKnown RBP8.41□□□□□ -1.06
COL6A6-201ENST00000358511 PHPT1Q9NRX4 125 aaPredicted RBP8.41□□□□□ -1.06
COL6A6-201ENST00000358511 SMCHD1A6NHR9 2005 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 SLC22A31A6NKX4 558 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 LATS1O95835 1130 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 EPOP01588 193 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 LMO2P25791 158 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 CLCNKBP51801 687 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 ELOAQ14241 798 aaKnown RBP8.41□□□□□ -1.06
COL6A6-201ENST00000358511 GRIK5Q16478 980 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 MYOCQ99972 504 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 CRISP1P54107 249 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 KCNC3Q14003 757 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 ABHD13Q7L211 337 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 SOCS4Q8WXH5 440 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 FCRL3Q96P31 734 aaPredicted RBP8.41□□□□□ -1.06
COL6A6-201ENST00000358511 VRK1Q99986 396 aaPredicted RBP8.41□□□□□ -1.06
COL6A6-201ENST00000358511 DPYSL5Q9BPU6 564 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 HEBP1Q9NRV9 189 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 A0A1B0GVT2 93 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 PIP5K1CO60331 668 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 TGFB1P01137 390 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 CSF1P09603 554 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 BMP4P12644 408 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 C12orf40Q86WS4 652 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 FKBP10Q96AY3 582 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 SGTBQ96EQ0 304 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 PPP1R14DQ9NXH3 145 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 OR6C2Q9NZP2 312 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 CD84Q9UIB8 345 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 UGT2A1Q9Y4X1 527 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 A0A1W2PPL8 197 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 LRRC72A6NJI9 287 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 SLC22A5O76082 557 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 PIGRP01833 764 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 UCHL1P09936 223 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 RRAS2P62070 204 aaPredicted RBP8.41□□□□□ -1.06
COL6A6-201ENST00000358511 HMGN3Q15651 99 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 SMAP2Q8WU79 429 aaPredicted RBP8.41□□□□□ -1.06
COL6A6-201ENST00000358511 THEM6Q8WUY1 208 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 C16orf58Q96GQ5 468 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 MFFQ9GZY8 342 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 SLC38A1Q9H2H9 487 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 SCN1AP35498 2009 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 TOPAZ1Q8N9V7 1692 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 LOC730098B7Z3J9 87 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 G3V2L1 256 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 TPPPO94811 219 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 SLC34A2O95436 690 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 ERCC1P07992 297 aaPredicted RBP8.4□□□□□ -1.06
COL6A6-201ENST00000358511 MRPL3P09001 348 aaKnown RBP8.4□□□□□ -1.06
COL6A6-201ENST00000358511 SPATA31D3P0C874 917 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 S1PR1P21453 382 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 DYRK1AQ13627 763 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 ODF4Q2M2E3 257 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 SPATA31D4Q6ZUB0 917 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 NRARPQ7Z6K4 114 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 THOC6Q86W42 341 aaKnown RBP8.4□□□□□ -1.06
COL6A6-201ENST00000358511 B3GNT7Q8NFL0 401 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 ELP4Q96EB1 424 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 TMEM41AQ96HV5 264 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 PTPN18Q99952 460 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 TTPALQ9BTX7 342 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 POT1Q9NUX5 634 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 ZNF225Q9UK10 706 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 SVILO95425 2214 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 CIB4A0PJX0 185 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 ANKRD66B4E2M5 251 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 GPR25O00155 361 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 IRAK2O43187 625 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 STBD1O95210 358 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 KDELR2P33947 212 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 ADH7P40394 386 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 NT5C3BQ969T7 300 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 YIPF4Q9BSR8 244 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 WRAP53Q9BUR4 548 aaKnown RBP8.4□□□□□ -1.06
COL6A6-201ENST00000358511 NME7Q9Y5B8 376 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 TOGARAM1Q9Y4F4 1720 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 ALX3O95076 343 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 GGT2P36268 569 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 DLSTP36957 453 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 TARBP2Q15633 366 aaKnown RBP8.4□□□□□ -1.06
COL6A6-201ENST00000358511 PRAMEF14Q5SWL7 426 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 METAP1DQ6UB28 335 aaPredicted RBP8.4□□□□□ -1.06
COL6A6-201ENST00000358511 KCTD13Q8WZ19 329 aa8.4□□□□□ -1.06
COL6A6-201ENST00000358511 NSMAFQ92636 917 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms