RNA–Protein interactions for RNA: ENST00000357450.8

SMC1B-201, Transcript of structural maintenance of chromosomes 1B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMC1B, Length 4,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-201ENST00000357450 EFNA1P20827 205 aaPredicted RBP3.56□□□□□ -1.84
SMC1B-201ENST00000357450 PTPN6P29350 595 aa3.56□□□□□ -1.84
SMC1B-201ENST00000357450 AGTR2P50052 363 aa3.56□□□□□ -1.84
SMC1B-201ENST00000357450 ARSDP51689 593 aa3.56□□□□□ -1.84
SMC1B-201ENST00000357450 TSNQ15631 228 aaKnown RBP3.56□□□□□ -1.84
SMC1B-201ENST00000357450 EXT1Q16394 746 aa3.56□□□□□ -1.84
SMC1B-201ENST00000357450 PLEKHN1Q494U1 663 aaPredicted RBP3.56□□□□□ -1.84
SMC1B-201ENST00000357450 MANEALQ5VSG8 457 aa3.56□□□□□ -1.84
SMC1B-201ENST00000357450 C9orf135Q5VTT2 229 aa3.56□□□□□ -1.84
SMC1B-201ENST00000357450 KCTD16Q68DU8 428 aa3.56□□□□□ -1.84
SMC1B-201ENST00000357450 JMJD6Q6NYC1 403 aaPredicted RBP3.56□□□□□ -1.84
SMC1B-201ENST00000357450 C16orf62Q7Z3J2 963 aa3.56□□□□□ -1.84
SMC1B-201ENST00000357450 TECPR1Q7Z6L1 1165 aa3.56□□□□□ -1.84
SMC1B-201ENST00000357450 PIANPQ8IYJ0 282 aa3.56□□□□□ -1.84
SMC1B-201ENST00000357450 CACTIN-AS1Q8N1I8 211 aa3.56□□□□□ -1.84
SMC1B-201ENST00000357450 BEST3Q8N1M1 668 aa3.56□□□□□ -1.84
SMC1B-201ENST00000357450 CPSF7Q8N684 471 aaKnown RBP3.56□□□□□ -1.84
SMC1B-201ENST00000357450 STAG3L4Q8TBR4 150 aa3.56□□□□□ -1.84
SMC1B-201ENST00000357450 PROKR1Q8TCW9 393 aa3.56□□□□□ -1.84
SMC1B-201ENST00000357450 NUDT8Q8WV74 236 aa3.56□□□□□ -1.84
SMC1B-201ENST00000357450 IPCEF1Q8WWN9 437 aaPredicted RBP3.56□□□□□ -1.84
SMC1B-201ENST00000357450 SLC5A11Q8WWX8 675 aa3.56□□□□□ -1.84
SMC1B-201ENST00000357450 ALG14Q96F25 216 aa3.56□□□□□ -1.84
SMC1B-201ENST00000357450 SIGLEC10Q96LC7 697 aa3.56□□□□□ -1.84
SMC1B-201ENST00000357450 CLEC4AQ9UMR7 237 aa3.56□□□□□ -1.84
SMC1B-201ENST00000357450 OR51B4Q9Y5P0 310 aa3.56□□□□□ -1.84
SMC1B-201ENST00000357450 DNMT3AQ9Y6K1 912 aaPredicted RBP3.56□□□□□ -1.84
SMC1B-201ENST00000357450 ZNF292O60281 2723 aa3.56□□□□□ -1.84
SMC1B-201ENST00000357450 KRTAP4-8A0A0G2JLE6 195 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 OR5H15A6NDH6 313 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 ASNA1O43681 348 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 PRSS23O95084 383 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 ABHD2P08910 425 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 ZNF888P0CJ79 500 aaPredicted RBP3.55□□□□□ -1.84
SMC1B-201ENST00000357450 TDGF1P13385 188 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 POU3F2P20265 443 aaPredicted RBP3.55□□□□□ -1.84
SMC1B-201ENST00000357450 MAOAP21397 527 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 CCNOP22674 350 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 PAX7P23759 505 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 STX2P32856 288 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 TRIM23P36406 574 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 POLR2IP36954 125 aaKnown RBP3.55□□□□□ -1.84
SMC1B-201ENST00000357450 PRIM2P49643 509 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 GZMMP51124 257 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 CDH13P55290 713 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 SELENOVP59797 346 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 ABATP80404 500 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 HSF1Q00613 529 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 RALGDSQ12967 914 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 SLC14A2Q15849 920 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 HKDC1Q2TB90 917 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 KRT71Q3SY84 523 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 HENMT1Q5T8I9 393 aaKnown RBP3.55□□□□□ -1.84
SMC1B-201ENST00000357450 SLC22A10Q63ZE4 541 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 FAM45BPQ6NSW5 357 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 RNF44Q7L0R7 432 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 NDUFAF7Q7L592 441 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 CPEB2Q7Z5Q1 589 aaKnown RBP3.55□□□□□ -1.84
SMC1B-201ENST00000357450 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.55□□□□□ -1.84
SMC1B-201ENST00000357450 YRDCQ86U90 279 aaKnown RBP3.55□□□□□ -1.84
SMC1B-201ENST00000357450 LRRC6Q86X45 466 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.55□□□□□ -1.84
SMC1B-201ENST00000357450 MIER2Q8N344 545 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 MPP5Q8N3R9 675 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 TTLQ8NG68 377 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 FAM45AQ8TCE6 357 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 KCTD4Q8WVF5 259 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 FAR1Q8WVX9 515 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 CYTH2Q99418 400 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 DPH2Q9BQC3 489 aaPredicted RBP3.55□□□□□ -1.84
SMC1B-201ENST00000357450 C1QTNF6Q9BXI9 259 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 SLC17A6Q9P2U8 582 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 VDAC3Q9Y277 283 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 TMEM184BQ9Y519 407 aaPredicted RBP3.55□□□□□ -1.84
SMC1B-201ENST00000357450 MED12Q93074 2177 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 A0A087WUV0 522 aaPredicted RBP3.55□□□□□ -1.84
SMC1B-201ENST00000357450 A0A1B0GTH9 108 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 POLR3GO15318 223 aaPredicted RBP3.55□□□□□ -1.84
SMC1B-201ENST00000357450 HTRA2O43464 458 aaPredicted RBP3.55□□□□□ -1.84
SMC1B-201ENST00000357450 PRKNO60260 465 aaPredicted RBP3.55□□□□□ -1.84
SMC1B-201ENST00000357450 GREM1O60565 184 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 SNX4O95219 450 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 NQO1P15559 274 aaKnown RBP3.55□□□□□ -1.84
SMC1B-201ENST00000357450 PGAM1P18669 254 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 CRABP2P29373 138 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 KIR2DL3P43628 341 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 DNASE1L1P49184 302 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 PSMD4P55036 377 aaKnown RBP3.55□□□□□ -1.84
SMC1B-201ENST00000357450 MANFP55145 182 aaKnown RBP3.55□□□□□ -1.84
SMC1B-201ENST00000357450 DPTQ07507 201 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 HSPB3Q12988 150 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 BIKQ13323 160 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 RIN1Q13671 783 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 METRNLQ641Q3 311 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 SLC9A4Q6AI14 798 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 ABRAXAS1Q6UWZ7 409 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 RIPOR1Q6ZS17 1223 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 LINC00528Q8N1L1 170 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 CREB3L4Q8TEY5 395 aa3.55□□□□□ -1.84
SMC1B-201ENST00000357450 EEF1AKMT1Q8WVE0 214 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms