RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 CD22P20273 847 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 KDELR2P33947 212 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 OR1E2P47887 323 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 VMACQ2NL98 169 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 ZNF783Q6ZMS7 281 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 KANSL1Q7Z3B3 1105 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 TCTE3Q8IZS6 198 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 COQ8AQ8NI60 647 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 SETD6Q8TBK2 473 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 GGHQ92820 318 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 SCRN2Q96FV2 425 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 HYLS1Q96M11 299 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 TINAGL1Q9GZM7 467 aaPredicted RBP8.93□□□□□ -0.98
SMG6-202ENST00000354901 TTYH1Q9H313 450 aaPredicted RBP8.93□□□□□ -0.98
SMG6-202ENST00000354901 REEP1Q9H902 201 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 PCDHGB1Q9Y5G3 927 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 V9GYH0 126 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 LOC105369274A0A096LPK9 316 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 LINC00587B1AMM8 73 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 NEDD8-MDP1E9PL57 170 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 CCNDBP1O95273 360 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 KCNK5O95279 499 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 C1SP09871 688 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 ACPPP15309 386 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 BDKRB1P46663 353 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 RRAS2P62070 204 aaPredicted RBP8.93□□□□□ -0.98
SMG6-202ENST00000354901 UAP1L1Q3KQV9 507 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 LRIF1Q5T3J3 769 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 LYPLAL1Q5VWZ2 237 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 C22orf39Q6P5X5 142 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 XKRXQ6PP77 449 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 GPR65Q8IYL9 337 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 OR4N4Q8N0Y3 316 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 C1orf52Q8N6N3 182 aaKnown RBP8.93□□□□□ -0.98
SMG6-202ENST00000354901 OR4K1Q8NGD4 311 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 UBTD2Q8WUN7 234 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 ASB11Q8WXH4 323 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 UPRTQ96BW1 309 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 CMTM7Q96FZ5 175 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 BARHL1Q9BZE3 327 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 IL21Q9HBE4 155 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 RDH14Q9HBH5 336 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 MLXQ9UH92 298 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 UBQLN2Q9UHD9 624 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 MGAT4BQ9UQ53 548 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 CCL26Q9Y258 94 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 CCDC88CQ9P219 2028 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 TRBV23-1A0A0A0MS06 115 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 SLC16A6O15403 523 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 LRRTM2O43300 516 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 GMDSO60547 372 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 SOCS5O75159 536 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 ETHE1O95571 254 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 CBX7O95931 251 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 SOD2P04179 222 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 ATP1B2P14415 290 aaPredicted RBP8.92□□□□□ -0.98
SMG6-202ENST00000354901 MAPK1P28482 360 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 DUOXA1Q1HG43 343 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 FRMPD2BQ6IN97 320 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 SHQ1Q6PI26 577 aaKnown RBP8.92□□□□□ -0.98
SMG6-202ENST00000354901 ZNF782Q6ZMW2 699 aaPredicted RBP8.92□□□□□ -0.98
SMG6-202ENST00000354901 TMEM25Q86YD3 366 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 GDPD1Q8N9F7 314 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 SLC12A9Q9BXP2 914 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 TPT1P8Q9HAU6 139 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 THUMPD1Q9NXG2 353 aaKnown RBP8.92□□□□□ -0.98
SMG6-202ENST00000354901 COPZ2Q9P299 210 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 SESN1Q9Y6P5 492 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 PRSS44E7EML9 344 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 GFRA2O00451 464 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 ORC5O43913 435 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 APOL3O95236 402 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 CYP17A1P05093 508 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 ACSM4P0C7M7 580 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 ZNF806P0C7X5 589 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 PRKAR1AP10644 381 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 CRATP43155 626 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 RORCP51449 518 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 RAB8AP61006 207 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 CAMK2GQ13555 558 aaPredicted RBP8.92□□□□□ -0.98
SMG6-202ENST00000354901 DOC2AQ14183 400 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 ZNF273Q14593 569 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 IER5LQ5T953 404 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 Q6ZNB5 142 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 TRILQ7L0X0 811 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 KRT74Q7RTS7 529 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 LRRC70Q7Z2Q7 622 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 ZZZ3Q8IYH5 903 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 CYB5D2Q8WUJ1 264 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 IL4I1Q96RQ9 567 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 TMEM121BQ9BXQ6 578 aaPredicted RBP8.92□□□□□ -0.98
SMG6-202ENST00000354901 MS4A12Q9NXJ0 267 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 HCN3Q9P1Z3 774 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 VPS29Q9UBQ0 182 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 FZD4Q9ULV1 537 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 PLCL2Q9UPR0 1127 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 KCNE1BA0A087WTH5 132 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 GTPBP1O00178 669 aaKnown RBP8.92□□□□□ -0.98
SMG6-202ENST00000354901 PLA2G10O15496 165 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 RGS11O94810 467 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms