RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 SLC22A14Q9Y267 594 aa14.5□□□□□ -0.09
DDX55-202ENST00000354291 TESMINQ9Y4I5 508 aa14.5□□□□□ -0.09
DDX55-202ENST00000354291 OARD1Q9Y530 152 aa14.5□□□□□ -0.09
DDX55-202ENST00000354291 NPEPPSL1A6NEC2 478 aa14.49□□□□□ -0.09
DDX55-202ENST00000354291 FAM187AA6NFU0 413 aa14.49□□□□□ -0.09
DDX55-202ENST00000354291 DEFB108AA8MXU0 73 aa14.49□□□□□ -0.09
DDX55-202ENST00000354291 SNPHO15079 494 aa14.49□□□□□ -0.09
DDX55-202ENST00000354291 B3GALT2O43825 422 aa14.49□□□□□ -0.09
DDX55-202ENST00000354291 CTNSO60931 367 aa14.49□□□□□ -0.09
DDX55-202ENST00000354291 STXBP1P61764 594 aaKnown RBP14.49□□□□□ -0.09
DDX55-202ENST00000354291 REEP5Q00765 189 aa14.49□□□□□ -0.09
DDX55-202ENST00000354291 POU4F1Q01851 419 aa14.49□□□□□ -0.09
DDX55-202ENST00000354291 TBL3Q12788 808 aaKnown RBP14.49□□□□□ -0.09
DDX55-202ENST00000354291 TOMM20Q15388 145 aa14.49□□□□□ -0.09
DDX55-202ENST00000354291 VASNQ6EMK4 673 aa14.49□□□□□ -0.09
DDX55-202ENST00000354291 FRA10AC1Q70Z53 315 aa14.49□□□□□ -0.09
DDX55-202ENST00000354291 HIPK1Q86Z02 1210 aa14.49□□□□□ -0.09
DDX55-202ENST00000354291 ZNF441Q8N8Z8 693 aa14.49□□□□□ -0.09
DDX55-202ENST00000354291 OR10G3Q8NGC4 313 aa14.49□□□□□ -0.09
DDX55-202ENST00000354291 SLC22A8Q8TCC7 542 aa14.49□□□□□ -0.09
DDX55-202ENST00000354291 SLC44A1Q8WWI5 657 aa14.49□□□□□ -0.09
DDX55-202ENST00000354291 CCT6BQ92526 530 aa14.49□□□□□ -0.09
DDX55-202ENST00000354291 CDKL2Q92772 493 aa14.49□□□□□ -0.09
DDX55-202ENST00000354291 SPACA9Q96E40 222 aaPredicted RBP14.49□□□□□ -0.09
DDX55-202ENST00000354291 WDYHV1Q96HA8 205 aa14.49□□□□□ -0.09
DDX55-202ENST00000354291 WFIKKN1Q96NZ8 548 aa14.49□□□□□ -0.09
DDX55-202ENST00000354291 MCMBPQ9BTE3 642 aa14.49□□□□□ -0.09
DDX55-202ENST00000354291 YAE1D1Q9NRH1 226 aa14.49□□□□□ -0.09
DDX55-202ENST00000354291 CNIH4Q9P003 139 aa14.49□□□□□ -0.09
DDX55-202ENST00000354291 TXNDC16Q9P2K2 825 aa14.49□□□□□ -0.09
DDX55-202ENST00000354291 COPS7AQ9UBW8 275 aa14.49□□□□□ -0.09
DDX55-202ENST00000354291 PYCARDQ9ULZ3 195 aa14.49□□□□□ -0.09
DDX55-202ENST00000354291 A0A087X1B8 175 aa14.48□□□□□ -0.09
DDX55-202ENST00000354291 RNF223E7ERA6 249 aa14.48□□□□□ -0.09
DDX55-202ENST00000354291 EIF3HO15372 352 aaKnown RBP eCLIP14.48□□□□□ -0.09
DDX55-202ENST00000354291 ERI3O43414 337 aaKnown RBP14.48□□□□□ -0.09
DDX55-202ENST00000354291 H2AFYO75367 372 aaKnown RBP14.48□□□□□ -0.09
DDX55-202ENST00000354291 ETHE1O95571 254 aa14.48□□□□□ -0.09
DDX55-202ENST00000354291 GNAZP19086 355 aa14.48□□□□□ -0.09
DDX55-202ENST00000354291 CPOXP36551 454 aa14.48□□□□□ -0.09
DDX55-202ENST00000354291 ID2Q02363 134 aa14.48□□□□□ -0.09
DDX55-202ENST00000354291 RCAN2Q14206 197 aa14.48□□□□□ -0.09
DDX55-202ENST00000354291 ZNF460Q14592 562 aa14.48□□□□□ -0.09
DDX55-202ENST00000354291 PLEKHM3Q6ZWE6 761 aa14.48□□□□□ -0.09
DDX55-202ENST00000354291 CYS1Q717R9 158 aa14.48□□□□□ -0.09
DDX55-202ENST00000354291 TMPRSS11BQ86T26 416 aa14.48□□□□□ -0.09
DDX55-202ENST00000354291 SPATA4Q8NEY3 305 aa14.48□□□□□ -0.09
DDX55-202ENST00000354291 ANKRD49Q8WVL7 239 aa14.48□□□□□ -0.09
DDX55-202ENST00000354291 ABTB1Q969K4 478 aaPredicted RBP14.48□□□□□ -0.09
DDX55-202ENST00000354291 GAL3ST3Q96A11 431 aa14.48□□□□□ -0.09
DDX55-202ENST00000354291 INTS12Q96CB8 462 aaKnown RBP14.48□□□□□ -0.09
DDX55-202ENST00000354291 TSPAN17Q96FV3 270 aa14.48□□□□□ -0.09
DDX55-202ENST00000354291 CSF3RQ99062 836 aa14.48□□□□□ -0.09
DDX55-202ENST00000354291 SFXN3Q9BWM7 321 aa14.48□□□□□ -0.09
DDX55-202ENST00000354291 CAPS2Q9BXY5 557 aa14.48□□□□□ -0.09
DDX55-202ENST00000354291 UGT2B28Q9BY64 529 aa14.48□□□□□ -0.09
DDX55-202ENST00000354291 DERL2Q9GZP9 239 aa14.48□□□□□ -0.09
DDX55-202ENST00000354291 ZNF226Q9NYT6 803 aa14.48□□□□□ -0.09
DDX55-202ENST00000354291 ADGRE2Q9UHX3 823 aa14.48□□□□□ -0.09
DDX55-202ENST00000354291 DOCK7Q96N67 2140 aa14.48□□□□□ -0.09
DDX55-202ENST00000354291 CYR61O00622 381 aa14.47□□□□□ -0.09
DDX55-202ENST00000354291 MC3RP41968 323 aa14.47□□□□□ -0.09
DDX55-202ENST00000354291 MSH2P43246 934 aa14.47□□□□□ -0.09
DDX55-202ENST00000354291 SLCO1A2P46721 670 aa14.47□□□□□ -0.09
DDX55-202ENST00000354291 PLA2G16P53816 162 aa14.47□□□□□ -0.09
DDX55-202ENST00000354291 FAM27E3Q08E93 113 aa14.47□□□□□ -0.09
DDX55-202ENST00000354291 CAPRIN1Q14444 709 aaKnown RBP14.47□□□□□ -0.09
DDX55-202ENST00000354291 TSNQ15631 228 aaKnown RBP14.47□□□□□ -0.09
DDX55-202ENST00000354291 DCST1Q5T197 706 aa14.47□□□□□ -0.09
DDX55-202ENST00000354291 LYPD8Q6UX82 237 aa14.47□□□□□ -0.09
DDX55-202ENST00000354291 KLHDC8AQ8IYD2 350 aa14.47□□□□□ -0.09
DDX55-202ENST00000354291 MEIOBQ8N635 442 aa14.47□□□□□ -0.09
DDX55-202ENST00000354291 TTLQ8NG68 377 aa14.47□□□□□ -0.09
DDX55-202ENST00000354291 ZNF721Q8TF20 911 aa14.47□□□□□ -0.09
DDX55-202ENST00000354291 RHBDF1Q96CC6 855 aa14.47□□□□□ -0.09
DDX55-202ENST00000354291 ZNF597Q96LX8 424 aa14.47□□□□□ -0.09
DDX55-202ENST00000354291 GNRHR2Q96P88 292 aa14.47□□□□□ -0.09
DDX55-202ENST00000354291 CPNE1Q99829 537 aa14.47□□□□□ -0.09
DDX55-202ENST00000354291 PIGQQ9BRB3 760 aa14.47□□□□□ -0.09
DDX55-202ENST00000354291 MED18Q9BUE0 208 aa14.47□□□□□ -0.09
DDX55-202ENST00000354291 DPH5Q9H2P9 285 aa14.47□□□□□ -0.09
DDX55-202ENST00000354291 SAYSD1Q9NPB0 183 aa14.47□□□□□ -0.09
DDX55-202ENST00000354291 MTO1Q9Y2Z2 717 aaKnown RBP14.47□□□□□ -0.09
DDX55-202ENST00000354291 CHCHD2Q9Y6H1 151 aaPredicted RBP14.47□□□□□ -0.09
DDX55-202ENST00000354291 SYNDIG1LA6NDD5 238 aa14.46□□□□□ -0.09
DDX55-202ENST00000354291 A8MXE2 369 aa14.46□□□□□ -0.09
DDX55-202ENST00000354291 LDB3O75112 727 aa14.46□□□□□ -0.09
DDX55-202ENST00000354291 WDR47O94967 919 aa14.46□□□□□ -0.09
DDX55-202ENST00000354291 GSTA2P09210 222 aa14.46□□□□□ -0.09
DDX55-202ENST00000354291 C1GALT1C1LP0DN25 315 aa14.46□□□□□ -0.09
DDX55-202ENST00000354291 CYP4B1P13584 511 aa14.46□□□□□ -0.09
DDX55-202ENST00000354291 GSTM2P28161 218 aa14.46□□□□□ -0.09
DDX55-202ENST00000354291 SERPINB3P29508 390 aa14.46□□□□□ -0.09
DDX55-202ENST00000354291 SSTR1P30872 391 aa14.46□□□□□ -0.09
DDX55-202ENST00000354291 HNRNPH1P31943 449 aaKnown RBP14.46□□□□□ -0.09
DDX55-202ENST00000354291 CDK9P50750 372 aaKnown RBP14.46□□□□□ -0.09
DDX55-202ENST00000354291 DIO3P55073 304 aa14.46□□□□□ -0.09
DDX55-202ENST00000354291 LIM2P55344 173 aa14.46□□□□□ -0.09
DDX55-202ENST00000354291 ATP5J2P56134 94 aa14.46□□□□□ -0.09
DDX55-202ENST00000354291 MRPS25P82663 173 aaKnown RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms