RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 MAT2BQ9NZL9 334 aa16.9■□□□□ 0.3
VHL-202ENST00000345392 ZNF106Q9H2Y7 1883 aaKnown RBP16.89■□□□□ 0.29
VHL-202ENST00000345392 A0A1W2PRB8 838 aa16.89■□□□□ 0.29
VHL-202ENST00000345392 ARRDC5A6NEK1 342 aa16.89■□□□□ 0.29
VHL-202ENST00000345392 NCR1O76036 304 aa16.89■□□□□ 0.29
VHL-202ENST00000345392 CD70P32970 193 aa16.89■□□□□ 0.29
VHL-202ENST00000345392 DSTNP60981 165 aa16.89■□□□□ 0.29
VHL-202ENST00000345392 IL18Q14116 193 aa16.89■□□□□ 0.29
VHL-202ENST00000345392 CCDC85BQ15834 202 aaPredicted RBP16.89■□□□□ 0.29
VHL-202ENST00000345392 ZNF730Q6ZMV8 503 aa16.89■□□□□ 0.29
VHL-202ENST00000345392 USP45Q70EL2 814 aa16.89■□□□□ 0.29
VHL-202ENST00000345392 NPAS4Q8IUM7 802 aa16.89■□□□□ 0.29
VHL-202ENST00000345392 LIX1LQ8IVB5 337 aa16.89■□□□□ 0.29
VHL-202ENST00000345392 OR2AP1Q8NGE2 309 aa16.89■□□□□ 0.29
VHL-202ENST00000345392 ASZ1Q8WWH4 475 aa16.89■□□□□ 0.29
VHL-202ENST00000345392 LRR1Q96L50 414 aa16.89■□□□□ 0.29
VHL-202ENST00000345392 LINC00597Q9H2U6 94 aa16.89■□□□□ 0.29
VHL-202ENST00000345392 MVB12BQ9H7P6 319 aa16.89■□□□□ 0.29
VHL-202ENST00000345392 ZNF334Q9HCZ1 680 aaPredicted RBP16.89■□□□□ 0.29
VHL-202ENST00000345392 SLC23A1Q9UHI7 598 aa16.89■□□□□ 0.29
VHL-202ENST00000345392 SH2B3Q9UQQ2 575 aa16.89■□□□□ 0.29
VHL-202ENST00000345392 MYOFQ9NZM1 2061 aa16.89■□□□□ 0.29
VHL-202ENST00000345392 THSD7BQ9C0I4 1608 aa16.89■□□□□ 0.29
VHL-202ENST00000345392 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.89■□□□□ 0.29
VHL-202ENST00000345392 NOS1APO75052 506 aaPredicted RBP16.89■□□□□ 0.29
VHL-202ENST00000345392 KLK1P06870 262 aa16.89■□□□□ 0.29
VHL-202ENST00000345392 SELPP16109 830 aa16.89■□□□□ 0.29
VHL-202ENST00000345392 IMPA1P29218 277 aa16.89■□□□□ 0.29
VHL-202ENST00000345392 PTPN5P54829 565 aa16.89■□□□□ 0.29
VHL-202ENST00000345392 WDR5P61964 334 aaKnown RBP16.89■□□□□ 0.29
VHL-202ENST00000345392 SHFQ7M4L6 423 aa16.89■□□□□ 0.29
VHL-202ENST00000345392 C11orf74Q86VG3 221 aa16.89■□□□□ 0.29
VHL-202ENST00000345392 C16orf78Q8WTQ4 265 aa16.89■□□□□ 0.29
VHL-202ENST00000345392 RAB8BQ92930 207 aa16.89■□□□□ 0.29
VHL-202ENST00000345392 MTERF3Q96E29 417 aa16.89■□□□□ 0.29
VHL-202ENST00000345392 LYSMD1Q96S90 227 aa16.89■□□□□ 0.29
VHL-202ENST00000345392 ING3Q9NXR8 418 aa16.89■□□□□ 0.29
VHL-202ENST00000345392 WASHC1A8K0Z3 465 aa16.88■□□□□ 0.29
VHL-202ENST00000345392 LYRM1O43325 122 aa16.88■□□□□ 0.29
VHL-202ENST00000345392 SGTAO43765 313 aa16.88■□□□□ 0.29
VHL-202ENST00000345392 GJA1P17302 382 aa16.88■□□□□ 0.29
VHL-202ENST00000345392 SPINT3P49223 89 aa16.88■□□□□ 0.29
VHL-202ENST00000345392 UBE3AQ05086 875 aa16.88■□□□□ 0.29
VHL-202ENST00000345392 TYW3Q6IPR3 259 aaKnown RBP16.88■□□□□ 0.29
VHL-202ENST00000345392 REEP3Q6NUK4 255 aa16.88■□□□□ 0.29
VHL-202ENST00000345392 PGBD2Q6P3X8 592 aa16.88■□□□□ 0.29
VHL-202ENST00000345392 MEX3DQ86XN8 651 aaKnown RBP16.88■□□□□ 0.29
VHL-202ENST00000345392 TMEM145Q8NBT3 493 aa16.88■□□□□ 0.29
VHL-202ENST00000345392 OR4D11Q8NGI4 311 aa16.88■□□□□ 0.29
VHL-202ENST00000345392 C19orf43Q9BQ61 176 aa16.88■□□□□ 0.29
VHL-202ENST00000345392 SORBS1Q9BX66 1292 aaKnown RBP16.88■□□□□ 0.29
VHL-202ENST00000345392 SMG9Q9H0W8 520 aaKnown RBP16.88■□□□□ 0.29
VHL-202ENST00000345392 ZDHHC6Q9H6R6 413 aa16.88■□□□□ 0.29
VHL-202ENST00000345392 GULP1Q9UBP9 304 aa16.88■□□□□ 0.29
VHL-202ENST00000345392 B4GALT6Q9UBX8 382 aa16.88■□□□□ 0.29
VHL-202ENST00000345392 NDOR1Q9UHB4 597 aa16.88■□□□□ 0.29
VHL-202ENST00000345392 PRRG1O14668 218 aa16.88■□□□□ 0.29
VHL-202ENST00000345392 KLHL18O94889 574 aa16.88■□□□□ 0.29
VHL-202ENST00000345392 RAB36O95755 333 aa16.88■□□□□ 0.29
VHL-202ENST00000345392 GSTM1P09488 218 aa16.88■□□□□ 0.29
VHL-202ENST00000345392 POU3F3P20264 500 aaPredicted RBP16.88■□□□□ 0.29
VHL-202ENST00000345392 IRS1P35568 1242 aa16.88■□□□□ 0.29
VHL-202ENST00000345392 FABP5Q01469 135 aa16.88■□□□□ 0.29
VHL-202ENST00000345392 LMAN2Q12907 356 aa16.88■□□□□ 0.29
VHL-202ENST00000345392 ELAVL2Q12926 359 aaKnown RBP16.88■□□□□ 0.29
VHL-202ENST00000345392 SYT14P1Q58G82 188 aa16.88■□□□□ 0.29
VHL-202ENST00000345392 TIGD3Q6B0B8 471 aa16.88■□□□□ 0.29
VHL-202ENST00000345392 MED27Q6P2C8 311 aa16.88■□□□□ 0.29
VHL-202ENST00000345392 DNAJB7Q7Z6W7 309 aaPredicted RBP16.88■□□□□ 0.29
VHL-202ENST00000345392 SLC7A13Q8TCU3 470 aa16.88■□□□□ 0.29
VHL-202ENST00000345392 C2orf15Q8WU43 125 aaKnown RBP16.88■□□□□ 0.29
VHL-202ENST00000345392 SLC38A5Q8WUX1 472 aa16.88■□□□□ 0.29
VHL-202ENST00000345392 APOBEC4Q8WW27 367 aaKnown RBP16.88■□□□□ 0.29
VHL-202ENST00000345392 METTL2AQ96IZ6 378 aaKnown RBP16.88■□□□□ 0.29
VHL-202ENST00000345392 QRFPRQ96P65 431 aa16.88■□□□□ 0.29
VHL-202ENST00000345392 SLC6A16Q9GZN6 736 aa16.88■□□□□ 0.29
VHL-202ENST00000345392 SUV39H2Q9H5I1 410 aa16.88■□□□□ 0.29
VHL-202ENST00000345392 PPP1R3EQ9H7J1 279 aa16.88■□□□□ 0.29
VHL-202ENST00000345392 CXorf36Q9H7Y0 433 aa16.88■□□□□ 0.29
VHL-202ENST00000345392 NIPAL2Q9H841 368 aa16.88■□□□□ 0.29
VHL-202ENST00000345392 MGAT4BQ9UQ53 548 aa16.88■□□□□ 0.29
VHL-202ENST00000345392 CDH23Q9H251 3354 aa16.88■□□□□ 0.29
VHL-202ENST00000345392 ANAPC1Q9H1A4 1944 aa16.88■□□□□ 0.29
VHL-202ENST00000345392 C5orf58C9J3I9 102 aa16.87■□□□□ 0.29
VHL-202ENST00000345392 NRG2O14511 850 aaPredicted RBP16.87■□□□□ 0.29
VHL-202ENST00000345392 CASKO14936 926 aa16.87■□□□□ 0.29
VHL-202ENST00000345392 CD79BP40259 229 aa16.87■□□□□ 0.29
VHL-202ENST00000345392 PIN1Q13526 163 aaPredicted RBP16.87■□□□□ 0.29
VHL-202ENST00000345392 KCNC3Q14003 757 aa16.87■□□□□ 0.29
VHL-202ENST00000345392 ACSM5Q6NUN0 579 aa16.87■□□□□ 0.29
VHL-202ENST00000345392 DEFB128Q7Z7B8 93 aa16.87■□□□□ 0.29
VHL-202ENST00000345392 DDX53Q86TM3 631 aaKnown RBP16.87■□□□□ 0.29
VHL-202ENST00000345392 HORMAD2Q8N7B1 307 aa16.87■□□□□ 0.29
VHL-202ENST00000345392 DCLRE1CQ96SD1 692 aaKnown RBP16.87■□□□□ 0.29
VHL-202ENST00000345392 DIMT1Q9UNQ2 313 aaKnown RBP16.87■□□□□ 0.29
VHL-202ENST00000345392 GREM1O60565 184 aa16.87■□□□□ 0.29
VHL-202ENST00000345392 PLOD3O60568 738 aa16.87■□□□□ 0.29
VHL-202ENST00000345392 H1F0P07305 194 aaKnown RBP16.87■□□□□ 0.29
VHL-202ENST00000345392 FAM157BP0CG42 384 aa16.87■□□□□ 0.29
VHL-202ENST00000345392 PRKAR1AP10644 381 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms