RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 KCNJ10P78508 379 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 SMAD3P84022 425 aaKnown RBP7.74□□□□□ -1.17
ATG4A-201ENST00000343524 TIAL1Q01085 375 aaKnown RBP eCLIP7.74□□□□□ -1.17
ATG4A-201ENST00000343524 IL10RBQ08334 325 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 GK2Q14410 553 aaPredicted RBP7.74□□□□□ -1.17
ATG4A-201ENST00000343524 ABRAXAS2Q15018 415 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 PTGES3Q15185 160 aaKnown RBP7.74□□□□□ -1.17
ATG4A-201ENST00000343524 P2RY14Q15391 338 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 DUOXA1Q1HG43 343 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 MICBQ29980 383 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 MPEG1Q2M385 716 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 HFEQ30201 348 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 SLC10A6Q3KNW5 377 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 IFI44LQ53G44 452 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 NOMO2Q5JPE7 1267 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 ZNF648Q5T619 568 aaPredicted RBP7.74□□□□□ -1.17
ATG4A-201ENST00000343524 PAQR3Q6TCH7 311 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 CASP12Q6UXS9 341 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 NLRC3Q7RTR2 1065 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 GOLGA7Q7Z5G4 137 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 KIAA0907Q7Z7F0 614 aaPredicted RBP7.74□□□□□ -1.17
ATG4A-201ENST00000343524 DENND1CQ8IV53 801 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 C12orf45Q8N5I9 185 aaPredicted RBP7.74□□□□□ -1.17
ATG4A-201ENST00000343524 OR52B6Q8NGF0 335 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 OR4L1Q8NH43 312 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 OR52N1Q8NH53 320 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 OR52P1PQ8NH57 321 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 OR56B4Q8NH76 319 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 MOSPD2Q8NHP6 518 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 ELP5Q8TE02 316 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 C11orf24Q96F05 449 aaPredicted RBP7.74□□□□□ -1.17
ATG4A-201ENST00000343524 IMP4Q96G21 291 aaKnown RBP7.74□□□□□ -1.17
ATG4A-201ENST00000343524 MYO19Q96H55 970 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 ZBED3Q96IU2 234 aaPredicted RBP7.74□□□□□ -1.17
ATG4A-201ENST00000343524 FAM193BQ96PV7 902 aaPredicted RBP7.74□□□□□ -1.17
ATG4A-201ENST00000343524 OR4K3Q96R72 315 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 ATF6BQ99941 703 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 GAL3ST1Q99999 423 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 SPATA5L1Q9BVQ7 753 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 COLEC11Q9BWP8 271 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 EPHX3Q9H6B9 360 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 C8orf33Q9H7E9 229 aaPredicted RBP7.74□□□□□ -1.17
ATG4A-201ENST00000343524 AGO3Q9H9G7 860 aaKnown RBP7.74□□□□□ -1.17
ATG4A-201ENST00000343524 UCK1Q9HA47 277 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 NMUR1Q9HB89 426 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 POLE3Q9NRF9 147 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 OSER1Q9NX31 292 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 ZNF624Q9P2J8 865 aaPredicted RBP7.74□□□□□ -1.17
ATG4A-201ENST00000343524 SEC14L3Q9UDX4 400 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 FTSJ1Q9UET6 329 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 CCL27Q9Y4X3 112 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 PPP2R3BQ9Y5P8 575 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 GBF1Q92538 1859 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 PLXNA1Q9UIW2 1896 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 OTOFQ9HC10 1997 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 TRDV1A0A1B0GX56 115 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 TMEM129A0AVI4 362 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 TRABD2BA6NFA1 517 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 MAGEB17A8MXT2 336 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 C2orf74A8MZ97 194 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 TEX46H3BTG2 121 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 CLIC1O00299 241 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 CDC7O00311 574 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 SULT1C2O00338 296 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 SMAD6O43541 496 aaKnown RBP7.74□□□□□ -1.17
ATG4A-201ENST00000343524 GPR37L1O60883 481 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 ULK1O75385 1050 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 AQP8O94778 261 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 KCNK5O95279 499 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 ADAP00813 363 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 TCRBP04435 133 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 INHAP05111 366 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 FGF1P05230 155 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 GIPP09681 153 aaPredicted RBP7.74□□□□□ -1.17
ATG4A-201ENST00000343524 HIST1H2AGP0C0S8 130 aaPredicted RBP7.74□□□□□ -1.17
ATG4A-201ENST00000343524 CD46P15529 392 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 PVALBP20472 110 aaPredicted RBP7.74□□□□□ -1.17
ATG4A-201ENST00000343524 HIST1H2ADP20671 130 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 HOXC13P31276 330 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 CCR1P32246 355 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 PCGF2P35227 344 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 RFC3P40938 356 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 CXCR3P49682 368 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 AGTR2P50052 363 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 ARHGDIBP52566 201 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 RAP2BP61225 183 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 PITX1P78337 314 aaPredicted RBP7.74□□□□□ -1.17
ATG4A-201ENST00000343524 PRKCZQ05513 592 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 TPBGQ13641 420 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 CHRNA6Q15825 494 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 OCLNQ16625 522 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 CRTC2Q53ET0 693 aaPredicted RBP7.74□□□□□ -1.17
ATG4A-201ENST00000343524 TCTE1Q5JU00 501 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 DGKKQ5KSL6 1271 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 SLC22A10Q63ZE4 541 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 HIST2H2AA3Q6FI13 130 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 PYHIN1Q6K0P9 492 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 NOTUMQ6P988 496 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 CD200R1LQ6Q8B3 271 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 UQCC3Q6UW78 93 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms