RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 VAC14Q08AM6 782 aa16.33■□□□□ 0.2
CLDN4-201ENST00000340958 PUM1Q14671 1186 aaKnown RBP eCLIP16.33■□□□□ 0.2
CLDN4-201ENST00000340958 BHLHB9Q6PI77 547 aa16.33■□□□□ 0.2
CLDN4-201ENST00000340958 TMEM107Q6UX40 140 aa16.33■□□□□ 0.2
CLDN4-201ENST00000340958 C10orf111Q8N326 155 aa16.33■□□□□ 0.2
CLDN4-201ENST00000340958 ARHGEF39Q8N4T4 335 aa16.33■□□□□ 0.2
CLDN4-201ENST00000340958 SPATA9Q9BWV2 254 aa16.33■□□□□ 0.2
CLDN4-201ENST00000340958 ZCCHC3Q9NUD5 404 aaKnown RBP16.33■□□□□ 0.2
CLDN4-201ENST00000340958 MAU2Q9Y6X3 613 aa16.33■□□□□ 0.2
CLDN4-201ENST00000340958 V9GYQ6 96 aa16.33■□□□□ 0.2
CLDN4-201ENST00000340958 SPTBN2O15020 2390 aa16.33■□□□□ 0.2
CLDN4-201ENST00000340958 UNC13CQ8NB66 2214 aa16.33■□□□□ 0.2
CLDN4-201ENST00000340958 DHRS12A0PJE2 317 aa16.32■□□□□ 0.2
CLDN4-201ENST00000340958 LDB3O75112 727 aa16.32■□□□□ 0.2
CLDN4-201ENST00000340958 KCNK5O95279 499 aa16.32■□□□□ 0.2
CLDN4-201ENST00000340958 C8BP07358 591 aa16.32■□□□□ 0.2
CLDN4-201ENST00000340958 ANKRD34CP0C6C1 535 aa16.32■□□□□ 0.2
CLDN4-201ENST00000340958 ETFAP13804 333 aa16.32■□□□□ 0.2
CLDN4-201ENST00000340958 IL10P22301 178 aa16.32■□□□□ 0.2
CLDN4-201ENST00000340958 PTGER1P34995 402 aa16.32■□□□□ 0.2
CLDN4-201ENST00000340958 GZMMP51124 257 aa16.32■□□□□ 0.2
CLDN4-201ENST00000340958 FOLH1Q04609 750 aa16.32■□□□□ 0.2
CLDN4-201ENST00000340958 FADDQ13158 208 aa16.32■□□□□ 0.2
CLDN4-201ENST00000340958 SLC13A2Q13183 592 aa16.32■□□□□ 0.2
CLDN4-201ENST00000340958 VMACQ2NL98 169 aa16.32■□□□□ 0.2
CLDN4-201ENST00000340958 GCNT6Q5T4J0 391 aa16.32■□□□□ 0.2
CLDN4-201ENST00000340958 CPZQ66K79 652 aa16.32■□□□□ 0.2
CLDN4-201ENST00000340958 C6orf120Q7Z4R8 191 aa16.32■□□□□ 0.2
CLDN4-201ENST00000340958 OR9A2Q8NGT5 310 aa16.32■□□□□ 0.2
CLDN4-201ENST00000340958 ADAMTS18Q8TE60 1221 aa16.32■□□□□ 0.2
CLDN4-201ENST00000340958 MYCBPQ99417 103 aaPredicted RBP16.32■□□□□ 0.2
CLDN4-201ENST00000340958 CDC14AQ9UNH5 594 aa16.32■□□□□ 0.2
CLDN4-201ENST00000340958 AP4S1Q9Y587 144 aa16.32■□□□□ 0.2
CLDN4-201ENST00000340958 RP1P56715 2156 aa16.32■□□□□ 0.2
CLDN4-201ENST00000340958 SPEGQ15772 3267 aa16.31■□□□□ 0.2
CLDN4-201ENST00000340958 A0A1W2PS29 197 aa16.31■□□□□ 0.2
CLDN4-201ENST00000340958 TCRBV3S1A0A5B6 114 aa16.31■□□□□ 0.2
CLDN4-201ENST00000340958 H0YIG0 161 aa16.31■□□□□ 0.2
CLDN4-201ENST00000340958 CYR61O00622 381 aa16.31■□□□□ 0.2
CLDN4-201ENST00000340958 CLDN4O14493 209 aa16.31■□□□□ 0.2
CLDN4-201ENST00000340958 CD59P13987 128 aa16.31■□□□□ 0.2
CLDN4-201ENST00000340958 PORP16435 677 aaPredicted RBP16.31■□□□□ 0.2
CLDN4-201ENST00000340958 PPP2R1BP30154 601 aa16.31■□□□□ 0.2
CLDN4-201ENST00000340958 ARSFP54793 590 aa16.31■□□□□ 0.2
CLDN4-201ENST00000340958 PRR5P85299 388 aa16.31■□□□□ 0.2
CLDN4-201ENST00000340958 CLPPQ16740 277 aaPredicted RBP16.31■□□□□ 0.2
CLDN4-201ENST00000340958 COX20Q5RI15 118 aa16.31■□□□□ 0.2
CLDN4-201ENST00000340958 PPWD1Q96BP3 646 aaKnown RBP16.31■□□□□ 0.2
CLDN4-201ENST00000340958 NEURL3Q96EH8 262 aa16.31■□□□□ 0.2
CLDN4-201ENST00000340958 GORASP2Q9H8Y8 452 aa16.31■□□□□ 0.2
CLDN4-201ENST00000340958 C3orf14Q9HBI5 128 aa16.31■□□□□ 0.2
CLDN4-201ENST00000340958 SIRT3Q9NTG7 399 aaPredicted RBP16.31■□□□□ 0.2
CLDN4-201ENST00000340958 PCNX2A6NKB5 2137 aa16.31■□□□□ 0.2
CLDN4-201ENST00000340958 NUP214P35658 2090 aaPredicted RBP16.31■□□□□ 0.2
CLDN4-201ENST00000340958 FGF17O60258 216 aa16.31■□□□□ 0.2
CLDN4-201ENST00000340958 B4GALT2O60909 372 aa16.31■□□□□ 0.2
CLDN4-201ENST00000340958 CREG1O75629 220 aa16.31■□□□□ 0.2
CLDN4-201ENST00000340958 CDC123O75794 336 aaPredicted RBP16.31■□□□□ 0.2
CLDN4-201ENST00000340958 GPR75O95800 540 aa16.31■□□□□ 0.2
CLDN4-201ENST00000340958 NUDT7P0C024 238 aa16.31■□□□□ 0.2
CLDN4-201ENST00000340958 CPMP14384 443 aa16.31■□□□□ 0.2
CLDN4-201ENST00000340958 SLC7A1P30825 629 aa16.31■□□□□ 0.2
CLDN4-201ENST00000340958 STX4Q12846 297 aa16.31■□□□□ 0.2
CLDN4-201ENST00000340958 FXNQ16595 210 aa16.31■□□□□ 0.2
CLDN4-201ENST00000340958 SYT16Q17RD7 645 aa16.31■□□□□ 0.2
CLDN4-201ENST00000340958 CCDC157Q569K6 752 aa16.31■□□□□ 0.2
CLDN4-201ENST00000340958 MTX3Q5HYI7 312 aa16.31■□□□□ 0.2
CLDN4-201ENST00000340958 PRAMEF17Q5VTA0 474 aa16.31■□□□□ 0.2
CLDN4-201ENST00000340958 SAXO2Q658L1 398 aa16.31■□□□□ 0.2
CLDN4-201ENST00000340958 TNFAIP8L2Q6P589 184 aaPredicted RBP16.31■□□□□ 0.2
CLDN4-201ENST00000340958 ARHGAP22Q7Z5H3 698 aa16.31■□□□□ 0.2
CLDN4-201ENST00000340958 ZZZ3Q8IYH5 903 aa16.31■□□□□ 0.2
CLDN4-201ENST00000340958 C11orf65Q8NCR3 313 aa16.31■□□□□ 0.2
CLDN4-201ENST00000340958 ADCY4Q8NFM4 1077 aa16.31■□□□□ 0.2
CLDN4-201ENST00000340958 SUN3Q8TAQ9 357 aa16.31■□□□□ 0.2
CLDN4-201ENST00000340958 CANT1Q8WVQ1 401 aa16.31■□□□□ 0.2
CLDN4-201ENST00000340958 MAL2Q969L2 176 aa16.31■□□□□ 0.2
CLDN4-201ENST00000340958 MOAP1Q96BY2 351 aa16.31■□□□□ 0.2
CLDN4-201ENST00000340958 ZNF501Q96CX3 271 aaPredicted RBP16.31■□□□□ 0.2
CLDN4-201ENST00000340958 ZNF681Q96N22 645 aa16.31■□□□□ 0.2
CLDN4-201ENST00000340958 OR6C1Q96RD1 312 aa16.31■□□□□ 0.2
CLDN4-201ENST00000340958 CLK4Q9HAZ1 481 aaKnown RBP16.31■□□□□ 0.2
CLDN4-201ENST00000340958 DHCR7Q9UBM7 475 aaKnown RBP16.31■□□□□ 0.2
CLDN4-201ENST00000340958 ANAPC2Q9UJX6 822 aa16.31■□□□□ 0.2
CLDN4-201ENST00000340958 GMEB1Q9Y692 573 aa16.31■□□□□ 0.2
CLDN4-201ENST00000340958 ASXL3Q9C0F0 2248 aa16.31■□□□□ 0.2
CLDN4-201ENST00000340958 CACNA1AO00555 2505 aa16.31■□□□□ 0.2
CLDN4-201ENST00000340958 MYOCOSA0A1B0GUC4 107 aa16.3■□□□□ 0.2
CLDN4-201ENST00000340958 ZNF749O43361 778 aa16.3■□□□□ 0.2
CLDN4-201ENST00000340958 OR10H2O60403 315 aa16.3■□□□□ 0.2
CLDN4-201ENST00000340958 MSL3P1P0C860 447 aa16.3■□□□□ 0.2
CLDN4-201ENST00000340958 NT5EP21589 574 aa16.3■□□□□ 0.2
CLDN4-201ENST00000340958 CSTF2P33240 577 aaKnown RBP eCLIP16.3■□□□□ 0.2
CLDN4-201ENST00000340958 MC3RP41968 323 aa16.3■□□□□ 0.2
CLDN4-201ENST00000340958 DSTNP60981 165 aa16.3■□□□□ 0.2
CLDN4-201ENST00000340958 RPS26P62854 115 aaKnown RBP16.3■□□□□ 0.2
CLDN4-201ENST00000340958 DUSP2Q05923 314 aa16.3■□□□□ 0.2
CLDN4-201ENST00000340958 LRRC23Q53EV4 343 aaPredicted RBP16.3■□□□□ 0.2
CLDN4-201ENST00000340958 TBCELQ5QJ74 424 aa16.3■□□□□ 0.2
CLDN4-201ENST00000340958 CEACAM20Q6UY09 585 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms