RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 PIK3CBP42338 1070 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 MAGEA3P43357 314 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 CAMK1Q14012 370 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 C22orf39Q6P5X5 142 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 CNIH2Q6PI25 160 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 SHQ1Q6PI26 577 aaKnown RBP15.38■□□□□ 0.05
NPHP3-201ENST00000337331 ISCA2Q86U28 154 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 JAZF1Q86VZ6 243 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 REM2Q8IYK8 340 aaPredicted RBP15.38■□□□□ 0.05
NPHP3-201ENST00000337331 KRTCAP2Q8N6L1 136 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 TNFAIP8L1Q8WVP5 186 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 YIPF6Q96EC8 236 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 CAMK1GQ96NX5 476 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 FUZQ9BT04 418 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 PIGUQ9H490 435 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 MRPS30Q9NP92 439 aaKnown RBP15.38■□□□□ 0.05
NPHP3-201ENST00000337331 TBC1D24Q9ULP9 559 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 DLGAP4Q9Y2H0 992 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 SLC45A1Q9Y2W3 748 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 EDN1P05305 212 aa15.37■□□□□ 0.05
NPHP3-201ENST00000337331 DRD5P21918 477 aa15.37■□□□□ 0.05
NPHP3-201ENST00000337331 ALAS2P22557 587 aa15.37■□□□□ 0.05
NPHP3-201ENST00000337331 TRIM23P36406 574 aa15.37■□□□□ 0.05
NPHP3-201ENST00000337331 MASP1P48740 699 aa15.37■□□□□ 0.05
NPHP3-201ENST00000337331 GATMP50440 423 aa15.37■□□□□ 0.05
NPHP3-201ENST00000337331 SMYD5Q6GMV2 418 aa15.37■□□□□ 0.05
NPHP3-201ENST00000337331 BTN2A1Q7KYR7 527 aa15.37■□□□□ 0.05
NPHP3-201ENST00000337331 OR8J3Q8NGG0 315 aa15.37■□□□□ 0.05
NPHP3-201ENST00000337331 CREB3L1Q96BA8 519 aa15.37■□□□□ 0.05
NPHP3-201ENST00000337331 SRMSQ9H3Y6 488 aa15.37■□□□□ 0.05
NPHP3-201ENST00000337331 P2RX2Q9UBL9 471 aa15.37■□□□□ 0.05
NPHP3-201ENST00000337331 TEX13CA0A0J9YWL9 993 aa15.37■□□□□ 0.05
NPHP3-201ENST00000337331 TLX2O43763 284 aaPredicted RBP15.37■□□□□ 0.05
NPHP3-201ENST00000337331 CD68P34810 354 aaPredicted RBP15.37■□□□□ 0.05
NPHP3-201ENST00000337331 ACTR1BP42025 376 aa15.37■□□□□ 0.05
NPHP3-201ENST00000337331 OR1E2P47887 323 aa15.37■□□□□ 0.05
NPHP3-201ENST00000337331 ACTR1AP61163 376 aa15.37■□□□□ 0.05
NPHP3-201ENST00000337331 RING1Q06587 406 aa15.37■□□□□ 0.05
NPHP3-201ENST00000337331 KEAP1Q14145 624 aa15.37■□□□□ 0.05
NPHP3-201ENST00000337331 DUSP6Q16828 381 aa15.37■□□□□ 0.05
NPHP3-201ENST00000337331 ZNF789Q5FWF6 425 aa15.37■□□□□ 0.05
NPHP3-201ENST00000337331 KANK2Q63ZY3 851 aa15.37■□□□□ 0.05
NPHP3-201ENST00000337331 NOXRED1Q6NXP6 359 aa15.37■□□□□ 0.05
NPHP3-201ENST00000337331 CRTC1Q6UUV9 634 aa15.37■□□□□ 0.05
NPHP3-201ENST00000337331 PDZD9Q8IXQ8 264 aa15.37■□□□□ 0.05
NPHP3-201ENST00000337331 OR10H5Q8NGA6 315 aa15.37■□□□□ 0.05
NPHP3-201ENST00000337331 TRAF4Q9BUZ4 470 aaPredicted RBP15.37■□□□□ 0.05
NPHP3-201ENST00000337331 GPR62Q9BZJ7 368 aa15.37■□□□□ 0.05
NPHP3-201ENST00000337331 ABCD2Q9UBJ2 740 aa15.37■□□□□ 0.05
NPHP3-201ENST00000337331 SARDHQ9UL12 918 aa15.37■□□□□ 0.05
NPHP3-201ENST00000337331 COCHO43405 550 aa15.37■□□□□ 0.05
NPHP3-201ENST00000337331 ZNF623O75123 536 aa15.37■□□□□ 0.05
NPHP3-201ENST00000337331 BCKDHAP12694 445 aa15.37■□□□□ 0.05
NPHP3-201ENST00000337331 JUPP14923 745 aa15.37■□□□□ 0.05
NPHP3-201ENST00000337331 RCAN2Q14206 197 aa15.37■□□□□ 0.05
NPHP3-201ENST00000337331 SLC30A6Q6NXT4 461 aa15.37■□□□□ 0.05
NPHP3-201ENST00000337331 WASH2PQ6VEQ5 465 aa15.37■□□□□ 0.05
NPHP3-201ENST00000337331 RNF130Q86XS8 419 aa15.37■□□□□ 0.05
NPHP3-201ENST00000337331 SAMD14Q8IZD0 417 aaPredicted RBP15.37■□□□□ 0.05
NPHP3-201ENST00000337331 TMEM145Q8NBT3 493 aa15.37■□□□□ 0.05
NPHP3-201ENST00000337331 MBOAT4Q96T53 435 aa15.37■□□□□ 0.05
NPHP3-201ENST00000337331 GSX2Q9BZM3 304 aa15.37■□□□□ 0.05
NPHP3-201ENST00000337331 XKR8Q9H6D3 395 aa15.37■□□□□ 0.05
NPHP3-201ENST00000337331 RHCGQ9UBD6 479 aa15.37■□□□□ 0.05
NPHP3-201ENST00000337331 WNT6Q9Y6F9 365 aa15.37■□□□□ 0.05
NPHP3-201ENST00000337331 UPK3BL1B0FP48 263 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 UPK3BL2E5RIL1 263 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 GPR32O75388 356 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 CH25HO95992 272 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 TBCEQ15813 527 aaPredicted RBP15.36■□□□□ 0.05
NPHP3-201ENST00000337331 AANATQ16613 207 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 ATAT1Q5SQI0 421 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 OR6K6Q8NGW6 343 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 LHFPL5Q8TAF8 219 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 RELTQ969Z4 430 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 RGMAQ96B86 450 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 NINQ8N4C6 2090 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 CICQ96RK0 1608 aaPredicted RBP15.36■□□□□ 0.05
NPHP3-201ENST00000337331 NARSO43776 548 aaKnown RBP15.36■□□□□ 0.05
NPHP3-201ENST00000337331 RP2O75695 350 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 C6orf47O95873 294 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 PEPDP12955 493 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 FOSL2P15408 326 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 VIPR1P32241 457 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 COL28A1Q2UY09 1125 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 OLFML2AQ68BL7 652 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 ZFAND4Q86XD8 727 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 RFT1Q96AA3 541 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 GAL3ST1Q99999 423 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 BIN3Q9NQY0 253 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 FBXL12Q9NXK8 326 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 ZNF69Q9UC07 566 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 ZNF175Q9Y473 711 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 DUXAA6NLW8 204 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 PRAMEF12O95522 483 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 CYP17A1P05093 508 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 CCND3P30281 292 aaPredicted RBP15.36■□□□□ 0.05
NPHP3-201ENST00000337331 GHRHRQ02643 423 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 GRIN2CQ14957 1233 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 OR4D1Q15615 310 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms