RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 DHCR7Q9UBM7 475 aaKnown RBP1.35□□□□□ -2.19
LINC00643-201ENST00000334389 MALT1Q9UDY8 824 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 VTI1BQ9UEU0 232 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 TRHDEQ9UKU6 1024 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 ICKQ9UPZ9 632 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 B3GALT5Q9Y2C3 310 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 TBL2Q9Y4P3 447 aaKnown RBP1.35□□□□□ -2.19
LINC00643-201ENST00000334389 CHCHD2Q9Y6H1 151 aaPredicted RBP1.35□□□□□ -2.19
LINC00643-201ENST00000334389 ZFHX3Q15911 3703 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 EYSQ5T1H1 3165 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 PTPRQQ9UMZ3 2332 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 A0A087WV62 115 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 TRGV8A0A0C4DH27 118 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 A0A0G2JLM5 398 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 URADA6NGE7 173 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 M0R1W7 72 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 BTN3A1O00481 513 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 HNRNPDLO14979 420 aaKnown RBP1.35□□□□□ -2.19
LINC00643-201ENST00000334389 INSIG1O15503 277 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 CCNT2O60583 730 aaKnown RBP1.35□□□□□ -2.19
LINC00643-201ENST00000334389 USO1O60763 962 aaKnown RBP1.35□□□□□ -2.19
LINC00643-201ENST00000334389 ERAL1O75616 437 aaKnown RBP1.35□□□□□ -2.19
LINC00643-201ENST00000334389 CBR3O75828 277 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 VIPP01282 170 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 AMBPP02760 352 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 FUCA1P04066 466 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 CD3EP07766 207 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 FAM153BP0C7A2 387 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 EBLN1P0CF75 366 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 UGT2B7P16662 529 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 TGFBR2P37173 567 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 PTGDSP41222 190 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 EIF1P41567 113 aaKnown RBP1.35□□□□□ -2.19
LINC00643-201ENST00000334389 LMO4P61968 165 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 OLR1P78380 273 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 HNRNPUQ00839 825 aaKnown RBP eCLIP1.35□□□□□ -2.19
LINC00643-201ENST00000334389 GLO1Q04760 184 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 ZNF844Q08AG5 666 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 GPR18Q14330 331 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 PDK2Q15119 407 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 CDSNQ15517 529 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 TAF1AQ15573 450 aaPredicted RBP1.35□□□□□ -2.19
LINC00643-201ENST00000334389 HIF1AQ16665 826 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 ANKDD1AQ495B1 522 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 DEPDC1Q5TB30 811 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 ZNF691Q5VV52 312 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 NCAPH2Q6IBW4 605 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 FAM131AQ6UXB0 335 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 ZAR1Q86SH2 424 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 SERPINA9Q86WD7 417 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 RPS19BP1Q86WX3 136 aaKnown RBP1.35□□□□□ -2.19
LINC00643-201ENST00000334389 ZNF547Q8IVP9 402 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 TCAIMQ8N3R3 496 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 APCDD1LQ8NCL9 501 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 NPEPL1Q8NDH3 523 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 PIBF1Q8WXW3 757 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 RDH5Q92781 318 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 MIEF2Q96C03 454 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 DHTKD1Q96HY7 919 aaPredicted RBP1.35□□□□□ -2.19
LINC00643-201ENST00000334389 FAM227BQ96M60 508 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 BPIFA3Q9BQP9 254 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 HAUS8Q9BT25 410 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 PDCL3Q9H2J4 239 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 TIGARQ9NQ88 270 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 FBXO34Q9NWN3 711 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 LYARQ9NX58 379 aaKnown RBP1.35□□□□□ -2.19
LINC00643-201ENST00000334389 IFT80Q9P2H3 777 aaPredicted RBP1.35□□□□□ -2.19
LINC00643-201ENST00000334389 SPRR3Q9UBC9 169 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 HESX1Q9UBX0 185 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 TBC1D29Q9UFV1 150 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 CRCT1Q9UGL9 99 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 SLC25A15Q9Y619 301 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 KPTNQ9Y664 436 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 PMF1-BGLAPU3KQ54 211 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 TEX48A0A1B0GUV7 120 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 A0A1W2PNR3 127 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 CPED1A4D0V7 1026 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 TMEM202A6NGA9 273 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 H3BUA1 57 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 F2RL2O00254 374 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 SEC14L5O43304 696 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 CYTIPO60759 359 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 TBCAO75347 108 aaKnown RBP1.34□□□□□ -2.19
LINC00643-201ENST00000334389 OR4Q2P0C623 313 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 EPB41P11171 864 aaKnown RBP1.34□□□□□ -2.19
LINC00643-201ENST00000334389 ITGAMP11215 1152 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 CCDC130P13994 396 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 EEF1GP26641 437 aaKnown RBP1.34□□□□□ -2.19
LINC00643-201ENST00000334389 MAOBP27338 520 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 EPHA3P29320 983 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 CASP1P29466 404 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 TTKP33981 857 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 ADRA1AP35348 466 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 CCT6AP40227 531 aaKnown RBP1.34□□□□□ -2.19
LINC00643-201ENST00000334389 GLRBP48167 497 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 NUMBP49757 651 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 DSCR4P56555 118 aaPredicted RBP1.34□□□□□ -2.19
LINC00643-201ENST00000334389 RAC1P63000 192 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 DGCR2P98153 550 aa1.34□□□□□ -2.19
LINC00643-201ENST00000334389 MYBPC1Q00872 1141 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms