RNA–Protein interactions for RNA: ENST00000323833.12

TSFM-201, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSFM, Length 1,218 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-201ENST00000323833 NOXRED1Q6NXP6 359 aa14.38□□□□□ -0.11
TSFM-201ENST00000323833 TUBA3EQ6PEY2 450 aa14.38□□□□□ -0.11
TSFM-201ENST00000323833 C16orf47Q6ZP98 133 aaPredicted RBP14.38□□□□□ -0.11
TSFM-201ENST00000323833 ZNF781Q8N8C0 355 aa14.38□□□□□ -0.11
TSFM-201ENST00000323833 RIT1Q92963 219 aa14.38□□□□□ -0.11
TSFM-201ENST00000323833 KLHL29Q96CT2 875 aa14.38□□□□□ -0.11
TSFM-201ENST00000323833 PELOQ9BRX2 385 aaKnown RBP14.38□□□□□ -0.11
TSFM-201ENST00000323833 CNPPD1Q9BV87 410 aa14.38□□□□□ -0.11
TSFM-201ENST00000323833 LRTM1Q9HBL6 345 aa14.38□□□□□ -0.11
TSFM-201ENST00000323833 C1orf109Q9NX04 203 aa14.38□□□□□ -0.11
TSFM-201ENST00000323833 ABI3Q9P2A4 366 aa14.38□□□□□ -0.11
TSFM-201ENST00000323833 GIMAP2Q9UG22 337 aa14.38□□□□□ -0.11
TSFM-201ENST00000323833 PCDHGA10Q9Y5H3 936 aa14.38□□□□□ -0.11
TSFM-201ENST00000323833 TMEM200CA6NKL6 621 aa14.37□□□□□ -0.11
TSFM-201ENST00000323833 NPIPB8E9PQR5 432 aa14.37□□□□□ -0.11
TSFM-201ENST00000323833 HAX1O00165 279 aa14.37□□□□□ -0.11
TSFM-201ENST00000323833 LSM1O15116 133 aaKnown RBP14.37□□□□□ -0.11
TSFM-201ENST00000323833 SKAP2O75563 359 aaPredicted RBP14.37□□□□□ -0.11
TSFM-201ENST00000323833 CT62P0C5K7 136 aa14.37□□□□□ -0.11
TSFM-201ENST00000323833 CPMP14384 443 aa14.37□□□□□ -0.11
TSFM-201ENST00000323833 DRD2P14416 443 aa14.37□□□□□ -0.11
TSFM-201ENST00000323833 PORP16435 677 aaPredicted RBP14.37□□□□□ -0.11
TSFM-201ENST00000323833 PTGER1P34995 402 aa14.37□□□□□ -0.11
TSFM-201ENST00000323833 FEN1P39748 380 aaKnown RBP14.37□□□□□ -0.11
TSFM-201ENST00000323833 CD96P40200 585 aa14.37□□□□□ -0.11
TSFM-201ENST00000323833 SLC18A1P54219 525 aa14.37□□□□□ -0.11
TSFM-201ENST00000323833 ERVK-8P63133 956 aa14.37□□□□□ -0.11
TSFM-201ENST00000323833 ZNF763Q0D2J5 394 aa14.37□□□□□ -0.11
TSFM-201ENST00000323833 C2orf80Q0P641 193 aa14.37□□□□□ -0.11
TSFM-201ENST00000323833 STX3Q13277 289 aa14.37□□□□□ -0.11
TSFM-201ENST00000323833 INPP5JQ15735 1006 aaPredicted RBP14.37□□□□□ -0.11
TSFM-201ENST00000323833 SPRED3Q2MJR0 410 aa14.37□□□□□ -0.11
TSFM-201ENST00000323833 GALNTL6Q49A17 601 aa14.37□□□□□ -0.11
TSFM-201ENST00000323833 TTMPQ5BVD1 217 aa14.37□□□□□ -0.11
TSFM-201ENST00000323833 HSDL2Q6YN16 418 aa14.37□□□□□ -0.11
TSFM-201ENST00000323833 LGI4Q8N135 537 aa14.37□□□□□ -0.11
TSFM-201ENST00000323833 CISD2Q8N5K1 135 aaKnown RBP14.37□□□□□ -0.11
TSFM-201ENST00000323833 CPT1CQ8TCG5 803 aa14.37□□□□□ -0.11
TSFM-201ENST00000323833 EXOSC8Q96B26 276 aaKnown RBP14.37□□□□□ -0.11
TSFM-201ENST00000323833 C19orf60Q96EN9 201 aa14.37□□□□□ -0.11
TSFM-201ENST00000323833 C3orf30Q96M34 536 aa14.37□□□□□ -0.11
TSFM-201ENST00000323833 SIGLEC12Q96PQ1 595 aa14.37□□□□□ -0.11
TSFM-201ENST00000323833 SORT1Q99523 831 aa14.37□□□□□ -0.11
TSFM-201ENST00000323833 UTP23Q9BRU9 249 aaKnown RBP14.37□□□□□ -0.11
TSFM-201ENST00000323833 NKIRAS1Q9NYS0 192 aa14.37□□□□□ -0.11
TSFM-201ENST00000323833 COPS7AQ9UBW8 275 aa14.37□□□□□ -0.11
TSFM-201ENST00000323833 UTS2RQ9UKP6 389 aa14.37□□□□□ -0.11
TSFM-201ENST00000323833 ERVK-19Q9WJR5 959 aa14.37□□□□□ -0.11
TSFM-201ENST00000323833 SVILO95425 2214 aa14.36□□□□□ -0.11
TSFM-201ENST00000323833 ATP6AP2A0A1C7CYW4 349 aa14.36□□□□□ -0.11
TSFM-201ENST00000323833 FCHO1O14526 889 aa14.36□□□□□ -0.11
TSFM-201ENST00000323833 DYRK3O43781 588 aa14.36□□□□□ -0.11
TSFM-201ENST00000323833 ATP6AP2O75787 350 aa14.36□□□□□ -0.11
TSFM-201ENST00000323833 IGKV3-11P04433 115 aa14.36□□□□□ -0.11
TSFM-201ENST00000323833 NT5EP21589 574 aa14.36□□□□□ -0.11
TSFM-201ENST00000323833 GRK2P25098 689 aa14.36□□□□□ -0.11
TSFM-201ENST00000323833 TACR1P25103 407 aa14.36□□□□□ -0.11
TSFM-201ENST00000323833 GALNSP34059 522 aa14.36□□□□□ -0.11
TSFM-201ENST00000323833 RPL38P63173 70 aaKnown RBP14.36□□□□□ -0.11
TSFM-201ENST00000323833 RNF4P78317 190 aa14.36□□□□□ -0.11
TSFM-201ENST00000323833 OC90Q02509 493 aaPredicted RBP14.36□□□□□ -0.11
TSFM-201ENST00000323833 BST1Q10588 318 aa14.36□□□□□ -0.11
TSFM-201ENST00000323833 HEPACAMQ14CZ8 416 aa14.36□□□□□ -0.11
TSFM-201ENST00000323833 IGFBP7Q16270 282 aa14.36□□□□□ -0.11
TSFM-201ENST00000323833 PRSS53Q2L4Q9 553 aa14.36□□□□□ -0.11
TSFM-201ENST00000323833 RFTN2Q52LD8 501 aaPredicted RBP14.36□□□□□ -0.11
TSFM-201ENST00000323833 SPINK14Q6IE38 97 aa14.36□□□□□ -0.11
TSFM-201ENST00000323833 ARMC10Q8N2F6 343 aa14.36□□□□□ -0.11
TSFM-201ENST00000323833 FAM76AQ8TAV0 307 aa14.36□□□□□ -0.11
TSFM-201ENST00000323833 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.36□□□□□ -0.113e-6■■■■■ 51.5
TSFM-201ENST00000323833 CNRIP1Q96F85 164 aaPredicted RBP14.36□□□□□ -0.11
TSFM-201ENST00000323833 FBXL20Q96IG2 436 aa14.36□□□□□ -0.11
TSFM-201ENST00000323833 METTL2AQ96IZ6 378 aaKnown RBP14.36□□□□□ -0.11
TSFM-201ENST00000323833 EGLN2Q96KS0 407 aa14.36□□□□□ -0.11
TSFM-201ENST00000323833 ART5Q96L15 291 aa14.36□□□□□ -0.11
TSFM-201ENST00000323833 ATP6V1G3Q96LB4 118 aa14.36□□□□□ -0.11
TSFM-201ENST00000323833 ZNF681Q96N22 645 aa14.36□□□□□ -0.11
TSFM-201ENST00000323833 CXorf21Q9HAI6 301 aa14.36□□□□□ -0.11
TSFM-201ENST00000323833 MAP10Q9P2G4 905 aa14.36□□□□□ -0.11
TSFM-201ENST00000323833 PSME2Q9UL46 239 aa14.36□□□□□ -0.11
TSFM-201ENST00000323833 NTNG1Q9Y2I2 539 aa14.36□□□□□ -0.11
TSFM-201ENST00000323833 PRRC2CQ9Y520 2896 aaKnown RBP14.36□□□□□ -0.11
TSFM-201ENST00000323833 NBASA2RRP1 2371 aa14.36□□□□□ -0.11
TSFM-201ENST00000323833 ZGRF1Q86YA3 2104 aa14.35□□□□□ -0.11
TSFM-201ENST00000323833 TRAV17A0A0B4J275 112 aa14.35□□□□□ -0.11
TSFM-201ENST00000323833 J3QKU1 62 aa14.35□□□□□ -0.11
TSFM-201ENST00000323833 WWP2O00308 870 aa14.35□□□□□ -0.11
TSFM-201ENST00000323833 PEX11AO75192 247 aa14.35□□□□□ -0.11
TSFM-201ENST00000323833 ITGA10O75578 1167 aa14.35□□□□□ -0.11
TSFM-201ENST00000323833 OR2J2O76002 312 aa14.35□□□□□ -0.11
TSFM-201ENST00000323833 CLPSP04118 112 aa14.35□□□□□ -0.11
TSFM-201ENST00000323833 JUNP05412 331 aaKnown RBP14.35□□□□□ -0.11
TSFM-201ENST00000323833 CSNK2A2P19784 350 aaPredicted RBP14.35□□□□□ -0.11
TSFM-201ENST00000323833 SSTR4P31391 388 aa14.35□□□□□ -0.11
TSFM-201ENST00000323833 GSTM5P46439 218 aa14.35□□□□□ -0.11
TSFM-201ENST00000323833 HK2P52789 917 aa14.35□□□□□ -0.11
TSFM-201ENST00000323833 OR1C1Q15619 314 aa14.35□□□□□ -0.11
TSFM-201ENST00000323833 XKR7Q5GH72 579 aa14.35□□□□□ -0.11
TSFM-201ENST00000323833 FAM71E1Q6IPT2 247 aa14.35□□□□□ -0.11
TSFM-201ENST00000323833 FAM111BQ6SJ93 734 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms