RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 CD244Q9BZW8 370 aa13.1□□□□□ -0.31
RPP40-201ENST00000319533 CDC42EP4Q9H3Q1 356 aaKnown RBP13.1□□□□□ -0.31
RPP40-201ENST00000319533 ACSS3Q9H6R3 686 aa13.1□□□□□ -0.31
RPP40-201ENST00000319533 LDAHQ9H6V9 325 aa13.1□□□□□ -0.31
RPP40-201ENST00000319533 NMRAL1Q9HBL8 299 aa13.1□□□□□ -0.31
RPP40-201ENST00000319533 ZFP64Q9NPA5 681 aa13.1□□□□□ -0.31
RPP40-201ENST00000319533 CNIH4Q9P003 139 aa13.1□□□□□ -0.31
RPP40-201ENST00000319533 IKBKGQ9Y6K9 419 aa13.1□□□□□ -0.31
RPP40-201ENST00000319533 ABCA4P78363 2273 aa13.1□□□□□ -0.31
RPP40-201ENST00000319533 ARHGAP21Q5T5U3 1957 aa13.09□□□□□ -0.31
RPP40-201ENST00000319533 LRRC3CA6NJW4 275 aa13.09□□□□□ -0.31
RPP40-201ENST00000319533 RTCAO00442 366 aaKnown RBP13.09□□□□□ -0.31
RPP40-201ENST00000319533 ACSL3O95573 720 aa13.09□□□□□ -0.31
RPP40-201ENST00000319533 NUDT7P0C024 238 aa13.09□□□□□ -0.31
RPP40-201ENST00000319533 SLC35E2BP0CK96 405 aa13.09□□□□□ -0.31
RPP40-201ENST00000319533 CPN2P22792 545 aa13.09□□□□□ -0.31
RPP40-201ENST00000319533 AP5B1Q2VPB7 878 aa13.09□□□□□ -0.31
RPP40-201ENST00000319533 FBXL19-AS1Q494R0 122 aa13.09□□□□□ -0.31
RPP40-201ENST00000319533 DEPDC1Q5TB30 811 aa13.09□□□□□ -0.31
RPP40-201ENST00000319533 MROH9Q5TGP6 573 aa13.09□□□□□ -0.31
RPP40-201ENST00000319533 KHDRBS2Q5VWX1 349 aaKnown RBP13.09□□□□□ -0.31
RPP40-201ENST00000319533 DGAT2L6Q6ZPD8 337 aa13.09□□□□□ -0.31
RPP40-201ENST00000319533 CHSY3Q70JA7 882 aa13.09□□□□□ -0.31
RPP40-201ENST00000319533 TAOK1Q7L7X3 1001 aa13.09□□□□□ -0.31
RPP40-201ENST00000319533 IFT20Q8IY31 132 aa13.09□□□□□ -0.31
RPP40-201ENST00000319533 ULK2Q8IYT8 1036 aa13.09□□□□□ -0.31
RPP40-201ENST00000319533 CHDHQ8NE62 594 aaPredicted RBP13.09□□□□□ -0.31
RPP40-201ENST00000319533 OR7G3Q8NG95 312 aa13.09□□□□□ -0.31
RPP40-201ENST00000319533 STAG3L4Q8TBR4 150 aa13.09□□□□□ -0.31
RPP40-201ENST00000319533 TANKQ92844 425 aa13.09□□□□□ -0.31
RPP40-201ENST00000319533 SPACA9Q96E40 222 aaPredicted RBP13.09□□□□□ -0.31
RPP40-201ENST00000319533 CMTM7Q96FZ5 175 aa13.09□□□□□ -0.31
RPP40-201ENST00000319533 ART5Q96L15 291 aa13.09□□□□□ -0.31
RPP40-201ENST00000319533 DGAT2Q96PD7 388 aa13.09□□□□□ -0.31
RPP40-201ENST00000319533 RASSF1Q9NS23 344 aa13.09□□□□□ -0.31
RPP40-201ENST00000319533 CCM2LQ9NUG4 571 aaPredicted RBP13.09□□□□□ -0.31
RPP40-201ENST00000319533 MS4A12Q9NXJ0 267 aa13.09□□□□□ -0.31
RPP40-201ENST00000319533 CD274Q9NZQ7 290 aa13.09□□□□□ -0.31
RPP40-201ENST00000319533 ST6GALNAC2Q9UJ37 374 aa13.09□□□□□ -0.31
RPP40-201ENST00000319533 RNF112Q9ULX5 631 aa13.09□□□□□ -0.31
RPP40-201ENST00000319533 BOKQ9UMX3 212 aaPredicted RBP13.09□□□□□ -0.31
RPP40-201ENST00000319533 TSC22D4Q9Y3Q8 395 aa13.09□□□□□ -0.31
RPP40-201ENST00000319533 CHCHD2Q9Y6H1 151 aaPredicted RBP13.09□□□□□ -0.31
RPP40-201ENST00000319533 NAV3Q8IVL0 2385 aa13.09□□□□□ -0.31
RPP40-201ENST00000319533 A0A087X1B8 175 aa13.08□□□□□ -0.32
RPP40-201ENST00000319533 HSPB2A8KAH6 182 aa13.08□□□□□ -0.32
RPP40-201ENST00000319533 HRKO00198 91 aa13.08□□□□□ -0.32
RPP40-201ENST00000319533 CCNT2O60583 730 aaKnown RBP13.08□□□□□ -0.32
RPP40-201ENST00000319533 TGFB1P01137 390 aa13.08□□□□□ -0.32
RPP40-201ENST00000319533 INHBAP08476 426 aa13.08□□□□□ -0.32
RPP40-201ENST00000319533 LTA4HP09960 611 aaKnown RBP13.08□□□□□ -0.32
RPP40-201ENST00000319533 FBXO45P0C2W1 286 aa13.08□□□□□ -0.32
RPP40-201ENST00000319533 ECHS1P30084 290 aa13.08□□□□□ -0.32
RPP40-201ENST00000319533 SSR2P43308 183 aa13.08□□□□□ -0.32
RPP40-201ENST00000319533 KIR2DL3P43628 341 aa13.08□□□□□ -0.32
RPP40-201ENST00000319533 SERPINB8P50452 374 aa13.08□□□□□ -0.32
RPP40-201ENST00000319533 ARFIP1P53367 373 aa13.08□□□□□ -0.32
RPP40-201ENST00000319533 HSPB2Q16082 182 aa13.08□□□□□ -0.32
RPP40-201ENST00000319533 SPRED3Q2MJR0 410 aa13.08□□□□□ -0.32
RPP40-201ENST00000319533 OR4C11Q6IEV9 310 aa13.08□□□□□ -0.32
RPP40-201ENST00000319533 MED27Q6P2C8 311 aa13.08□□□□□ -0.32
RPP40-201ENST00000319533 POMZP3Q6PJE2 187 aa13.08□□□□□ -0.32
RPP40-201ENST00000319533 OR4N5Q8IXE1 308 aa13.08□□□□□ -0.32
RPP40-201ENST00000319533 ZZZ3Q8IYH5 903 aa13.08□□□□□ -0.32
RPP40-201ENST00000319533 ZCCHC7Q8N3Z6 543 aaKnown RBP13.08□□□□□ -0.32
RPP40-201ENST00000319533 NEIL3Q8TAT5 605 aa13.08□□□□□ -0.32
RPP40-201ENST00000319533 UBTD2Q8WUN7 234 aa13.08□□□□□ -0.32
RPP40-201ENST00000319533 EXT2Q93063 718 aa13.08□□□□□ -0.32
RPP40-201ENST00000319533 RBM18Q96H35 190 aaKnown RBP13.08□□□□□ -0.32
RPP40-201ENST00000319533 POLDIP3Q9BY77 421 aaKnown RBP13.08□□□□□ -0.32
RPP40-201ENST00000319533 RPF2Q9H7B2 306 aaKnown RBP13.08□□□□□ -0.32
RPP40-201ENST00000319533 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.08□□□□□ -0.32
RPP40-201ENST00000319533 ADGRE2Q9UHX3 823 aa13.08□□□□□ -0.32
RPP40-201ENST00000319533 CNOT11Q9UKZ1 510 aaKnown RBP13.08□□□□□ -0.32
RPP40-201ENST00000319533 ACOT9Q9Y305 439 aa13.08□□□□□ -0.32
RPP40-201ENST00000319533 HRNRQ86YZ3 2850 aaPredicted RBP13.08□□□□□ -0.32
RPP40-201ENST00000319533 VPS13CQ709C8 3753 aa13.08□□□□□ -0.32
RPP40-201ENST00000319533 NCKAP5O14513 1909 aa13.07□□□□□ -0.32
RPP40-201ENST00000319533 ANKRD33BA6NCL7 494 aa13.07□□□□□ -0.32
RPP40-201ENST00000319533 AHRRA9YTQ3 701 aa13.07□□□□□ -0.32
RPP40-201ENST00000319533 DYRK3O43781 588 aa13.07□□□□□ -0.32
RPP40-201ENST00000319533 DIAPH2O60879 1101 aa13.07□□□□□ -0.32
RPP40-201ENST00000319533 KERAO60938 352 aa13.07□□□□□ -0.32
RPP40-201ENST00000319533 EPPINO95925 133 aa13.07□□□□□ -0.32
RPP40-201ENST00000319533 HOXB4P17483 251 aaPredicted RBP13.07□□□□□ -0.32
RPP40-201ENST00000319533 SERPINB3P29508 390 aa13.07□□□□□ -0.32
RPP40-201ENST00000319533 CEACAM8P31997 349 aaPredicted RBP13.07□□□□□ -0.32
RPP40-201ENST00000319533 GALNSP34059 522 aa13.07□□□□□ -0.32
RPP40-201ENST00000319533 KCNJ2P63252 427 aa13.07□□□□□ -0.32
RPP40-201ENST00000319533 PLIN5Q00G26 463 aa13.07□□□□□ -0.32
RPP40-201ENST00000319533 TNFRSF17Q02223 184 aa13.07□□□□□ -0.32
RPP40-201ENST00000319533 SLAMF1Q13291 335 aa13.07□□□□□ -0.32
RPP40-201ENST00000319533 NTRK2Q16620 822 aa13.07□□□□□ -0.32
RPP40-201ENST00000319533 FAM83EQ2M2I3 478 aa13.07□□□□□ -0.32
RPP40-201ENST00000319533 KLC3Q6P597 504 aa13.07□□□□□ -0.32
RPP40-201ENST00000319533 WDR53Q7Z5U6 358 aaPredicted RBP13.07□□□□□ -0.32
RPP40-201ENST00000319533 ISCA2Q86U28 154 aa13.07□□□□□ -0.32
RPP40-201ENST00000319533 GPR180Q86V85 440 aa13.07□□□□□ -0.32
RPP40-201ENST00000319533 ST13P4Q8IZP2 240 aaPredicted RBP13.07□□□□□ -0.32
RPP40-201ENST00000319533 RELL2Q8NC24 303 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms