RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 LSM2Q9Y333 95 aaKnown RBP15.23■□□□□ 0.03
CRAT-201ENST00000318080 SNX11Q9Y5W9 270 aa15.23■□□□□ 0.03
CRAT-201ENST00000318080 FABP7O15540 132 aa15.23■□□□□ 0.03
CRAT-201ENST00000318080 SGTAO43765 313 aa15.23■□□□□ 0.03
CRAT-201ENST00000318080 PDGFAP04085 211 aa15.23■□□□□ 0.03
CRAT-201ENST00000318080 ATP1B2P14415 290 aaPredicted RBP15.23■□□□□ 0.03
CRAT-201ENST00000318080 CSNK1DP48730 415 aa15.23■□□□□ 0.03
CRAT-201ENST00000318080 LIM2P55344 173 aa15.23■□□□□ 0.03
CRAT-201ENST00000318080 LMAN2Q12907 356 aa15.23■□□□□ 0.03
CRAT-201ENST00000318080 TSTA3Q13630 321 aaPredicted RBP15.23■□□□□ 0.03
CRAT-201ENST00000318080 PUM1Q14671 1186 aaKnown RBP eCLIP15.23■□□□□ 0.03
CRAT-201ENST00000318080 SEC23BQ15437 767 aa15.23■□□□□ 0.03
CRAT-201ENST00000318080 SPHARQ15513 63 aa15.23■□□□□ 0.03
CRAT-201ENST00000318080 TEAD4Q15561 434 aa15.23■□□□□ 0.03
CRAT-201ENST00000318080 TAF12Q16514 161 aa15.23■□□□□ 0.03
CRAT-201ENST00000318080 GCNT6Q5T4J0 391 aa15.23■□□□□ 0.03
CRAT-201ENST00000318080 LIPJQ5W064 366 aa15.23■□□□□ 0.03
CRAT-201ENST00000318080 RETSATQ6NUM9 610 aa15.23■□□□□ 0.03
CRAT-201ENST00000318080 TPRG1Q6ZUI0 275 aa15.23■□□□□ 0.03
CRAT-201ENST00000318080 MEX3DQ86XN8 651 aaKnown RBP15.23■□□□□ 0.03
CRAT-201ENST00000318080 VPS37AQ8NEZ2 397 aa15.23■□□□□ 0.03
CRAT-201ENST00000318080 CHTF18Q8WVB6 975 aa15.23■□□□□ 0.03
CRAT-201ENST00000318080 SCRN2Q96FV2 425 aa15.23■□□□□ 0.03
CRAT-201ENST00000318080 BRD9Q9H8M2 597 aa15.23■□□□□ 0.03
CRAT-201ENST00000318080 PLXNB3Q9ULL4 1909 aa15.23■□□□□ 0.03
CRAT-201ENST00000318080 IGLV3-16A0A075B6K0 115 aa15.22■□□□□ 0.03
CRAT-201ENST00000318080 TRBC2A0A5B9 178 aa15.22■□□□□ 0.03
CRAT-201ENST00000318080 KPNA5O15131 536 aa15.22■□□□□ 0.03
CRAT-201ENST00000318080 SCG5P05408 212 aa15.22■□□□□ 0.03
CRAT-201ENST00000318080 PSMA1P25786 263 aaKnown RBP15.22■□□□□ 0.03
CRAT-201ENST00000318080 CSTF2P33240 577 aaKnown RBP eCLIP15.22■□□□□ 0.03
CRAT-201ENST00000318080 MAP2K3P46734 347 aa15.22■□□□□ 0.03
CRAT-201ENST00000318080 SLC9A3P48764 834 aa15.22■□□□□ 0.03
CRAT-201ENST00000318080 CDK6Q00534 326 aa15.22■□□□□ 0.03
CRAT-201ENST00000318080 EEF1A2Q05639 463 aaKnown RBP15.22■□□□□ 0.03
CRAT-201ENST00000318080 TIMM50Q3ZCQ8 353 aa15.22■□□□□ 0.03
CRAT-201ENST00000318080 AGTRAPQ6RW13 159 aa15.22■□□□□ 0.03
CRAT-201ENST00000318080 TCTE3Q8IZS6 198 aa15.22■□□□□ 0.03
CRAT-201ENST00000318080 WDR48Q8TAF3 677 aa15.22■□□□□ 0.03
CRAT-201ENST00000318080 CREB3L4Q8TEY5 395 aa15.22■□□□□ 0.03
CRAT-201ENST00000318080 MAGEB10Q96LZ2 347 aaPredicted RBP15.22■□□□□ 0.03
CRAT-201ENST00000318080 QRFPRQ96P65 431 aa15.22■□□□□ 0.03
CRAT-201ENST00000318080 TMEM175Q9BSA9 504 aa15.22■□□□□ 0.03
CRAT-201ENST00000318080 WACQ9BTA9 647 aa15.22■□□□□ 0.03
CRAT-201ENST00000318080 C1QTNF7Q9BXJ2 289 aa15.22■□□□□ 0.03
CRAT-201ENST00000318080 CLN6Q9NWW5 311 aa15.22■□□□□ 0.03
CRAT-201ENST00000318080 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.22■□□□□ 0.03
CRAT-201ENST00000318080 FAM240BA0A1B0GVZ2 78 aa15.22■□□□□ 0.03
CRAT-201ENST00000318080 SERTM1A2A2V5 107 aa15.22■□□□□ 0.03
CRAT-201ENST00000318080 HPGDSO60760 199 aa15.22■□□□□ 0.03
CRAT-201ENST00000318080 SLC16A8O95907 504 aa15.22■□□□□ 0.03
CRAT-201ENST00000318080 EFEMP2O95967 443 aa15.22■□□□□ 0.03
CRAT-201ENST00000318080 C1QBP02746 253 aa15.22■□□□□ 0.03
CRAT-201ENST00000318080 TP53P04637 393 aaPredicted RBP15.22■□□□□ 0.03
CRAT-201ENST00000318080 LINC00271P0C7V0 271 aa15.22■□□□□ 0.03
CRAT-201ENST00000318080 AGFG1P52594 562 aaKnown RBP15.22■□□□□ 0.03
CRAT-201ENST00000318080 MEF2AQ02078 507 aaPredicted RBP15.22■□□□□ 0.03
CRAT-201ENST00000318080 DBPQ10586 325 aaPredicted RBP15.22■□□□□ 0.03
CRAT-201ENST00000318080 C9orf50Q5SZB4 431 aa15.22■□□□□ 0.03
CRAT-201ENST00000318080 COL13A1Q5TAT6 717 aaPredicted RBP15.22■□□□□ 0.03
CRAT-201ENST00000318080 OR2G6Q5TZ20 316 aa15.22■□□□□ 0.03
CRAT-201ENST00000318080 ZNF783Q6ZMS7 281 aa15.22■□□□□ 0.03
CRAT-201ENST00000318080 SHFQ7M4L6 423 aa15.22■□□□□ 0.03
CRAT-201ENST00000318080 RBM45Q8IUH3 476 aaKnown RBP15.22■□□□□ 0.03
CRAT-201ENST00000318080 SLC39A11Q8N1S5 342 aa15.22■□□□□ 0.03
CRAT-201ENST00000318080 SLC37A3Q8NCC5 494 aa15.22■□□□□ 0.03
CRAT-201ENST00000318080 ACAT2Q9BWD1 397 aa15.22■□□□□ 0.03
CRAT-201ENST00000318080 TXNL4BQ9NX01 149 aaKnown RBP15.22■□□□□ 0.03
CRAT-201ENST00000318080 KLHL18O94889 574 aa15.21■□□□□ 0.03
CRAT-201ENST00000318080 GSTM1P09488 218 aa15.21■□□□□ 0.03
CRAT-201ENST00000318080 TRAPPC2P0DI81 140 aa15.21■□□□□ 0.03
CRAT-201ENST00000318080 TRAPPC2BP0DI82 140 aa15.21■□□□□ 0.03
CRAT-201ENST00000318080 SLC2A2P11168 524 aaPredicted RBP15.21■□□□□ 0.03
CRAT-201ENST00000318080 SERPINA4P29622 427 aa15.21■□□□□ 0.03
CRAT-201ENST00000318080 TNK1Q13470 666 aa15.21■□□□□ 0.03
CRAT-201ENST00000318080 ZMYND11Q15326 602 aa15.21■□□□□ 0.03
CRAT-201ENST00000318080 ZNF770Q6IQ21 691 aaPredicted RBP15.21■□□□□ 0.03
CRAT-201ENST00000318080 KIAA1841Q6NSI8 718 aa15.21■□□□□ 0.03
CRAT-201ENST00000318080 Q8N402 240 aa15.21■□□□□ 0.03
CRAT-201ENST00000318080 NEIL2Q969S2 332 aa15.21■□□□□ 0.03
CRAT-201ENST00000318080 ZNF558Q96NG5 402 aa15.21■□□□□ 0.03
CRAT-201ENST00000318080 C17orf62Q9BQA9 187 aa15.21■□□□□ 0.03
CRAT-201ENST00000318080 OR51B5Q9H339 312 aa15.21■□□□□ 0.03
CRAT-201ENST00000318080 SLC25A19Q9HC21 320 aa15.21■□□□□ 0.03
CRAT-201ENST00000318080 ZNF224Q9NZL3 707 aa15.21■□□□□ 0.03
CRAT-201ENST00000318080 STOX2Q9P2F5 926 aaPredicted RBP15.21■□□□□ 0.03
CRAT-201ENST00000318080 B4GALT6Q9UBX8 382 aa15.21■□□□□ 0.03
CRAT-201ENST00000318080 HELZP42694 1942 aaKnown RBP15.21■□□□□ 0.03
CRAT-201ENST00000318080 ISM1B1AKI9 464 aa15.21■□□□□ 0.03
CRAT-201ENST00000318080 ZNF670-ZNF695F2Z2N8 137 aa15.21■□□□□ 0.03
CRAT-201ENST00000318080 AKAP8O43823 692 aaKnown RBP15.21■□□□□ 0.03
CRAT-201ENST00000318080 TGFB1P01137 390 aa15.21■□□□□ 0.03
CRAT-201ENST00000318080 ZNF30P17039 623 aa15.21■□□□□ 0.03
CRAT-201ENST00000318080 TNNI3P19429 210 aa15.21■□□□□ 0.03
CRAT-201ENST00000318080 M6PRP20645 277 aa15.21■□□□□ 0.03
CRAT-201ENST00000318080 CTBP2P56545 445 aa15.21■□□□□ 0.03
CRAT-201ENST00000318080 LSM11P83369 360 aaKnown RBP eCLIP15.21■□□□□ 0.03
CRAT-201ENST00000318080 ANXA8L1Q5VT79 327 aa15.21■□□□□ 0.03
CRAT-201ENST00000318080 KRT73Q86Y46 540 aa15.21■□□□□ 0.03
CRAT-201ENST00000318080 PLCZ1Q86YW0 608 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms