RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 NDUFAF5Q5TEU4 345 aa18.03■□□□□ 0.48
LIME1-201ENST00000309546 RGS9BPQ6ZS82 235 aa18.03■□□□□ 0.48
LIME1-201ENST00000309546 MILR1Q7Z6M3 343 aa18.03■□□□□ 0.48
LIME1-201ENST00000309546 TMEM251Q8N6I4 163 aa18.03■□□□□ 0.48
LIME1-201ENST00000309546 OR4F6Q8NGB9 312 aa18.03■□□□□ 0.48
LIME1-201ENST00000309546 MRPL57Q9BQC6 102 aaKnown RBP18.03■□□□□ 0.48
LIME1-201ENST00000309546 MRPL46Q9H2W6 279 aaKnown RBP18.03■□□□□ 0.48
LIME1-201ENST00000309546 TP63Q9H3D4 680 aaPredicted RBP18.03■□□□□ 0.48
LIME1-201ENST00000309546 ELOVL6Q9H5J4 265 aa18.03■□□□□ 0.48
LIME1-201ENST00000309546 ZDHHC11Q9H8X9 412 aa18.03■□□□□ 0.48
LIME1-201ENST00000309546 IL1RL2Q9HB29 575 aa18.03■□□□□ 0.48
LIME1-201ENST00000309546 TEX10Q9NXF1 929 aaPredicted RBP18.03■□□□□ 0.48
LIME1-201ENST00000309546 TUBA8Q9NY65 449 aaPredicted RBP18.03■□□□□ 0.48
LIME1-201ENST00000309546 PSD3Q9NYI0 1048 aa18.03■□□□□ 0.48
LIME1-201ENST00000309546 HRH3Q9Y5N1 445 aa18.03■□□□□ 0.48
LIME1-201ENST00000309546 ATP6AP2A0A1C7CYW4 349 aa18.02■□□□□ 0.48
LIME1-201ENST00000309546 A0A1W2PS29 197 aa18.02■□□□□ 0.48
LIME1-201ENST00000309546 ATP6AP2O75787 350 aa18.02■□□□□ 0.48
LIME1-201ENST00000309546 GLSO94925 669 aaPredicted RBP18.02■□□□□ 0.48
LIME1-201ENST00000309546 NADKO95544 446 aaPredicted RBP18.02■□□□□ 0.48
LIME1-201ENST00000309546 KLK1P06870 262 aa18.02■□□□□ 0.48
LIME1-201ENST00000309546 TSPAN8P19075 237 aa18.02■□□□□ 0.48
LIME1-201ENST00000309546 PIK3R1P27986 724 aa18.02■□□□□ 0.48
LIME1-201ENST00000309546 PIGAP37287 484 aa18.02■□□□□ 0.48
LIME1-201ENST00000309546 MAGEA5P43359 124 aa18.02■□□□□ 0.48
LIME1-201ENST00000309546 TEX35Q5T0J7 233 aa18.02■□□□□ 0.48
LIME1-201ENST00000309546 PRAMEF20Q5VT98 475 aa18.02■□□□□ 0.48
LIME1-201ENST00000309546 FAM109AQ8N4B1 249 aa18.02■□□□□ 0.48
LIME1-201ENST00000309546 MARVELD2Q8N4S9 558 aa18.02■□□□□ 0.48
LIME1-201ENST00000309546 FAM13CQ8NE31 585 aa18.02■□□□□ 0.48
LIME1-201ENST00000309546 SPACA9Q96E40 222 aaPredicted RBP18.02■□□□□ 0.48
LIME1-201ENST00000309546 SMC6Q96SB8 1091 aa18.02■□□□□ 0.48
LIME1-201ENST00000309546 MRPL1Q9BYD6 325 aaKnown RBP18.02■□□□□ 0.48
LIME1-201ENST00000309546 WWTR1Q9GZV5 400 aa18.02■□□□□ 0.48
LIME1-201ENST00000309546 NFU1Q9UMS0 254 aa18.02■□□□□ 0.48
LIME1-201ENST00000309546 MYO9AB2RTY4 2548 aa18.02■□□□□ 0.47
LIME1-201ENST00000309546 A8MT66 165 aa18.01■□□□□ 0.47
LIME1-201ENST00000309546 PGRMC2O15173 223 aa18.01■□□□□ 0.47
LIME1-201ENST00000309546 RPS17P08708 135 aaKnown RBP18.01■□□□□ 0.47
LIME1-201ENST00000309546 SNRPAP09012 282 aaKnown RBP18.01■□□□□ 0.47
LIME1-201ENST00000309546 SSTR4P31391 388 aa18.01■□□□□ 0.47
LIME1-201ENST00000309546 CDH13P55290 713 aa18.01■□□□□ 0.47
LIME1-201ENST00000309546 SLC37A1P57057 533 aa18.01■□□□□ 0.47
LIME1-201ENST00000309546 ZNF791Q3KP31 576 aaPredicted RBP18.01■□□□□ 0.47
LIME1-201ENST00000309546 CCNYL2Q5T2Q4 361 aa18.01■□□□□ 0.47
LIME1-201ENST00000309546 SLC22A10Q63ZE4 541 aa18.01■□□□□ 0.47
LIME1-201ENST00000309546 TMEM211Q6ICI0 200 aa18.01■□□□□ 0.47
LIME1-201ENST00000309546 RPRMLQ8N4K4 120 aa18.01■□□□□ 0.47
LIME1-201ENST00000309546 OR5M9Q8NGP3 310 aa18.01■□□□□ 0.47
LIME1-201ENST00000309546 OR5M3Q8NGP4 307 aa18.01■□□□□ 0.47
LIME1-201ENST00000309546 LDAHQ9H6V9 325 aa18.01■□□□□ 0.47
LIME1-201ENST00000309546 EXO5Q9H790 373 aa18.01■□□□□ 0.47
LIME1-201ENST00000309546 AHSPQ9NZD4 102 aa18.01■□□□□ 0.47
LIME1-201ENST00000309546 TNFRSF10DQ9UBN6 386 aa18.01■□□□□ 0.47
LIME1-201ENST00000309546 SLC12A4Q9UP95 1085 aa18.01■□□□□ 0.47
LIME1-201ENST00000309546 PHF3Q92576 2039 aaKnown RBP18.01■□□□□ 0.47
LIME1-201ENST00000309546 NCKAP5O14513 1909 aa18■□□□□ 0.47
LIME1-201ENST00000309546 A0A1B0GTL3 188 aa18■□□□□ 0.47
LIME1-201ENST00000309546 LRATO95237 230 aa18■□□□□ 0.47
LIME1-201ENST00000309546 OTCP00480 354 aa18■□□□□ 0.47
LIME1-201ENST00000309546 CELA3AP09093 270 aa18■□□□□ 0.47
LIME1-201ENST00000309546 SLC35E2P0CK97 266 aa18■□□□□ 0.47
LIME1-201ENST00000309546 KIR3DL1P43629 444 aa18■□□□□ 0.47
LIME1-201ENST00000309546 KCNJ2P63252 427 aa18■□□□□ 0.47
LIME1-201ENST00000309546 FOXO1Q12778 655 aa18■□□□□ 0.47
LIME1-201ENST00000309546 EBPQ15125 230 aaKnown RBP18■□□□□ 0.47
LIME1-201ENST00000309546 GGTA1PQ4G0N0 100 aa18■□□□□ 0.47
LIME1-201ENST00000309546 LGSNQ5TDP6 509 aa18■□□□□ 0.47
LIME1-201ENST00000309546 C6orf163Q5TEZ5 329 aa18■□□□□ 0.47
LIME1-201ENST00000309546 FAM219BQ5XKK7 198 aa18■□□□□ 0.47
LIME1-201ENST00000309546 LYPD8Q6UX82 237 aa18■□□□□ 0.47
LIME1-201ENST00000309546 PAGE2Q7Z2X7 111 aa18■□□□□ 0.47
LIME1-201ENST00000309546 GALNT12Q8IXK2 581 aa18■□□□□ 0.47
LIME1-201ENST00000309546 SLC15A4Q8N697 577 aa18■□□□□ 0.47
LIME1-201ENST00000309546 ZNF483Q8TF39 744 aaPredicted RBP18■□□□□ 0.47
LIME1-201ENST00000309546 SELENOMQ8WWX9 145 aa18■□□□□ 0.47
LIME1-201ENST00000309546 TRIM8Q9BZR9 551 aa18■□□□□ 0.47
LIME1-201ENST00000309546 FARSBQ9NSD9 589 aaKnown RBP18■□□□□ 0.47
LIME1-201ENST00000309546 PNPLA3Q9NST1 481 aa18■□□□□ 0.47
LIME1-201ENST00000309546 SEC23IPQ9Y6Y8 1000 aaKnown RBP18■□□□□ 0.47
LIME1-201ENST00000309546 OR6C76A6NM76 312 aa17.99■□□□□ 0.47
LIME1-201ENST00000309546 FAM90A27PA6NNH2 459 aa17.99■□□□□ 0.47
LIME1-201ENST00000309546 PPP6CO00743 305 aa17.99■□□□□ 0.47
LIME1-201ENST00000309546 PDYNP01213 254 aa17.99■□□□□ 0.47
LIME1-201ENST00000309546 CLPSP04118 112 aa17.99■□□□□ 0.47
LIME1-201ENST00000309546 SBK3P0C264 359 aa17.99■□□□□ 0.47
LIME1-201ENST00000309546 NT5EP21589 574 aa17.99■□□□□ 0.47
LIME1-201ENST00000309546 SERPINB3P29508 390 aa17.99■□□□□ 0.47
LIME1-201ENST00000309546 MAPK12P53778 367 aa17.99■□□□□ 0.47
LIME1-201ENST00000309546 EMC4Q5J8M3 183 aa17.99■□□□□ 0.47
LIME1-201ENST00000309546 C10orf62Q5T681 223 aaPredicted RBP17.99■□□□□ 0.47
LIME1-201ENST00000309546 HLA-DQA1Q5Y7H0 255 aa17.99■□□□□ 0.47
LIME1-201ENST00000309546 LETMD1Q6P1Q0 360 aa17.99■□□□□ 0.47
LIME1-201ENST00000309546 ZNF585AQ6P3V2 769 aa17.99■□□□□ 0.47
LIME1-201ENST00000309546 TRILQ7L0X0 811 aa17.99■□□□□ 0.47
LIME1-201ENST00000309546 COMMD6Q7Z4G1 85 aa17.99■□□□□ 0.47
LIME1-201ENST00000309546 OR10G3Q8NGC4 313 aa17.99■□□□□ 0.47
LIME1-201ENST00000309546 OR4K14Q8NGD5 310 aa17.99■□□□□ 0.47
LIME1-201ENST00000309546 TRPC4APQ8TEL6 797 aa17.99■□□□□ 0.47
LIME1-201ENST00000309546 PAQR8Q8TEZ7 354 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms