RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 NINJ1Q92982 152 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 STACQ99469 402 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 ZPBPQ9BS86 351 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 FAM212BQ9NTI7 297 aaPredicted RBP3.85□□□□□ -1.79
USH2A-201ENST00000307340 SERTM1A2A2V5 107 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 M0QZQ0 153 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 PAK4O96013 591 aaPredicted RBP3.85□□□□□ -1.79
USH2A-201ENST00000307340 CXCR1P25024 350 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 THBS3P49746 956 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 ZNF678Q5SXM1 525 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 ZNF776Q68DI1 518 aaPredicted RBP3.85□□□□□ -1.79
USH2A-201ENST00000307340 SERPINA12Q8IW75 414 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 CPEB3Q8NE35 698 aaKnown RBP3.85□□□□□ -1.79
USH2A-201ENST00000307340 ZMIZ2Q8NF64 920 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 ACAT2Q9BWD1 397 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 PDE7BQ9NP56 450 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 RHBDL2Q9NX52 303 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 RNF6Q9Y252 685 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 CORINQ9Y5Q5 1042 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 PRKCAP17252 672 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 ANXA7P20073 488 aaKnown RBP3.85□□□□□ -1.79
USH2A-201ENST00000307340 WEE1P30291 646 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 ETV4P43268 484 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 TPGS1Q6ZTW0 290 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 ZSCAN4Q8NAM6 433 aaPredicted RBP3.85□□□□□ -1.79
USH2A-201ENST00000307340 OR4K14Q8NGD5 310 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 ZSCAN18Q8TBC5 510 aaPredicted RBP3.85□□□□□ -1.79
USH2A-201ENST00000307340 ELP3Q9H9T3 547 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 EME2A4GXA9 379 aaPredicted RBP3.85□□□□□ -1.79
USH2A-201ENST00000307340 AGAP14A8MT82 685 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 ARVCFO00192 962 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 KCNK2O95069 426 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 TPH1P17752 444 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 ARRB1P49407 418 aaPredicted RBP3.85□□□□□ -1.79
USH2A-201ENST00000307340 SEC61A1P61619 476 aaKnown RBP3.85□□□□□ -1.79
USH2A-201ENST00000307340 PLP2Q04941 152 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 MAD2L1BPQ15013 274 aaPredicted RBP3.85□□□□□ -1.79
USH2A-201ENST00000307340 POU4F3Q15319 338 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 RBMS2Q15434 407 aaKnown RBP3.85□□□□□ -1.79
USH2A-201ENST00000307340 LRRC66Q68CR7 880 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 CCDC24Q8N4L8 307 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 PCDH19Q8TAB3 1148 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 ARL11Q969Q4 196 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 MUTYHQ9UIF7 546 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 FABP1P07148 127 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 FSHRP23945 695 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 SSTP61278 116 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 LAPTM4AQ15012 233 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 TARBP2Q15633 366 aaKnown RBP3.85□□□□□ -1.79
USH2A-201ENST00000307340 RTL8BQ17RB0 113 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 NCEH1Q6PIU2 408 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 SLC25A41Q8N5S1 370 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 DNAAF1Q8NEP3 725 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 DDIT4LQ96D03 193 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 MAELQ96JY0 434 aaKnown RBP3.85□□□□□ -1.79
USH2A-201ENST00000307340 KREMEN1Q96MU8 473 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 PSD2Q9BQI7 771 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 CCDC86Q9H6F5 360 aaKnown RBP3.85□□□□□ -1.79
USH2A-201ENST00000307340 SPACA1Q9HBV2 294 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 ACP6Q9NPH0 428 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 TMEM181Q9P2C4 612 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 FBXO10Q9UK96 956 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 POM121CA8CG34 1229 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 YDJCA8MPS7 323 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 TGM5O43548 720 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 CD6P30203 668 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 EIF2S3P41091 472 aaKnown RBP3.85□□□□□ -1.79
USH2A-201ENST00000307340 GLP1RP43220 463 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 GSK3AP49840 483 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 FPGSQ05932 587 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 RIN1Q13671 783 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 SLC18B1Q6NT16 456 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 POMZP3Q6PJE2 187 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 OR2T11Q8NH01 316 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 NUDT16L1Q9BRJ7 211 aaKnown RBP3.85□□□□□ -1.79
USH2A-201ENST00000307340 SRMSQ9H3Y6 488 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 SLC7A11Q9UPY5 501 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 PCDHGA8Q9Y5G5 932 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.85□□□□□ -1.79
USH2A-201ENST00000307340 TMEM88BA6NKF7 163 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 H0YIV9 168 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 PCDH7O60245 1069 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 THBS1P07996 1170 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 CCND3P30281 292 aaPredicted RBP3.85□□□□□ -1.79
USH2A-201ENST00000307340 FMO3P31513 532 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 PCLAFQ15004 111 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 LCTLQ6UWM7 567 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 COMMD2Q86X83 199 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 FAM185AQ8N0U4 392 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 TXNDC5Q8NBS9 432 aaKnown RBP3.85□□□□□ -1.79
USH2A-201ENST00000307340 OR10G2Q8NGC3 310 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 ORAI3Q9BRQ5 295 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 DPH7Q9BTV6 452 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 FBXO8Q9NRD0 319 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 RGS9O75916 674 aaPredicted RBP3.85□□□□□ -1.79
USH2A-201ENST00000307340 DRD1P21728 446 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 ETV1P50549 477 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 PRKXP51817 358 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 TPRG1LQ5T0D9 272 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 PDZD9Q8IXQ8 264 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms