RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 KCTD18Q6PI47 426 aaPredicted RBP12.87□□□□□ -0.35
TRIM56-201ENST00000306085 OR9K2Q8NGE7 335 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 SLC22A17Q8WUG5 538 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 TERTO14746 1132 aaKnown RBP12.87□□□□□ -0.35
TRIM56-201ENST00000306085 HK3P52790 923 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 SRYQ05066 204 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 RIPPLY1Q0D2K3 151 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 PCGF3Q3KNV8 242 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 LURAP1Q96LR2 239 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 LMF1Q96S06 567 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 GATA5Q9BWX5 397 aaPredicted RBP12.87□□□□□ -0.35
TRIM56-201ENST00000306085 RPF2Q9H7B2 306 aaKnown RBP12.87□□□□□ -0.35
TRIM56-201ENST00000306085 KLHL9Q9P2J3 617 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 TET3O43151 1660 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 SVILO95425 2214 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 CREG1O75629 220 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 TNFP01375 233 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 SNTB2Q13425 540 aaKnown RBP12.87□□□□□ -0.35
TRIM56-201ENST00000306085 TRAM2Q15035 370 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 SFRP4Q6FHJ7 346 aaPredicted RBP12.87□□□□□ -0.35
TRIM56-201ENST00000306085 OCSTAMPQ9BR26 566 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 MEPEQ9NQ76 525 aaPredicted RBP12.87□□□□□ -0.35
TRIM56-201ENST00000306085 DNAJC5BQ9UF47 199 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 TESQ9UGI8 421 aaKnown RBP12.87□□□□□ -0.35
TRIM56-201ENST00000306085 GTF2IRD1Q9UHL9 959 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 CLIC3O95833 236 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 ALPIP09923 528 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 DRD5P21918 477 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 DHPSP49366 369 aaPredicted RBP12.87□□□□□ -0.35
TRIM56-201ENST00000306085 FAM217AQ8IXS0 508 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 SEMA6CQ9H3T2 930 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 SYNPO2LQ9H987 977 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 A0A1W2PS29 197 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 DCDC2BA2VCK2 349 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 UNC119BA6NIH7 251 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 MOB1BQ7L9L4 216 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 SLC2A12Q8TD20 617 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 METTL2AQ96IZ6 378 aaKnown RBP12.87□□□□□ -0.35
TRIM56-201ENST00000306085 IL36AQ9UHA7 158 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 OR6C75A6NL08 312 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 SNCGO76070 127 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 PIGRP01833 764 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 HNRNPFP52597 415 aaKnown RBP12.87□□□□□ -0.35
TRIM56-201ENST00000306085 LRIT3Q3SXY7 679 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 SLC22A10Q63ZE4 541 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 OR51T1Q8NGJ9 327 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 OR8D2Q9GZM6 311 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 KCNIP2Q9NS61 270 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 POLLQ9UGP5 575 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 CEMIPQ8WUJ3 1361 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 C6orf47O95873 294 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 KCNC1P48547 511 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 GOLGA2P5Q9HBQ8 144 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 GAAP10253 952 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 CLCNKAP51800 687 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 CYCSP99999 105 aaKnown RBP12.87□□□□□ -0.35
TRIM56-201ENST00000306085 PEA15Q15121 130 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 RBMXL1Q96E39 390 aaKnown RBP12.87□□□□□ -0.35
TRIM56-201ENST00000306085 ELMOD3Q96FG2 381 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 ATP6V1G2-DDX39BF2Z307 99 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 KIAA0513O60268 411 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 RAB7AP51149 207 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 CAP1Q01518 475 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 CDCA5Q96FF9 252 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 CMTM7Q96FZ5 175 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 SLC17A6Q9P2U8 582 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.86□□□□□ -0.353e-6■■■□□ 18.5
TRIM56-201ENST00000306085 LILRB3O75022 631 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 RHOQP17081 205 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 ADRA1BP35368 520 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 PPP4CP60510 307 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 HTRA4P83105 476 aaPredicted RBP12.86□□□□□ -0.35
TRIM56-201ENST00000306085 PMPCAQ10713 525 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 TSTD2Q5T7W7 516 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 HEPHL1Q6MZM0 1159 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 IDO2Q6ZQW0 420 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 ZNF34Q8IZ26 560 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 ST6GALNAC5Q9BVH7 336 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 CDKN2BP42772 138 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 PSMG2Q969U7 264 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 ACBD6Q9BR61 282 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 SLC22A14Q9Y267 594 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 NUP205Q92621 2012 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.86□□□□□ -0.35
TRIM56-201ENST00000306085 TBX10O75333 385 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 FRG2Q64ET8 278 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 JOSD2Q8TAC2 188 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 HYLS1Q96M11 299 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 FRG2BQ96QU4 278 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 HRH4Q9H3N8 390 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 MED12Q93074 2177 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 OR4Q2P0C623 313 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 TPT1P13693 172 aaKnown RBP12.86□□□□□ -0.35
TRIM56-201ENST00000306085 BDKRB1P46663 353 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 ANKRD22Q5VYY1 191 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 REEP3Q6NUK4 255 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 SYT3Q9BQG1 590 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 FTCDNL1E5RQL4 147 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 NIPSNAP2O75323 286 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 OAZ1P54368 228 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms