RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 TLX1P31314 330 aaPredicted RBP20.99■□□□□ 0.95
SMAD1-201ENST00000302085 CLCN2P51788 898 aa20.99■□□□□ 0.95
SMAD1-201ENST00000302085 XKP51811 444 aa20.99■□□□□ 0.95
SMAD1-201ENST00000302085 LTB4RQ15722 352 aa20.99■□□□□ 0.95
SMAD1-201ENST00000302085 CYP27C1Q4G0S4 372 aa20.99■□□□□ 0.95
SMAD1-201ENST00000302085 CWF19L1Q69YN2 538 aaKnown RBP20.99■□□□□ 0.95
SMAD1-201ENST00000302085 USP51Q70EK9 711 aa20.99■□□□□ 0.95
SMAD1-201ENST00000302085 OR4N5Q8IXE1 308 aa20.99■□□□□ 0.95
SMAD1-201ENST00000302085 ARHGEF39Q8N4T4 335 aa20.99■□□□□ 0.95
SMAD1-201ENST00000302085 SMYD1Q8NB12 490 aa20.99■□□□□ 0.95
SMAD1-201ENST00000302085 OR4K14Q8NGD5 310 aa20.99■□□□□ 0.95
SMAD1-201ENST00000302085 OR5T3Q8NGG3 340 aa20.99■□□□□ 0.95
SMAD1-201ENST00000302085 OR5D16Q8NGK9 328 aa20.99■□□□□ 0.95
SMAD1-201ENST00000302085 LZICQ8WZA0 190 aa20.99■□□□□ 0.95
SMAD1-201ENST00000302085 MS4A12Q9NXJ0 267 aa20.99■□□□□ 0.95
SMAD1-201ENST00000302085 NDUFAF4Q9P032 175 aa20.99■□□□□ 0.95
SMAD1-201ENST00000302085 EMC8O43402 210 aa20.98■□□□□ 0.95
SMAD1-201ENST00000302085 DPM1O60762 260 aa20.98■□□□□ 0.95
SMAD1-201ENST00000302085 TNFAIP8O95379 198 aa20.98■□□□□ 0.95
SMAD1-201ENST00000302085 SMIM18P0DKX4 95 aa20.98■□□□□ 0.95
SMAD1-201ENST00000302085 OR1E2P47887 323 aa20.98■□□□□ 0.95
SMAD1-201ENST00000302085 ZXDAP98168 799 aa20.98■□□□□ 0.95
SMAD1-201ENST00000302085 LAPTM4AQ15012 233 aa20.98■□□□□ 0.95
SMAD1-201ENST00000302085 KRT80Q6KB66 452 aa20.98■□□□□ 0.95
SMAD1-201ENST00000302085 ST13P4Q8IZP2 240 aaPredicted RBP20.98■□□□□ 0.95
SMAD1-201ENST00000302085 XAGE5Q8WWM1 108 aa20.98■□□□□ 0.95
SMAD1-201ENST00000302085 MOAP1Q96BY2 351 aa20.98■□□□□ 0.95
SMAD1-201ENST00000302085 YIPF4Q9BSR8 244 aa20.98■□□□□ 0.95
SMAD1-201ENST00000302085 RSPO3Q9BXY4 272 aaPredicted RBP20.98■□□□□ 0.95
SMAD1-201ENST00000302085 THUMPD1Q9NXG2 353 aaKnown RBP20.98■□□□□ 0.95
SMAD1-201ENST00000302085 IFT80Q9P2H3 777 aaPredicted RBP20.98■□□□□ 0.95
SMAD1-201ENST00000302085 THEGQ9P2T0 379 aa20.98■□□□□ 0.95
SMAD1-201ENST00000302085 TRPC4Q9UBN4 977 aa20.98■□□□□ 0.95
SMAD1-201ENST00000302085 TMEM131Q92545 1883 aa20.98■□□□□ 0.95
SMAD1-201ENST00000302085 H0YAE9 185 aa20.97■□□□□ 0.95
SMAD1-201ENST00000302085 ALBP02768 609 aa20.97■□□□□ 0.95
SMAD1-201ENST00000302085 HMGN2P05204 90 aaKnown RBP20.97■□□□□ 0.95
SMAD1-201ENST00000302085 FHP07954 510 aa20.97■□□□□ 0.95
SMAD1-201ENST00000302085 DNAJA1P31689 397 aaKnown RBP20.97■□□□□ 0.95
SMAD1-201ENST00000302085 MC3RP41968 323 aa20.97■□□□□ 0.95
SMAD1-201ENST00000302085 BNIP3Q12983 259 aa20.97■□□□□ 0.95
SMAD1-201ENST00000302085 SYPL1Q16563 259 aa20.97■□□□□ 0.95
SMAD1-201ENST00000302085 ZC3H12BQ5HYM0 836 aaKnown RBP20.97■□□□□ 0.95
SMAD1-201ENST00000302085 OR56A1Q8NGH5 318 aa20.97■□□□□ 0.95
SMAD1-201ENST00000302085 KAT2AQ92830 837 aa20.97■□□□□ 0.95
SMAD1-201ENST00000302085 C16orf58Q96GQ5 468 aa20.97■□□□□ 0.95
SMAD1-201ENST00000302085 TCTN2Q96GX1 697 aa20.97■□□□□ 0.95
SMAD1-201ENST00000302085 MBOAT4Q96T53 435 aa20.97■□□□□ 0.95
SMAD1-201ENST00000302085 TOR3AQ9H497 397 aa20.97■□□□□ 0.95
SMAD1-201ENST00000302085 ANKRA2Q9H9E1 313 aa20.97■□□□□ 0.95
SMAD1-201ENST00000302085 PRDM9Q9NQV7 894 aa20.97■□□□□ 0.95
SMAD1-201ENST00000302085 PNPLA3Q9NST1 481 aa20.97■□□□□ 0.95
SMAD1-201ENST00000302085 TMEFF2Q9UIK5 374 aaPredicted RBP20.97■□□□□ 0.95
SMAD1-201ENST00000302085 SDK1Q7Z5N4 2213 aa20.97■□□□□ 0.95
SMAD1-201ENST00000302085 THADAQ6YHU6 1953 aa20.97■□□□□ 0.95
SMAD1-201ENST00000302085 DNAH14Q0VDD8 3507 aa20.97■□□□□ 0.95
SMAD1-201ENST00000302085 A0A1B0GTW7 788 aa20.97■□□□□ 0.95
SMAD1-201ENST00000302085 FPR1P21462 350 aa20.97■□□□□ 0.95
SMAD1-201ENST00000302085 MAGEA8P43361 318 aa20.97■□□□□ 0.95
SMAD1-201ENST00000302085 PRTGQ2VWP7 1150 aa20.97■□□□□ 0.95
SMAD1-201ENST00000302085 BHLHB9Q6PI77 547 aa20.97■□□□□ 0.95
SMAD1-201ENST00000302085 USP53Q70EK8 1073 aa20.97■□□□□ 0.95
SMAD1-201ENST00000302085 ARMC8Q8IUR7 673 aa20.97■□□□□ 0.95
SMAD1-201ENST00000302085 CA13Q8N1Q1 262 aa20.97■□□□□ 0.95
SMAD1-201ENST00000302085 LRRC25Q8N386 305 aaPredicted RBP20.97■□□□□ 0.95
SMAD1-201ENST00000302085 SLC25A45Q8N413 288 aa20.97■□□□□ 0.95
SMAD1-201ENST00000302085 ARL10Q8N8L6 244 aa20.97■□□□□ 0.95
SMAD1-201ENST00000302085 OTUB1Q96FW1 271 aaPredicted RBP20.97■□□□□ 0.95
SMAD1-201ENST00000302085 RDH12Q96NR8 316 aa20.97■□□□□ 0.95
SMAD1-201ENST00000302085 GABARAPL1Q9H0R8 117 aa20.97■□□□□ 0.95
SMAD1-201ENST00000302085 SAMHD1Q9Y3Z3 626 aaKnown RBP20.97■□□□□ 0.95
SMAD1-201ENST00000302085 RNF215Q9Y6U7 377 aa20.97■□□□□ 0.95
SMAD1-201ENST00000302085 SGK494L7N484 410 aa20.96■□□□□ 0.95
SMAD1-201ENST00000302085 CYR61O00622 381 aa20.96■□□□□ 0.95
SMAD1-201ENST00000302085 SLC28A2O43868 658 aa20.96■□□□□ 0.95
SMAD1-201ENST00000302085 MFN2O95140 757 aa20.96■□□□□ 0.95
SMAD1-201ENST00000302085 RECKO95980 971 aa20.96■□□□□ 0.95
SMAD1-201ENST00000302085 KHKP50053 298 aa20.96■□□□□ 0.95
SMAD1-201ENST00000302085 GFERP55789 205 aa20.96■□□□□ 0.95
SMAD1-201ENST00000302085 LASP1Q14847 261 aaKnown RBP20.96■□□□□ 0.95
SMAD1-201ENST00000302085 DUSP7Q16829 419 aa20.96■□□□□ 0.95
SMAD1-201ENST00000302085 NKAIN2Q5VXU1 208 aa20.96■□□□□ 0.95
SMAD1-201ENST00000302085 TMEM52Q8NDY8 209 aa20.96■□□□□ 0.95
SMAD1-201ENST00000302085 NUP43Q8NFH3 380 aa20.96■□□□□ 0.95
SMAD1-201ENST00000302085 MIPOL1Q8TD10 442 aa20.96■□□□□ 0.95
SMAD1-201ENST00000302085 REEP1Q9H902 201 aa20.96■□□□□ 0.95
SMAD1-201ENST00000302085 ERVMER34-1Q9H9K5 563 aa20.96■□□□□ 0.95
SMAD1-201ENST00000302085 C3orf14Q9HBI5 128 aa20.96■□□□□ 0.95
SMAD1-201ENST00000302085 CCDC163A0A0D9SF12 145 aa20.96■□□□□ 0.95
SMAD1-201ENST00000302085 RHPN2P1A8MT19 583 aa20.96■□□□□ 0.95
SMAD1-201ENST00000302085 FAM227AF5H4B4 570 aa20.96■□□□□ 0.95
SMAD1-201ENST00000302085 HS6ST1O60243 411 aa20.96■□□□□ 0.95
SMAD1-201ENST00000302085 CD247P20963 164 aa20.96■□□□□ 0.95
SMAD1-201ENST00000302085 BNC1Q01954 994 aa20.96■□□□□ 0.95
SMAD1-201ENST00000302085 NRBF2Q96F24 287 aa20.96■□□□□ 0.95
SMAD1-201ENST00000302085 TGM7Q96PF1 710 aa20.96■□□□□ 0.95
SMAD1-201ENST00000302085 LRIT1Q9P2V4 623 aa20.96■□□□□ 0.95
SMAD1-201ENST00000302085 P2RX2Q9UBL9 471 aa20.96■□□□□ 0.95
SMAD1-201ENST00000302085 EME2A4GXA9 379 aaPredicted RBP20.95■□□□□ 0.94
SMAD1-201ENST00000302085 H3BNH8 94 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms