RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 SMPDL3AQ92484 453 aa5.34□□□□□ -1.55
CPSF2-201ENST00000298875 MOAP1Q96BY2 351 aa5.34□□□□□ -1.55
CPSF2-201ENST00000298875 PIP5K1AQ99755 562 aa5.34□□□□□ -1.55
CPSF2-201ENST00000298875 ASF1BQ9NVP2 202 aa5.34□□□□□ -1.55
CPSF2-201ENST00000298875 PAQR5Q9NXK6 330 aaPredicted RBP5.34□□□□□ -1.55
CPSF2-201ENST00000298875 CLEC4EQ9ULY5 219 aa5.34□□□□□ -1.55
CPSF2-201ENST00000298875 TMEM98Q9Y2Y6 226 aa5.34□□□□□ -1.55
CPSF2-201ENST00000298875 LDB2O43679 373 aa5.34□□□□□ -1.55
CPSF2-201ENST00000298875 CLDN7O95471 211 aa5.34□□□□□ -1.55
CPSF2-201ENST00000298875 CAMLGP49069 296 aa5.34□□□□□ -1.55
CPSF2-201ENST00000298875 ID2Q02363 134 aa5.34□□□□□ -1.55
CPSF2-201ENST00000298875 KCNJ11Q14654 390 aa5.34□□□□□ -1.55
CPSF2-201ENST00000298875 PIGGQ5H8A4 983 aa5.34□□□□□ -1.55
CPSF2-201ENST00000298875 GPR157Q5UAW9 335 aa5.34□□□□□ -1.55
CPSF2-201ENST00000298875 PPP2R2DQ66LE6 453 aa5.34□□□□□ -1.55
CPSF2-201ENST00000298875 DRICH1Q6PGQ1 229 aaPredicted RBP5.34□□□□□ -1.55
CPSF2-201ENST00000298875 TMPRSS12Q86WS5 348 aa5.34□□□□□ -1.55
CPSF2-201ENST00000298875 OR6N1Q8NGY5 312 aa5.34□□□□□ -1.55
CPSF2-201ENST00000298875 C2orf15Q8WU43 125 aaKnown RBP5.34□□□□□ -1.55
CPSF2-201ENST00000298875 ERVK13-1Q9NX77 482 aa5.34□□□□□ -1.55
CPSF2-201ENST00000298875 EPHA6Q9UF33 1036 aa5.34□□□□□ -1.55
CPSF2-201ENST00000298875 PCTPQ9UKL6 214 aa5.34□□□□□ -1.55
CPSF2-201ENST00000298875 CAMTA1Q9Y6Y1 1673 aa5.34□□□□□ -1.55
CPSF2-201ENST00000298875 PAHP00439 452 aa5.34□□□□□ -1.55
CPSF2-201ENST00000298875 CFIP05156 583 aa5.34□□□□□ -1.55
CPSF2-201ENST00000298875 TRAPPC2P0DI81 140 aa5.34□□□□□ -1.55
CPSF2-201ENST00000298875 TRAPPC2BP0DI82 140 aa5.34□□□□□ -1.55
CPSF2-201ENST00000298875 IL1R2P27930 398 aa5.34□□□□□ -1.55
CPSF2-201ENST00000298875 SOX2P48431 317 aa5.34□□□□□ -1.55
CPSF2-201ENST00000298875 TRAM2Q15035 370 aa5.34□□□□□ -1.55
CPSF2-201ENST00000298875 SSX9Q7RTT3 188 aa5.34□□□□□ -1.55
CPSF2-201ENST00000298875 RAB8BQ92930 207 aa5.34□□□□□ -1.55
CPSF2-201ENST00000298875 SLC25A44Q96H78 314 aaPredicted RBP5.34□□□□□ -1.55
CPSF2-201ENST00000298875 SH3YL1Q96HL8 342 aaPredicted RBP5.34□□□□□ -1.55
CPSF2-201ENST00000298875 C17orf62Q9BQA9 187 aa5.34□□□□□ -1.55
CPSF2-201ENST00000298875 RBCK1Q9BYM8 510 aa5.34□□□□□ -1.55
CPSF2-201ENST00000298875 SLC28A3Q9HAS3 691 aa5.34□□□□□ -1.55
CPSF2-201ENST00000298875 APOBEC3GQ9HC16 384 aaKnown RBP5.34□□□□□ -1.55
CPSF2-201ENST00000298875 A8MVJ9 347 aa5.34□□□□□ -1.56
CPSF2-201ENST00000298875 F5H0A9 414 aaPredicted RBP5.34□□□□□ -1.56
CPSF2-201ENST00000298875 INMT-MINDY4F8WBC2 141 aa5.34□□□□□ -1.56
CPSF2-201ENST00000298875 BHLHE40O14503 412 aa5.34□□□□□ -1.56
CPSF2-201ENST00000298875 HTRA2O43464 458 aaPredicted RBP5.34□□□□□ -1.56
CPSF2-201ENST00000298875 ZNF821O75541 412 aaPredicted RBP5.34□□□□□ -1.56
CPSF2-201ENST00000298875 CDC123O75794 336 aaPredicted RBP5.34□□□□□ -1.56
CPSF2-201ENST00000298875 GRPRP30550 384 aa5.34□□□□□ -1.56
CPSF2-201ENST00000298875 ARL2P36404 184 aa5.34□□□□□ -1.56
CPSF2-201ENST00000298875 GPR4P46093 362 aa5.34□□□□□ -1.56
CPSF2-201ENST00000298875 LUMP51884 338 aaPredicted RBP5.34□□□□□ -1.56
CPSF2-201ENST00000298875 C2orf27AQ580R0 203 aa5.34□□□□□ -1.56
CPSF2-201ENST00000298875 GLT8D1Q68CQ7 371 aa5.34□□□□□ -1.56
CPSF2-201ENST00000298875 OR4E2Q8NGC2 313 aa5.34□□□□□ -1.56
CPSF2-201ENST00000298875 PTCHD1Q96NR3 888 aa5.34□□□□□ -1.56
CPSF2-201ENST00000298875 BTBD1Q9H0C5 482 aa5.34□□□□□ -1.56
CPSF2-201ENST00000298875 MTG2Q9H4K7 406 aa5.34□□□□□ -1.56
CPSF2-201ENST00000298875 LYRM2Q9NU23 88 aaPredicted RBP5.34□□□□□ -1.56
CPSF2-201ENST00000298875 FAM120CQ9NX05 1096 aaKnown RBP5.34□□□□□ -1.56
CPSF2-201ENST00000298875 LRFN1Q9P244 771 aa5.34□□□□□ -1.56
CPSF2-201ENST00000298875 REV1Q9UBZ9 1251 aa5.34□□□□□ -1.56
CPSF2-201ENST00000298875 UNC119BA6NIH7 251 aa5.34□□□□□ -1.56
CPSF2-201ENST00000298875 BRINP1O60477 761 aa5.34□□□□□ -1.56
CPSF2-201ENST00000298875 CKMT1AP12532 417 aa5.34□□□□□ -1.56
CPSF2-201ENST00000298875 GNSP15586 552 aa5.34□□□□□ -1.56
CPSF2-201ENST00000298875 DPP6P42658 865 aa5.34□□□□□ -1.56
CPSF2-201ENST00000298875 MAP2K3P46734 347 aa5.34□□□□□ -1.56
CPSF2-201ENST00000298875 POU4F2Q12837 409 aa5.34□□□□□ -1.56
CPSF2-201ENST00000298875 ITPRIPL2Q3MIP1 535 aa5.34□□□□□ -1.56
CPSF2-201ENST00000298875 CEACAM19Q7Z692 300 aa5.34□□□□□ -1.56
CPSF2-201ENST00000298875 PSD2Q9BQI7 771 aa5.34□□□□□ -1.56
CPSF2-201ENST00000298875 GLTPQ9NZD2 209 aa5.34□□□□□ -1.56
CPSF2-201ENST00000298875 SARDHQ9UL12 918 aa5.34□□□□□ -1.56
CPSF2-201ENST00000298875 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.33□□□□□ -1.56
CPSF2-201ENST00000298875 CASC3O15234 703 aaKnown RBP5.33□□□□□ -1.56
CPSF2-201ENST00000298875 H2BFMP0C1H6 154 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 HLA-EP13747 358 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 NKX2-5P52952 324 aaPredicted RBP5.33□□□□□ -1.56
CPSF2-201ENST00000298875 RPS27AP62979 156 aaKnown RBP5.33□□□□□ -1.56
CPSF2-201ENST00000298875 UBA52P62987 128 aaKnown RBP5.33□□□□□ -1.56
CPSF2-201ENST00000298875 SLC25A11Q02978 314 aaKnown RBP5.33□□□□□ -1.56
CPSF2-201ENST00000298875 MFSD13AQ14CX5 517 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 CYP1B1Q16678 543 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 EXOC3L2Q2M3D2 409 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 ARHGAP40Q5TG30 622 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 CFAP77Q6ZQR2 320 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 RPLP0P6Q8NHW5 317 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 WDR20Q8TBZ3 569 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 ZNF486Q96H40 463 aaPredicted RBP5.33□□□□□ -1.56
CPSF2-201ENST00000298875 OSBPL2Q9H1P3 480 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 ATG4BQ9Y4P1 393 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 CCDC88AQ3V6T2 1871 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 A0A1W2PPW3 197 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 BOLA2-SMG1P6H3BVE0 249 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 CLEC3AO75596 197 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 HSD11B2P80365 405 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 NCBP2-AS2Q69YL0 99 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 FBXO46Q6PJ61 603 aaPredicted RBP5.33□□□□□ -1.56
CPSF2-201ENST00000298875 IRF2BP1Q8IU81 584 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 SCML4Q8N228 414 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 DNTTIP1Q9H147 329 aa5.33□□□□□ -1.56
CPSF2-201ENST00000298875 PCED1AQ9H1Q7 454 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms