RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 C1orf216Q8TAB5 229 aa16.89■□□□□ 0.29
CDC42EP3-201ENST00000295324 THRSPQ92748 146 aa16.89■□□□□ 0.29
CDC42EP3-201ENST00000295324 IGSF5Q9NSI5 407 aa16.89■□□□□ 0.29
CDC42EP3-201ENST00000295324 PDLIM1O00151 329 aa16.88■□□□□ 0.29
CDC42EP3-201ENST00000295324 ARL6IP5O75915 188 aa16.88■□□□□ 0.29
CDC42EP3-201ENST00000295324 ZNF100Q8IYN0 542 aa16.88■□□□□ 0.29
CDC42EP3-201ENST00000295324 FANK1Q8TC84 345 aa16.88■□□□□ 0.29
CDC42EP3-201ENST00000295324 SP140LQ9H930 580 aa16.88■□□□□ 0.29
CDC42EP3-201ENST00000295324 ANKRD36CQ5JPF3 1778 aa16.88■□□□□ 0.29
CDC42EP3-201ENST00000295324 FAM189A1O60320 539 aa16.88■□□□□ 0.29
CDC42EP3-201ENST00000295324 CSNK1EP49674 416 aaKnown RBP16.88■□□□□ 0.29
CDC42EP3-201ENST00000295324 TSC22D1Q15714 1073 aa16.88■□□□□ 0.29
CDC42EP3-201ENST00000295324 FIGNL1Q6PIW4 674 aa16.88■□□□□ 0.29
CDC42EP3-201ENST00000295324 ASB16Q96NS5 453 aa16.88■□□□□ 0.29
CDC42EP3-201ENST00000295324 GAL3ST1Q99999 423 aa16.88■□□□□ 0.29
CDC42EP3-201ENST00000295324 EHD1Q9H4M9 534 aa16.88■□□□□ 0.29
CDC42EP3-201ENST00000295324 GMEB1Q9Y692 573 aa16.88■□□□□ 0.29
CDC42EP3-201ENST00000295324 A0A1B0GVI7 797 aa16.88■□□□□ 0.29
CDC42EP3-201ENST00000295324 PLD2O14939 933 aa16.88■□□□□ 0.29
CDC42EP3-201ENST00000295324 EEDO75530 441 aaKnown RBP16.88■□□□□ 0.29
CDC42EP3-201ENST00000295324 H6PDO95479 791 aa16.88■□□□□ 0.29
CDC42EP3-201ENST00000295324 OR1E2P47887 323 aa16.88■□□□□ 0.29
CDC42EP3-201ENST00000295324 SH3BP2P78314 561 aa16.88■□□□□ 0.29
CDC42EP3-201ENST00000295324 SMAD4Q13485 552 aaKnown RBP16.88■□□□□ 0.29
CDC42EP3-201ENST00000295324 OLFML2AQ68BL7 652 aa16.88■□□□□ 0.29
CDC42EP3-201ENST00000295324 PPP1R3BQ86XI6 285 aa16.88■□□□□ 0.29
CDC42EP3-201ENST00000295324 UBQLNLQ8IYU4 475 aa16.88■□□□□ 0.29
CDC42EP3-201ENST00000295324 ALDH16A1Q8IZ83 802 aa16.88■□□□□ 0.29
CDC42EP3-201ENST00000295324 SLC5A8Q8N695 610 aa16.88■□□□□ 0.29
CDC42EP3-201ENST00000295324 FKBP10Q96AY3 582 aa16.88■□□□□ 0.29
CDC42EP3-201ENST00000295324 FAM210AQ96ND0 272 aa16.88■□□□□ 0.29
CDC42EP3-201ENST00000295324 CXCL16Q9H2A7 254 aa16.88■□□□□ 0.29
CDC42EP3-201ENST00000295324 MARCH7Q9H992 704 aa16.88■□□□□ 0.29
CDC42EP3-201ENST00000295324 ING3Q9NXR8 418 aa16.88■□□□□ 0.29
CDC42EP3-201ENST00000295324 SOX14O95416 240 aa16.88■□□□□ 0.29
CDC42EP3-201ENST00000295324 KLKB1P03952 638 aa16.88■□□□□ 0.29
CDC42EP3-201ENST00000295324 GMFBP60983 142 aa16.88■□□□□ 0.29
CDC42EP3-201ENST00000295324 TIGD6Q17RP2 521 aa16.88■□□□□ 0.29
CDC42EP3-201ENST00000295324 C18orf21Q32NC0 220 aaPredicted RBP16.88■□□□□ 0.29
CDC42EP3-201ENST00000295324 C1orf94Q6P1W5 598 aa16.88■□□□□ 0.29
CDC42EP3-201ENST00000295324 ARL9Q6T311 187 aa16.88■□□□□ 0.29
CDC42EP3-201ENST00000295324 TMPPEQ6ZT21 453 aa16.88■□□□□ 0.29
CDC42EP3-201ENST00000295324 AGBL5Q8NDL9 886 aa16.88■□□□□ 0.29
CDC42EP3-201ENST00000295324 MYLIPQ8WY64 445 aa16.88■□□□□ 0.29
CDC42EP3-201ENST00000295324 TREX1Q9NSU2 369 aa16.88■□□□□ 0.29
CDC42EP3-201ENST00000295324 PTRH2Q9Y3E5 179 aaKnown RBP16.88■□□□□ 0.29
CDC42EP3-201ENST00000295324 C11orf98E9PRG8 122 aa16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 EIF1AYO14602 144 aaKnown RBP16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 VBP1P61758 197 aa16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 ADAM8P78325 824 aa16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 LAMP5Q9UJQ1 280 aa16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 MYH4Q9Y623 1939 aa16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 A0A1W2PRQ8 180 aa16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 FAAHO00519 579 aa16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 VILLO15195 856 aa16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 C8BP07358 591 aa16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 ALDH3A2P51648 485 aa16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 SF3B4Q15427 424 aaKnown RBP eCLIP16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 CES4AQ5XG92 561 aa16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 TANKQ92844 425 aa16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 HDAC8Q9BY41 377 aa16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 KATNBL1Q9H079 304 aa16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 PCDHB16Q9NRJ7 776 aa16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 SLC39A1Q9NY26 324 aa16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 N4BP2Q86UW6 1770 aaPredicted RBP16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 C17orf113A0A1B0GUU1 675 aa16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 OR3A3P47888 321 aa16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 OR3A2P47893 321 aa16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 ARFRP1Q13795 201 aa16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 BLOC1S3Q6QNY0 202 aa16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 STON2Q8WXE9 905 aa16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 ARRDC3Q96B67 414 aa16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 WDR77Q9BQA1 342 aaPredicted RBP16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 A0A1W2PPL8 197 aa16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 EME2A4GXA9 379 aaPredicted RBP16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 ADORA3P0DMS8 318 aa16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 HTR1EP28566 365 aa16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 SHQ1Q6PI26 577 aaKnown RBP16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 PARM1Q6UWI2 310 aa16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 ZSWIM9Q86XI8 627 aa16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 NPLQ9BXD5 320 aaPredicted RBP16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 ACTRT3Q9BYD9 372 aa16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 PBX4Q9BYU1 374 aa16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 A0A0A6YYC8 382 aaPredicted RBP16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 LOC100130705A0A1B0GUX0 176 aa16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 I3L1I5 382 aaPredicted RBP16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 SDR16C5Q8N3Y7 309 aa16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 CLEC1AQ8NC01 280 aa16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 CEP76Q8TAP6 659 aa16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 TM9SF4Q92544 642 aa16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 ANKRA2Q9H9E1 313 aa16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 PTGDR2Q9Y5Y4 395 aa16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 FKBP7Q9Y680 259 aa16.87■□□□□ 0.29
CDC42EP3-201ENST00000295324 C1SP09871 688 aa16.86■□□□□ 0.29
CDC42EP3-201ENST00000295324 MVKQ03426 396 aa16.86■□□□□ 0.29
CDC42EP3-201ENST00000295324 IL18R1Q13478 541 aa16.86■□□□□ 0.29
CDC42EP3-201ENST00000295324 IER5LQ5T953 404 aa16.86■□□□□ 0.29
CDC42EP3-201ENST00000295324 TM9SF2Q99805 663 aa16.86■□□□□ 0.29
CDC42EP3-201ENST00000295324 MAST2Q6P0Q8 1798 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms