RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 ADAMTS15Q8TE58 950 aa7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 DDA1Q9BW61 102 aa7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 C1orf21Q9H246 121 aa7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 RXFP3Q9NSD7 469 aa7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 CDC14AQ9UNH5 594 aa7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 HEMK1Q9Y5R4 338 aaPredicted RBP7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 TMEM150CB9EJG8 249 aa7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 ALBP02768 609 aa7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 ALOX5P09917 674 aa7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 DDCP20711 480 aa7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 IDH2P48735 452 aaKnown RBP7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 C16orf72Q14CZ0 275 aa7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 MLC1Q15049 377 aa7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 SPATS1Q496A3 300 aa7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 ARHGAP40Q5TG30 622 aa7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 PLD3Q8IV08 490 aa7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 NLGN4XQ8N0W4 816 aa7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 BMPERQ8N8U9 685 aa7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 UXS1Q8NBZ7 420 aa7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 WDR36Q8NI36 951 aaKnown RBP7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 LRFN5Q96NI6 719 aa7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 RTKNQ9BST9 563 aa7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 KLHL31Q9H511 634 aa7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 ANKHQ9HCJ1 492 aa7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 CTPS2Q9NRF8 586 aa7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 SCOCQ9UIL1 159 aa7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 PAIP2BQ9ULR5 123 aaKnown RBP7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 GMEB1Q9Y692 573 aa7.96□□□□□ -1.13
PTPDC1-201ENST00000288976 C1orf226A1L170 272 aa7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 C4orf51C9J302 202 aa7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 SLC30A4O14863 429 aa7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 CDC123O75794 336 aaPredicted RBP7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 POLR2JP52435 117 aaKnown RBP7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 RAB38P57729 211 aa7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 BNIP1Q12981 228 aa7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 CEBPEQ15744 281 aa7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 EPHX4Q8IUS5 362 aa7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 TMEM126BQ8IUX1 230 aa7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 RNF175Q8N4F7 328 aa7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 ZSCAN1Q8NBB4 408 aa7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 VPS33AQ96AX1 596 aa7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 TM4SF18Q96CE8 201 aa7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 DNAJA3Q96EY1 480 aa7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 TEFMQ96QE5 360 aaKnown RBP7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 ACTL8Q9H568 366 aa7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 REEP4Q9H6H4 257 aa7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 SLC52A3Q9NQ40 469 aa7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 TAS2R7Q9NYW3 318 aa7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 POU2F3Q9UKI9 436 aa7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 DLGAP4Q9Y2H0 992 aa7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 NDUFAF1Q9Y375 327 aa7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 HYKKA2RU49 373 aa7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 TM4SF5O14894 197 aa7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 COX4I1P13073 169 aa7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 CEACAM1P13688 526 aa7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 AHCYP23526 432 aa7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 CASRP41180 1078 aa7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 MAPK12P53778 367 aa7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 DIO3P55073 304 aa7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 CSNK2BP67870 215 aa7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 TNFRSF17Q02223 184 aa7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 CYLC2Q14093 348 aaPredicted RBP7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 HEPACAMQ14CZ8 416 aa7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 HKDC1Q2TB90 917 aa7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 ANXA8L1Q5VT79 327 aa7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 TMEM198Q66K66 360 aa7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 KLHL24Q6TFL4 600 aa7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 IGF2-ASQ6U949 168 aa7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 SAMD14Q8IZD0 417 aaPredicted RBP7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 ACOT4Q8N9L9 421 aa7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 NLGN4YQ8NFZ3 816 aaPredicted RBP7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 OR1L3Q8NH93 324 aa7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 ROPN1LQ96C74 230 aa7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 COQ8BQ96D53 544 aa7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 NSL1Q96IY1 281 aa7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 FAM120CQ9NX05 1096 aaKnown RBP7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 RARRES3Q9UL19 164 aa7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 ASB4Q9Y574 426 aa7.96□□□□□ -1.14
PTPDC1-201ENST00000288976 ZNF860A6NHJ4 632 aa7.95□□□□□ -1.14
PTPDC1-201ENST00000288976 SAP18O00422 153 aaKnown RBP7.95□□□□□ -1.14
PTPDC1-201ENST00000288976 SLITRK5O94991 958 aa7.95□□□□□ -1.14
PTPDC1-201ENST00000288976 SNRPB2P08579 225 aaKnown RBP7.95□□□□□ -1.14
PTPDC1-201ENST00000288976 FAM58BPP0C7Q3 252 aa7.95□□□□□ -1.14
PTPDC1-201ENST00000288976 FOLR1P15328 257 aa7.95□□□□□ -1.14
PTPDC1-201ENST00000288976 FRKP42685 505 aaPredicted RBP7.95□□□□□ -1.14
PTPDC1-201ENST00000288976 GFOD2Q3B7J2 385 aa7.95□□□□□ -1.14
PTPDC1-201ENST00000288976 FAM219BQ5XKK7 198 aa7.95□□□□□ -1.14
PTPDC1-201ENST00000288976 ZNF793Q6ZN11 406 aa7.95□□□□□ -1.14
PTPDC1-201ENST00000288976 ASCL5Q7RTU5 278 aa7.95□□□□□ -1.14
PTPDC1-201ENST00000288976 CA13Q8N1Q1 262 aa7.95□□□□□ -1.14
PTPDC1-201ENST00000288976 C17orf62Q9BQA9 187 aa7.95□□□□□ -1.14
PTPDC1-201ENST00000288976 NDC1Q9BTX1 674 aa7.95□□□□□ -1.14
PTPDC1-201ENST00000288976 EFCAB1Q9HAE3 211 aa7.95□□□□□ -1.14
PTPDC1-201ENST00000288976 CUTCQ9NTM9 273 aa7.95□□□□□ -1.14
PTPDC1-201ENST00000288976 COPS7AQ9UBW8 275 aa7.95□□□□□ -1.14
PTPDC1-201ENST00000288976 GIMAP2Q9UG22 337 aa7.95□□□□□ -1.14
PTPDC1-201ENST00000288976 ATXN7L1Q9ULK2 861 aaPredicted RBP7.95□□□□□ -1.14
PTPDC1-201ENST00000288976 MAN2B2Q9Y2E5 1009 aa7.95□□□□□ -1.14
PTPDC1-201ENST00000288976 PI4KAP42356 2102 aa7.95□□□□□ -1.14
PTPDC1-201ENST00000288976 OR2B3O76000 313 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms