RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 DNAJC22Q8N4W6 341 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 BTF3L4Q96K17 158 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 TSGA13Q96PP4 275 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 DERL2Q9GZP9 239 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 MEAF6Q9HAF1 191 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 WDR45Q9Y484 360 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 ASB3Q9Y575 518 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 C11orf98E9PRG8 122 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 B4GALT5O43286 388 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 TGFB1P01137 390 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 AFF3P51826 1226 aaKnown RBP8.38□□□□□ -1.07
NIPBL-201ENST00000282516 CAMK2DQ13557 499 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 ELP2Q6IA86 826 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 GPR137CQ8N3F9 429 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 OR1J4Q8NGS1 313 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 TAAR8Q969N4 342 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 TBC1D20Q96BZ9 403 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 GPR20Q99678 358 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 PITX2Q99697 317 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 GLIS2Q9BZE0 524 aaPredicted RBP8.38□□□□□ -1.07
NIPBL-201ENST00000282516 GPR88Q9GZN0 384 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 KCNJ16Q9NPI9 418 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 DIP2BQ9P265 1576 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 PRSS51A0A1B0GVH4 220 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 MTMR11A4FU01 709 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 A6NHS1 94 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 SLC22A31A6NKX4 558 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 CELP19835 753 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 CSKP41240 450 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 RAB35Q15286 201 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 CARD17Q5XLA6 110 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 TPGS2Q68CL5 300 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 TMEM53Q6P2H8 277 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 FNDC9Q8TBE3 224 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 TSPEARQ8WU66 669 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 BIRC7Q96CA5 298 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 ZDHHC12Q96GR4 267 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 FBXL20Q96IG2 436 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 P2RY13Q9BPV8 354 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 MAF1Q9H063 256 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 TP63Q9H3D4 680 aaPredicted RBP8.38□□□□□ -1.07
NIPBL-201ENST00000282516 TUBB1Q9H4B7 451 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 CNOT11Q9UKZ1 510 aaKnown RBP8.38□□□□□ -1.07
NIPBL-201ENST00000282516 ST14Q9Y5Y6 855 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 ATRNO75882 1429 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 AKAP6Q13023 2319 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 FAM221BA6H8Z2 402 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 JAM2P57087 298 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 PLCXD2Q0VAA5 305 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 KCNC3Q14003 757 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 KCNJ11Q14654 390 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 FAM83FQ8NEG4 500 aaPredicted RBP8.38□□□□□ -1.07
NIPBL-201ENST00000282516 RAB39BQ96DA2 213 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 OR1F2PQ96R84 312 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 IL25Q9H293 177 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 PPIL3Q9H2H8 161 aaKnown RBP8.38□□□□□ -1.07
NIPBL-201ENST00000282516 TCEAL2Q9H3H9 227 aaPredicted RBP8.38□□□□□ -1.07
NIPBL-201ENST00000282516 XPNPEP1Q9NQW7 623 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 PPM1HQ9ULR3 514 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 PCDHA2Q9Y5H9 948 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 SETD1AO15047 1707 aaKnown RBP8.38□□□□□ -1.07
NIPBL-201ENST00000282516 NAP1L6A6NFF2 107 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 KLRC4O43908 158 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 NIPSNAP2O75323 286 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 SNCGO76070 127 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 SLC18A1P54219 525 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 KIAA0895LQ68EN5 471 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 OR4F3Q6IEY1 312 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 TCEANCQ8N8B7 351 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 SPTSSAQ969W0 71 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 FUBP3Q96I24 572 aaKnown RBP eCLIP8.38□□□□□ -1.07
NIPBL-201ENST00000282516 ACTRT3Q9BYD9 372 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 C2CD4BA6NLJ0 364 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 RDH16O75452 317 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 NAA10P41227 235 aaPredicted RBP8.38□□□□□ -1.07
NIPBL-201ENST00000282516 BRCC3P46736 316 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 CLCNKBP51801 687 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 UBE2NP61088 152 aaKnown RBP8.38□□□□□ -1.07
NIPBL-201ENST00000282516 VARS2Q5ST30 1063 aaKnown RBP8.38□□□□□ -1.07
NIPBL-201ENST00000282516 FAM205BPQ63HN1 556 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 TMEM198Q66K66 360 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 CREB3L2Q70SY1 520 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 NRROSQ86YC3 692 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 C3orf49Q96BT1 292 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 FAXDC2Q96IV6 333 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 TXNDC15Q96J42 360 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 COQ10AQ96MF6 247 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 CDK15Q96Q40 435 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 MCHR1Q99705 422 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 LUZP4Q9P127 313 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 AOC2O75106 756 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 LYPLA2O95372 231 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 EPHA1P21709 976 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 SLC35F1Q5T1Q4 408 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 HS6ST2Q96MM7 605 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 KREMEN1Q96MU8 473 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 SNX18Q96RF0 628 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 NELL2Q99435 816 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 ZNF559Q9BR84 538 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 SLC2A11Q9BYW1 496 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms