RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 ALDH6A1Q02252 535 aaKnown RBP21.27■■□□□ 1
LSM4-201ENST00000252816 IFFO1Q0D2I5 559 aa21.27■■□□□ 1
LSM4-201ENST00000252816 IL20RBQ6UXL0 311 aa21.27■■□□□ 1
LSM4-201ENST00000252816 C10orf107Q8IVU9 208 aa21.27■■□□□ 1
LSM4-201ENST00000252816 SIAH3Q8IW03 269 aa21.27■■□□□ 1
LSM4-201ENST00000252816 SULF2Q8IWU5 870 aa21.27■■□□□ 1
LSM4-201ENST00000252816 GBP7Q8N8V2 638 aaPredicted RBP21.27■■□□□ 1
LSM4-201ENST00000252816 BANPQ8N9N5 519 aa21.27■■□□□ 1
LSM4-201ENST00000252816 FAM98AQ8NCA5 519 aaKnown RBP21.27■■□□□ 1
LSM4-201ENST00000252816 OR4K14Q8NGD5 310 aa21.27■■□□□ 1
LSM4-201ENST00000252816 OR5L2Q8NGL0 311 aa21.27■■□□□ 1
LSM4-201ENST00000252816 NUBPLQ8TB37 319 aa21.27■■□□□ 1
LSM4-201ENST00000252816 APIPQ96GX9 242 aa21.27■■□□□ 1
LSM4-201ENST00000252816 APOPT1Q96IL0 206 aa21.27■■□□□ 1
LSM4-201ENST00000252816 ART5Q96L15 291 aa21.27■■□□□ 1
LSM4-201ENST00000252816 CXorf21Q9HAI6 301 aa21.27■■□□□ 1
LSM4-201ENST00000252816 HPF1Q9NWY4 346 aa21.27■■□□□ 1
LSM4-201ENST00000252816 MKS1Q9NXB0 559 aa21.27■■□□□ 1
LSM4-201ENST00000252816 ERVK-11Q9UQG0 969 aa21.27■■□□□ 1
LSM4-201ENST00000252816 KLF13Q9Y2Y9 288 aaPredicted RBP21.27■■□□□ 1
LSM4-201ENST00000252816 PLLPQ9Y342 182 aa21.27■■□□□ 1
LSM4-201ENST00000252816 DOPEY1Q5JWR5 2465 aa21.27■□□□□ 0.99
LSM4-201ENST00000252816 ICE1Q9Y2F5 2266 aa21.26■□□□□ 0.99
LSM4-201ENST00000252816 WIPF3A6NGB9 483 aa21.26■□□□□ 0.99
LSM4-201ENST00000252816 STSP08842 583 aa21.26■□□□□ 0.99
LSM4-201ENST00000252816 XKP51811 444 aa21.26■□□□□ 0.99
LSM4-201ENST00000252816 RAE1P78406 368 aaKnown RBP21.26■□□□□ 0.99
LSM4-201ENST00000252816 ASPHQ12797 758 aa21.26■□□□□ 0.99
LSM4-201ENST00000252816 PCLAFQ15004 111 aa21.26■□□□□ 0.99
LSM4-201ENST00000252816 C4orf17Q53FE4 359 aa21.26■□□□□ 0.99
LSM4-201ENST00000252816 CFAP157Q5JU67 520 aa21.26■□□□□ 0.99
LSM4-201ENST00000252816 GPALPP1Q8IXQ4 340 aa21.26■□□□□ 0.99
LSM4-201ENST00000252816 ROPN1BQ9BZX4 212 aaPredicted RBP21.26■□□□□ 0.99
LSM4-201ENST00000252816 ROPN1Q9HAT0 212 aaPredicted RBP21.26■□□□□ 0.99
LSM4-201ENST00000252816 C1orf226A1L170 272 aa21.25■□□□□ 0.99
LSM4-201ENST00000252816 NPIPA5E9PKD4 350 aa21.25■□□□□ 0.99
LSM4-201ENST00000252816 LRRTM2O43300 516 aa21.25■□□□□ 0.99
LSM4-201ENST00000252816 GUCY1B2O75343 617 aa21.25■□□□□ 0.99
LSM4-201ENST00000252816 CT62P0C5K7 136 aa21.25■□□□□ 0.99
LSM4-201ENST00000252816 SERPINB3P29508 390 aa21.25■□□□□ 0.99
LSM4-201ENST00000252816 MEOX1P50221 254 aa21.25■□□□□ 0.99
LSM4-201ENST00000252816 SLC37A1P57057 533 aa21.25■□□□□ 0.99
LSM4-201ENST00000252816 GPR85P60893 370 aa21.25■□□□□ 0.99
LSM4-201ENST00000252816 NAA20P61599 178 aa21.25■□□□□ 0.99
LSM4-201ENST00000252816 MPEG1Q2M385 716 aa21.25■□□□□ 0.99
LSM4-201ENST00000252816 PIGGQ5H8A4 983 aa21.25■□□□□ 0.99
LSM4-201ENST00000252816 LIPMQ5VYY2 423 aa21.25■□□□□ 0.99
LSM4-201ENST00000252816 SLC48A1Q6P1K1 146 aa21.25■□□□□ 0.99
LSM4-201ENST00000252816 SRRM1Q8IYB3 904 aaKnown RBP21.25■□□□□ 0.99
LSM4-201ENST00000252816 MREGQ8N565 214 aa21.25■□□□□ 0.99
LSM4-201ENST00000252816 C11orf24Q96F05 449 aaPredicted RBP21.25■□□□□ 0.99
LSM4-201ENST00000252816 GPR137Q96N19 417 aa21.25■□□□□ 0.99
LSM4-201ENST00000252816 SHCBP1LQ9BZQ2 653 aa21.25■□□□□ 0.99
LSM4-201ENST00000252816 TIMMDC1Q9NPL8 285 aa21.25■□□□□ 0.99
LSM4-201ENST00000252816 DEPPQ9NTK1 212 aa21.25■□□□□ 0.99
LSM4-201ENST00000252816 HEY2Q9UBP5 337 aa21.25■□□□□ 0.99
LSM4-201ENST00000252816 MCM8Q9UJA3 840 aa21.25■□□□□ 0.99
LSM4-201ENST00000252816 NPIPA1Q9UND3 350 aa21.25■□□□□ 0.99
LSM4-201ENST00000252816 SERTM1A2A2V5 107 aa21.24■□□□□ 0.99
LSM4-201ENST00000252816 CCDC151A5D8V7 595 aa21.24■□□□□ 0.99
LSM4-201ENST00000252816 PEX1O43933 1283 aa21.24■□□□□ 0.99
LSM4-201ENST00000252816 NADKO95544 446 aaPredicted RBP21.24■□□□□ 0.99
LSM4-201ENST00000252816 CPMP14384 443 aa21.24■□□□□ 0.99
LSM4-201ENST00000252816 SSTR4P31391 388 aa21.24■□□□□ 0.99
LSM4-201ENST00000252816 RFC3P40938 356 aa21.24■□□□□ 0.99
LSM4-201ENST00000252816 TRA2BP62995 288 aaKnown RBP21.24■□□□□ 0.99
LSM4-201ENST00000252816 C1QL3Q5VWW1 255 aa21.24■□□□□ 0.99
LSM4-201ENST00000252816 RNF111Q6ZNA4 994 aa21.24■□□□□ 0.99
LSM4-201ENST00000252816 PSD4Q8NDX1 1056 aa21.24■□□□□ 0.99
LSM4-201ENST00000252816 GATA5Q9BWX5 397 aaPredicted RBP21.24■□□□□ 0.99
LSM4-201ENST00000252816 KLRC4-KLRK1H3BQV0 150 aa21.23■□□□□ 0.99
LSM4-201ENST00000252816 PCDH7O60245 1069 aa21.23■□□□□ 0.99
LSM4-201ENST00000252816 SPAG7O75391 227 aa21.23■□□□□ 0.99
LSM4-201ENST00000252816 CREB1P16220 341 aa21.23■□□□□ 0.99
LSM4-201ENST00000252816 PORP16435 677 aaPredicted RBP21.23■□□□□ 0.99
LSM4-201ENST00000252816 ZNF24P17028 368 aa21.23■□□□□ 0.99
LSM4-201ENST00000252816 DUSP2Q05923 314 aa21.23■□□□□ 0.99
LSM4-201ENST00000252816 BTKQ06187 659 aa21.23■□□□□ 0.99
LSM4-201ENST00000252816 ACSM2AQ08AH3 577 aa21.23■□□□□ 0.99
LSM4-201ENST00000252816 EBPQ15125 230 aaKnown RBP21.23■□□□□ 0.99
LSM4-201ENST00000252816 SPIN4Q56A73 249 aa21.23■□□□□ 0.99
LSM4-201ENST00000252816 ACSM2BQ68CK6 577 aa21.23■□□□□ 0.99
LSM4-201ENST00000252816 FAM180BQ6P0A1 224 aa21.23■□□□□ 0.99
LSM4-201ENST00000252816 LYPD8Q6UX82 237 aa21.23■□□□□ 0.99
LSM4-201ENST00000252816 GALNT12Q8IXK2 581 aa21.23■□□□□ 0.99
LSM4-201ENST00000252816 FAM111AQ96PZ2 611 aa21.23■□□□□ 0.99
LSM4-201ENST00000252816 GAL3ST4Q96RP7 486 aa21.23■□□□□ 0.99
LSM4-201ENST00000252816 TMEM109Q9BVC6 243 aa21.23■□□□□ 0.99
LSM4-201ENST00000252816 WWTR1Q9GZV5 400 aa21.23■□□□□ 0.99
LSM4-201ENST00000252816 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.23■□□□□ 0.99
LSM4-201ENST00000252816 SLC17A7Q9P2U7 560 aa21.23■□□□□ 0.99
LSM4-201ENST00000252816 MID2Q9UJV3 735 aa21.23■□□□□ 0.99
LSM4-201ENST00000252816 RAB21Q9UL25 225 aa21.23■□□□□ 0.99
LSM4-201ENST00000252816 DLGAP4Q9Y2H0 992 aa21.23■□□□□ 0.99
LSM4-201ENST00000252816 A0A0G2JMM0 328 aa21.22■□□□□ 0.99
LSM4-201ENST00000252816 A0A1W2PPB8 328 aa21.22■□□□□ 0.99
LSM4-201ENST00000252816 A0A1W2PRS3 328 aa21.22■□□□□ 0.99
LSM4-201ENST00000252816 PINLYPA6NC86 204 aa21.22■□□□□ 0.99
LSM4-201ENST00000252816 KIR3DP1A8MWS1 328 aa21.22■□□□□ 0.99
LSM4-201ENST00000252816 H3BQF6 201 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms