RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 SGTAO43765 313 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 EVI2BP34910 448 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 EVX1P49640 407 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 CAV3P56539 151 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 ALDH6A1Q02252 535 aaKnown RBP13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 SF3A2Q15428 464 aaKnown RBP13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 PRSS53Q2L4Q9 553 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 CDONQ4KMG0 1287 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 CRTC2Q53ET0 693 aaPredicted RBP13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 FAM71E1Q6IPT2 247 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 OR56A3Q8NH54 315 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 COQ7Q99807 217 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 ANAPC1Q9H1A4 1944 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 TMEM129A0AVI4 362 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 H7C4K7 107 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 MEN1O00255 615 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 HPGDSO60760 199 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 KLHL18O94889 574 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 GBAP04062 536 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 OR1D2P34982 312 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 RPL3P39023 403 aaKnown RBP13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 MAPK12P53778 367 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 ZNF782Q6ZMW2 699 aaPredicted RBP13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 TRILQ7L0X0 811 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 IQCF1Q8N6M8 205 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 NATD1Q8N6N6 113 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 ASZ1Q8WWH4 475 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 AP2M1Q96CW1 435 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 ECHDC3Q96DC8 303 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 ZNF582Q96NG8 517 aaPredicted RBP13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 SLC22A12Q96S37 553 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 DCLRE1CQ96SD1 692 aaKnown RBP13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 TM9SF2Q99805 663 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 GPBP1L1Q9HC44 474 aaPredicted RBP13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 GALNT9Q9HCQ5 603 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 MYNNQ9NPC7 610 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 MRPS18AQ9NVS2 196 aaKnown RBP13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 GSTK1Q9Y2Q3 226 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 CDH10Q9Y6N8 788 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 LRRTM2O43300 516 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 LATS1O95835 1130 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 H1F0P07305 194 aaKnown RBP13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 NR2F6P10588 404 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 UBL4AP11441 157 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 IFI30P13284 250 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 GABRA5P31644 462 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 EFNB1P98172 346 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 FABP5Q01469 135 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 C2orf80Q0P641 193 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 CRHR2Q13324 411 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 CCSMST1Q4G0I0 132 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 TOR2AQ5JU69 321 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 ZBTB37Q5TC79 503 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 OR2G6Q5TZ20 316 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 MED27Q6P2C8 311 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 UNC5DQ6UXZ4 953 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 SLCO4C1Q6ZQN7 724 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 USP45Q70EL2 814 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 OR4M2Q8NGB6 313 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 C16orf78Q8WTQ4 265 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 DNAJA4Q8WW22 397 aaPredicted RBP13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 TEFMQ96QE5 360 aaKnown RBP13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 NARFLQ9H6Q4 476 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 EIF3KQ9UBQ5 218 aaKnown RBP13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 MALT1Q9UDY8 824 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 SPEF1Q9Y4P9 236 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 DOCK6Q96HP0 2047 aa13.28□□□□□ -0.28
SCNN1A-201ENST00000228916 A0A1W2PRB8 838 aa13.27□□□□□ -0.28
SCNN1A-201ENST00000228916 MTX2O75431 263 aa13.27□□□□□ -0.28
SCNN1A-201ENST00000228916 SOAT1P35610 550 aa13.27□□□□□ -0.28
SCNN1A-201ENST00000228916 SPINT3P49223 89 aa13.27□□□□□ -0.28
SCNN1A-201ENST00000228916 FLT3LGP49771 235 aa13.27□□□□□ -0.28
SCNN1A-201ENST00000228916 RPS26P11Q5JNZ5 115 aaPredicted RBP13.27□□□□□ -0.28
SCNN1A-201ENST00000228916 ZDHHC20Q5W0Z9 365 aa13.27□□□□□ -0.28
SCNN1A-201ENST00000228916 GLRX5Q86SX6 157 aa13.27□□□□□ -0.28
SCNN1A-201ENST00000228916 OR2AP1Q8NGE2 309 aa13.27□□□□□ -0.28
SCNN1A-201ENST00000228916 AKAP1Q92667 903 aaKnown RBP eCLIP13.27□□□□□ -0.281e-6■■■■■ 35.7
SCNN1A-201ENST00000228916 FGF20Q9NP95 211 aaPredicted RBP13.27□□□□□ -0.28
SCNN1A-201ENST00000228916 MAT2BQ9NZL9 334 aa13.27□□□□□ -0.28
SCNN1A-201ENST00000228916 ACAD8Q9UKU7 415 aa13.27□□□□□ -0.28
SCNN1A-201ENST00000228916 TEX51A0A1B0GUA7 166 aa13.27□□□□□ -0.29
SCNN1A-201ENST00000228916 LINC00862A6NCI5 91 aa13.27□□□□□ -0.29
SCNN1A-201ENST00000228916 PLOD3O60568 738 aa13.27□□□□□ -0.29
SCNN1A-201ENST00000228916 GALTP07902 379 aa13.27□□□□□ -0.29
SCNN1A-201ENST00000228916 TNNI3P19429 210 aa13.27□□□□□ -0.29
SCNN1A-201ENST00000228916 POU3F3P20264 500 aaPredicted RBP13.27□□□□□ -0.29
SCNN1A-201ENST00000228916 PRKACBP22694 351 aa13.27□□□□□ -0.29
SCNN1A-201ENST00000228916 IMPA1P29218 277 aa13.27□□□□□ -0.29
SCNN1A-201ENST00000228916 DGKGP49619 791 aa13.27□□□□□ -0.29
SCNN1A-201ENST00000228916 PNLIPRP1P54315 467 aa13.27□□□□□ -0.29
SCNN1A-201ENST00000228916 PLD1Q13393 1074 aa13.27□□□□□ -0.29
SCNN1A-201ENST00000228916 NFE2L1Q14494 772 aa13.27□□□□□ -0.29
SCNN1A-201ENST00000228916 DUSP6Q16828 381 aa13.27□□□□□ -0.29
SCNN1A-201ENST00000228916 KLHL22Q53GT1 634 aa13.27□□□□□ -0.29
SCNN1A-201ENST00000228916 IFNL1Q8IU54 200 aa13.27□□□□□ -0.29
SCNN1A-201ENST00000228916 LRR1Q96L50 414 aa13.27□□□□□ -0.29
SCNN1A-201ENST00000228916 ATF6BQ99941 703 aa13.27□□□□□ -0.29
SCNN1A-201ENST00000228916 ARPC5LQ9BPX5 153 aa13.27□□□□□ -0.29
SCNN1A-201ENST00000228916 PHF11Q9UIL8 331 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms