RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 ADAM29Q9UKF5 820 aa23.36■■□□□ 1.33
VEGFA-232ENST00000640653 ARHGAP10A1A4S6 786 aa23.35■■□□□ 1.33
VEGFA-232ENST00000640653 GLOD5A6NK44 160 aa23.35■■□□□ 1.33
VEGFA-232ENST00000640653 PRRG2O14669 202 aa23.35■■□□□ 1.33
VEGFA-232ENST00000640653 HS6ST1O60243 411 aa23.35■■□□□ 1.33
VEGFA-232ENST00000640653 GBAP04062 536 aa23.35■■□□□ 1.33
VEGFA-232ENST00000640653 SBK3P0C264 359 aa23.35■■□□□ 1.33
VEGFA-232ENST00000640653 PTGER1P34995 402 aa23.35■■□□□ 1.33
VEGFA-232ENST00000640653 SMSP52788 366 aa23.35■■□□□ 1.33
VEGFA-232ENST00000640653 SPRED3Q2MJR0 410 aa23.35■■□□□ 1.33
VEGFA-232ENST00000640653 OR52E8Q6IFG1 317 aa23.35■■□□□ 1.33
VEGFA-232ENST00000640653 RPS27LQ71UM5 84 aaKnown RBP23.35■■□□□ 1.33
VEGFA-232ENST00000640653 EID3Q8N140 333 aa23.35■■□□□ 1.33
VEGFA-232ENST00000640653 TMEM151AQ8N4L1 468 aa23.35■■□□□ 1.33
VEGFA-232ENST00000640653 GOLM1Q8NBJ4 401 aa23.35■■□□□ 1.33
VEGFA-232ENST00000640653 CNPPD1Q9BV87 410 aa23.35■■□□□ 1.33
VEGFA-232ENST00000640653 FETUBQ9UGM5 382 aa23.35■■□□□ 1.33
VEGFA-232ENST00000640653 SNX6Q9UNH7 406 aa23.35■■□□□ 1.33
VEGFA-232ENST00000640653 ENTPD4Q9Y227 616 aa23.35■■□□□ 1.33
VEGFA-232ENST00000640653 KLF2Q9Y5W3 355 aaPredicted RBP23.35■■□□□ 1.33
VEGFA-232ENST00000640653 DIDO1Q9BTC0 2240 aaKnown RBP23.35■■□□□ 1.33
VEGFA-232ENST00000640653 NAV2Q8IVL1 2488 aa23.34■■□□□ 1.33
VEGFA-232ENST00000640653 GALNSP34059 522 aa23.34■■□□□ 1.33
VEGFA-232ENST00000640653 CDH13P55290 713 aa23.34■■□□□ 1.33
VEGFA-232ENST00000640653 ASPHQ12797 758 aa23.34■■□□□ 1.33
VEGFA-232ENST00000640653 SGO1Q5FBB7 561 aa23.34■■□□□ 1.33
VEGFA-232ENST00000640653 PIGGQ5H8A4 983 aa23.34■■□□□ 1.33
VEGFA-232ENST00000640653 XKRXQ6PP77 449 aa23.34■■□□□ 1.33
VEGFA-232ENST00000640653 DGAT2L6Q6ZPD8 337 aa23.34■■□□□ 1.33
VEGFA-232ENST00000640653 C9orf40Q8IXQ3 194 aa23.34■■□□□ 1.33
VEGFA-232ENST00000640653 OR2M7Q8NG81 312 aa23.34■■□□□ 1.33
VEGFA-232ENST00000640653 SLC22A8Q8TCC7 542 aa23.34■■□□□ 1.33
VEGFA-232ENST00000640653 RIT1Q92963 219 aa23.34■■□□□ 1.33
VEGFA-232ENST00000640653 DEPPQ9NTK1 212 aa23.34■■□□□ 1.33
VEGFA-232ENST00000640653 PSMC3IPQ9P2W1 217 aaPredicted RBP23.34■■□□□ 1.33
VEGFA-232ENST00000640653 MEMO1Q9Y316 297 aa23.34■■□□□ 1.33
VEGFA-232ENST00000640653 ACOT7O00154 380 aa23.33■■□□□ 1.33
VEGFA-232ENST00000640653 HRKO00198 91 aa23.33■■□□□ 1.33
VEGFA-232ENST00000640653 CDC40O60508 579 aaKnown RBP eCLIP23.33■■□□□ 1.332e-13■■□□□ 11.5
VEGFA-232ENST00000640653 KLK1P06870 262 aa23.33■■□□□ 1.33
VEGFA-232ENST00000640653 FAM153BP0C7A2 387 aa23.33■■□□□ 1.33
VEGFA-232ENST00000640653 SLC35E2P0CK97 266 aa23.33■■□□□ 1.33
VEGFA-232ENST00000640653 HERVK_113P63132 956 aa23.33■■□□□ 1.33
VEGFA-232ENST00000640653 ERVK-8P63133 956 aa23.33■■□□□ 1.33
VEGFA-232ENST00000640653 PLGLB1Q02325 96 aa23.33■■□□□ 1.33
VEGFA-232ENST00000640653 SLC29A2Q14542 456 aa23.33■■□□□ 1.33
VEGFA-232ENST00000640653 ZNF267Q14586 743 aaPredicted RBP23.33■■□□□ 1.33
VEGFA-232ENST00000640653 ZNF750Q32MQ0 723 aa23.33■■□□□ 1.33
VEGFA-232ENST00000640653 FAM153CQ494X1 144 aa23.33■■□□□ 1.33
VEGFA-232ENST00000640653 CMPK2Q5EBM0 449 aa23.33■■□□□ 1.33
VEGFA-232ENST00000640653 LETMD1Q6P1Q0 360 aa23.33■■□□□ 1.33
VEGFA-232ENST00000640653 RNF111Q6ZNA4 994 aa23.33■■□□□ 1.33
VEGFA-232ENST00000640653 GK5Q6ZS86 529 aa23.33■■□□□ 1.33
VEGFA-232ENST00000640653 SLC29A4Q7RTT9 530 aa23.33■■□□□ 1.33
VEGFA-232ENST00000640653 CHERPQ8IWX8 916 aaKnown RBP23.33■■□□□ 1.33
VEGFA-232ENST00000640653 ACMSDQ8TDX5 336 aa23.33■■□□□ 1.33
VEGFA-232ENST00000640653 AGAP11Q8TF27 550 aa23.33■■□□□ 1.33
VEGFA-232ENST00000640653 SELENOMQ8WWX9 145 aa23.33■■□□□ 1.33
VEGFA-232ENST00000640653 ERVK-6Q9BXR3 956 aa23.33■■□□□ 1.33
VEGFA-232ENST00000640653 MRPL1Q9BYD6 325 aaKnown RBP23.33■■□□□ 1.33
VEGFA-232ENST00000640653 SACM1LQ9NTJ5 587 aa23.33■■□□□ 1.33
VEGFA-232ENST00000640653 RYDENQ9NUL5 291 aaKnown RBP23.33■■□□□ 1.33
VEGFA-232ENST00000640653 TMEM216Q9P0N5 145 aa23.33■■□□□ 1.33
VEGFA-232ENST00000640653 TRPS1Q9UHF7 1281 aa23.33■■□□□ 1.33
VEGFA-232ENST00000640653 SLC12A4Q9UP95 1085 aa23.33■■□□□ 1.33
VEGFA-232ENST00000640653 ERVK-19Q9WJR5 959 aa23.33■■□□□ 1.33
VEGFA-232ENST00000640653 TSPAN8P19075 237 aa23.32■■□□□ 1.32
VEGFA-232ENST00000640653 AGAP20933 346 aa23.32■■□□□ 1.32
VEGFA-232ENST00000640653 CNR1P21554 472 aa23.32■■□□□ 1.32
VEGFA-232ENST00000640653 PIK3R1P27986 724 aa23.32■■□□□ 1.32
VEGFA-232ENST00000640653 PTGS2P35354 604 aa23.32■■□□□ 1.32
VEGFA-232ENST00000640653 ADORA2A-AS1P86434 159 aa23.32■■□□□ 1.32
VEGFA-232ENST00000640653 CLCQ05315 142 aa23.32■■□□□ 1.32
VEGFA-232ENST00000640653 CCNYL2Q5T2Q4 361 aa23.32■■□□□ 1.32
VEGFA-232ENST00000640653 SP5Q6BEB4 398 aaPredicted RBP23.32■■□□□ 1.32
VEGFA-232ENST00000640653 RGS9BPQ6ZS82 235 aa23.32■■□□□ 1.32
VEGFA-232ENST00000640653 METTL4Q8N3J2 472 aa23.32■■□□□ 1.32
VEGFA-232ENST00000640653 SLC15A4Q8N697 577 aa23.32■■□□□ 1.32
VEGFA-232ENST00000640653 TRPC4APQ8TEL6 797 aa23.32■■□□□ 1.32
VEGFA-232ENST00000640653 FAM173AQ9BQD7 235 aa23.32■■□□□ 1.32
VEGFA-232ENST00000640653 TXLNGYQ9BZA5 131 aa23.32■■□□□ 1.32
VEGFA-232ENST00000640653 BRF2Q9HAW0 419 aa23.32■■□□□ 1.32
VEGFA-232ENST00000640653 NMRK1Q9NWW6 199 aa23.32■■□□□ 1.32
VEGFA-232ENST00000640653 TEX10Q9NXF1 929 aaPredicted RBP23.32■■□□□ 1.32
VEGFA-232ENST00000640653 A0A1B0GTH9 108 aa23.31■■□□□ 1.32
VEGFA-232ENST00000640653 A0A1B0GTL3 188 aa23.31■■□□□ 1.32
VEGFA-232ENST00000640653 OR6C76A6NM76 312 aa23.31■■□□□ 1.32
VEGFA-232ENST00000640653 WASHC1A8K0Z3 465 aa23.31■■□□□ 1.32
VEGFA-232ENST00000640653 PPP6CO00743 305 aa23.31■■□□□ 1.32
VEGFA-232ENST00000640653 PGRMC2O15173 223 aa23.31■■□□□ 1.32
VEGFA-232ENST00000640653 ZNHIT1O43257 154 aa23.31■■□□□ 1.32
VEGFA-232ENST00000640653 HNRNPRO43390 633 aaKnown RBP23.31■■□□□ 1.32
VEGFA-232ENST00000640653 ZNF354AO60765 605 aaPredicted RBP23.31■■□□□ 1.32
VEGFA-232ENST00000640653 GUCY1B2O75343 617 aa23.31■■□□□ 1.32
VEGFA-232ENST00000640653 SUPT7LO94864 414 aa23.31■■□□□ 1.32
VEGFA-232ENST00000640653 PDYNP01213 254 aa23.31■■□□□ 1.32
VEGFA-232ENST00000640653 P04436 131 aa23.31■■□□□ 1.32
VEGFA-232ENST00000640653 HSD17B3P37058 310 aa23.31■■□□□ 1.32
VEGFA-232ENST00000640653 PPIAP62937 165 aaKnown RBP23.31■■□□□ 1.32
VEGFA-232ENST00000640653 NDUFAF5Q5TEU4 345 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms