RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 FRA10AC1Q70Z53 315 aa18.46■□□□□ 0.55
TARDBP-228ENST00000629725 CXXC5Q7LFL8 322 aaKnown RBP18.46■□□□□ 0.55
TARDBP-228ENST00000629725 CIARTQ8N365 385 aaPredicted RBP18.46■□□□□ 0.55
TARDBP-228ENST00000629725 NKAPQ8N5F7 415 aaKnown RBP18.46■□□□□ 0.55
TARDBP-228ENST00000629725 RHBDF1Q96CC6 855 aa18.46■□□□□ 0.55
TARDBP-228ENST00000629725 ZNF597Q96LX8 424 aa18.46■□□□□ 0.55
TARDBP-228ENST00000629725 TRIB1Q96RU8 372 aa18.46■□□□□ 0.55
TARDBP-228ENST00000629725 WDR83Q9BRX9 315 aaKnown RBP18.46■□□□□ 0.55
TARDBP-228ENST00000629725 ROGDIQ9GZN7 287 aa18.46■□□□□ 0.55
TARDBP-228ENST00000629725 GPRC5BQ9NZH0 403 aa18.46■□□□□ 0.55
TARDBP-228ENST00000629725 CNOT11Q9UKZ1 510 aaKnown RBP18.46■□□□□ 0.55
TARDBP-228ENST00000629725 CAMK2AQ9UQM7 478 aa18.46■□□□□ 0.55
TARDBP-228ENST00000629725 HIVEP2P31629 2446 aa18.46■□□□□ 0.55
TARDBP-228ENST00000629725 MBD3L4A6NDZ8 208 aaPredicted RBP18.45■□□□□ 0.54
TARDBP-228ENST00000629725 MBD3L3A6NE82 208 aaPredicted RBP18.45■□□□□ 0.54
TARDBP-228ENST00000629725 MBD3L5A6NJ08 208 aaPredicted RBP18.45■□□□□ 0.54
TARDBP-228ENST00000629725 CD8B2A6NJW9 211 aa18.45■□□□□ 0.54
TARDBP-228ENST00000629725 H7C1Q1 480 aa18.45■□□□□ 0.54
TARDBP-228ENST00000629725 BANF1O75531 89 aa18.45■□□□□ 0.54
TARDBP-228ENST00000629725 ZNF793Q6ZN11 406 aa18.45■□□□□ 0.54
TARDBP-228ENST00000629725 OR4N5Q8IXE1 308 aa18.45■□□□□ 0.54
TARDBP-228ENST00000629725 ACOT4Q8N9L9 421 aa18.45■□□□□ 0.54
TARDBP-228ENST00000629725 SIMC1Q8NDZ2 872 aa18.45■□□□□ 0.54
TARDBP-228ENST00000629725 SRFBP1Q8NEF9 429 aaKnown RBP18.45■□□□□ 0.54
TARDBP-228ENST00000629725 MBD3L2Q8NHZ7 208 aaPredicted RBP18.45■□□□□ 0.54
TARDBP-228ENST00000629725 SMPDL3BQ92485 455 aa18.45■□□□□ 0.54
TARDBP-228ENST00000629725 PPWD1Q96BP3 646 aaKnown RBP18.45■□□□□ 0.54
TARDBP-228ENST00000629725 RBM18Q96H35 190 aaKnown RBP18.45■□□□□ 0.54
TARDBP-228ENST00000629725 ART5Q96L15 291 aa18.45■□□□□ 0.54
TARDBP-228ENST00000629725 NAT9Q9BTE0 207 aa18.45■□□□□ 0.54
TARDBP-228ENST00000629725 EHD1Q9H4M9 534 aa18.45■□□□□ 0.54
TARDBP-228ENST00000629725 LZTFL1Q9NQ48 299 aa18.45■□□□□ 0.54
TARDBP-228ENST00000629725 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.45■□□□□ 0.54
TARDBP-228ENST00000629725 ZNF490Q9ULM2 529 aaPredicted RBP18.45■□□□□ 0.54
TARDBP-228ENST00000629725 HRKO00198 91 aa18.44■□□□□ 0.54
TARDBP-228ENST00000629725 CES2O00748 559 aa18.44■□□□□ 0.54
TARDBP-228ENST00000629725 FGF17O60258 216 aa18.44■□□□□ 0.54
TARDBP-228ENST00000629725 TRIM3O75382 744 aaPredicted RBP18.44■□□□□ 0.54
TARDBP-228ENST00000629725 IL18BPO95998 194 aa18.44■□□□□ 0.54
TARDBP-228ENST00000629725 CDC25BP30305 580 aa18.44■□□□□ 0.54
TARDBP-228ENST00000629725 NTRK2Q16620 822 aa18.44■□□□□ 0.54
TARDBP-228ENST00000629725 TBCELQ5QJ74 424 aa18.44■□□□□ 0.54
TARDBP-228ENST00000629725 VASNQ6EMK4 673 aa18.44■□□□□ 0.54
TARDBP-228ENST00000629725 SLC29A4Q7RTT9 530 aa18.44■□□□□ 0.54
TARDBP-228ENST00000629725 ADAMTSL2Q86TH1 951 aa18.44■□□□□ 0.54
TARDBP-228ENST00000629725 LRRC75A-AS1Q8N1F1 130 aa18.44■□□□□ 0.54
TARDBP-228ENST00000629725 ZNF592Q92610 1267 aa18.44■□□□□ 0.54
TARDBP-228ENST00000629725 DIO2Q92813 273 aa18.44■□□□□ 0.54
TARDBP-228ENST00000629725 ISL2Q96A47 359 aa18.44■□□□□ 0.54
TARDBP-228ENST00000629725 FBXL20Q96IG2 436 aa18.44■□□□□ 0.54
TARDBP-228ENST00000629725 GAL3ST4Q96RP7 486 aa18.44■□□□□ 0.54
TARDBP-228ENST00000629725 TBCDQ9BTW9 1192 aa18.44■□□□□ 0.54
TARDBP-228ENST00000629725 RBM24Q9BX46 236 aaKnown RBP18.44■□□□□ 0.54
TARDBP-228ENST00000629725 RYDENQ9NUL5 291 aaKnown RBP18.44■□□□□ 0.54
TARDBP-228ENST00000629725 ATRQ13535 2644 aa18.44■□□□□ 0.54
TARDBP-228ENST00000629725 SH3D21A4FU49 640 aa18.43■□□□□ 0.54
TARDBP-228ENST00000629725 ANKRD33BA6NCL7 494 aa18.43■□□□□ 0.54
TARDBP-228ENST00000629725 NCF1BA6NI72 391 aaPredicted RBP18.43■□□□□ 0.54
TARDBP-228ENST00000629725 NCF1CA8MVU1 366 aaPredicted RBP18.43■□□□□ 0.54
TARDBP-228ENST00000629725 CLGNO14967 610 aa18.43■□□□□ 0.54
TARDBP-228ENST00000629725 SMPD2O60906 423 aa18.43■□□□□ 0.54
TARDBP-228ENST00000629725 ERN1O75460 977 aaKnown RBP18.43■□□□□ 0.54
TARDBP-228ENST00000629725 ACSL3O95573 720 aa18.43■□□□□ 0.54
TARDBP-228ENST00000629725 NCF1P14598 390 aaPredicted RBP18.43■□□□□ 0.54
TARDBP-228ENST00000629725 CPN2P22792 545 aa18.43■□□□□ 0.54
TARDBP-228ENST00000629725 ATP5A1P25705 553 aaKnown RBP18.43■□□□□ 0.54
TARDBP-228ENST00000629725 RPL21P46778 160 aaKnown RBP18.43■□□□□ 0.54
TARDBP-228ENST00000629725 IGLV3-21P80748 117 aaPredicted RBP18.43■□□□□ 0.54
TARDBP-228ENST00000629725 PPP2R2BQ00005 443 aa18.43■□□□□ 0.54
TARDBP-228ENST00000629725 BIKQ13323 160 aa18.43■□□□□ 0.54
TARDBP-228ENST00000629725 TSNQ15631 228 aaKnown RBP18.43■□□□□ 0.54
TARDBP-228ENST00000629725 NHSL2Q5HYW2 709 aa18.43■□□□□ 0.54
TARDBP-228ENST00000629725 RNASEH2BQ5TBB1 312 aaKnown RBP18.43■□□□□ 0.54
TARDBP-228ENST00000629725 DGAT2L6Q6ZPD8 337 aa18.43■□□□□ 0.54
TARDBP-228ENST00000629725 CAPN12Q6ZSI9 719 aa18.43■□□□□ 0.54
TARDBP-228ENST00000629725 SYDE1Q6ZW31 735 aaPredicted RBP18.43■□□□□ 0.54
TARDBP-228ENST00000629725 UBE3DQ7Z6J8 389 aa18.43■□□□□ 0.54
TARDBP-228ENST00000629725 PTCD3Q96EY7 689 aaKnown RBP18.43■□□□□ 0.54
TARDBP-228ENST00000629725 Q96MF0 132 aa18.43■□□□□ 0.54
TARDBP-228ENST00000629725 BDH2Q9BUT1 245 aa18.43■□□□□ 0.54
TARDBP-228ENST00000629725 CALHM2Q9HA72 323 aa18.43■□□□□ 0.54
TARDBP-228ENST00000629725 CTNNAL1Q9UBT7 734 aa18.43■□□□□ 0.54
TARDBP-228ENST00000629725 SLC6A5Q9Y345 797 aa18.43■□□□□ 0.54
TARDBP-228ENST00000629725 IKBKGQ9Y6K9 419 aa18.43■□□□□ 0.54
TARDBP-228ENST00000629725 IQANK1A0A1B0GTG1 560 aa18.42■□□□□ 0.54
TARDBP-228ENST00000629725 RTCAO00442 366 aaKnown RBP18.42■□□□□ 0.54
TARDBP-228ENST00000629725 CASKO14936 926 aa18.42■□□□□ 0.54
TARDBP-228ENST00000629725 SMAD7O15105 426 aaKnown RBP18.42■□□□□ 0.54
TARDBP-228ENST00000629725 HPNP05981 417 aa18.42■□□□□ 0.54
TARDBP-228ENST00000629725 HIST1H1TP22492 207 aaPredicted RBP18.42■□□□□ 0.54
TARDBP-228ENST00000629725 CDK9P50750 372 aaKnown RBP18.42■□□□□ 0.54
TARDBP-228ENST00000629725 PLIN5Q00G26 463 aa18.42■□□□□ 0.54
TARDBP-228ENST00000629725 ZNF460Q14592 562 aa18.42■□□□□ 0.54
TARDBP-228ENST00000629725 MSS51Q4VC12 460 aa18.42■□□□□ 0.54
TARDBP-228ENST00000629725 IGDCC3Q8IVU1 814 aa18.42■□□□□ 0.54
TARDBP-228ENST00000629725 BBOF1Q8ND07 529 aa18.42■□□□□ 0.54
TARDBP-228ENST00000629725 TRIM58Q8NG06 486 aa18.42■□□□□ 0.54
TARDBP-228ENST00000629725 PIGTQ969N2 578 aa18.42■□□□□ 0.54
TARDBP-228ENST00000629725 PIP5K1AQ99755 562 aa18.42■□□□□ 0.54
TARDBP-228ENST00000629725 WWTR1Q9GZV5 400 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms