RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 NATD1Q8N6N6 113 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 C19orf47Q8N9M1 422 aaKnown RBP8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 FAM47BQ8NA70 645 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 OR10A6Q8NH74 314 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 UTP15Q8TED0 518 aaKnown RBP8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 ZNF764Q96H86 408 aaPredicted RBP8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 RSRC1Q96IZ7 334 aaKnown RBP8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 MAP3K3Q99759 626 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 FAIM2Q9BWQ8 316 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 CHST8Q9H2A9 424 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 C1GALT1Q9NS00 363 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 GPATCH2Q9NW75 528 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 ACTR3BQ9P1U1 418 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 LRIT1Q9P2V4 623 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 ATG4BQ9Y4P1 393 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 SNX13Q9Y5W8 968 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 A0A1W2PR48 441 aa8.97□□□□□ -0.97
PDLIM5-223ENST00000627587 ZSCAN9O15535 394 aaPredicted RBP8.97□□□□□ -0.97
PDLIM5-223ENST00000627587 ZCCHC18P0CG32 403 aa8.97□□□□□ -0.97
PDLIM5-223ENST00000627587 ZNF888P0CJ79 500 aaPredicted RBP8.97□□□□□ -0.97
PDLIM5-223ENST00000627587 SFTPCP11686 197 aa8.97□□□□□ -0.97
PDLIM5-223ENST00000627587 DRD2P14416 443 aa8.97□□□□□ -0.97
PDLIM5-223ENST00000627587 GLB1P16278 677 aa8.97□□□□□ -0.97
PDLIM5-223ENST00000627587 ZNF10P21506 573 aaPredicted RBP8.97□□□□□ -0.97
PDLIM5-223ENST00000627587 ALDH4A1P30038 563 aa8.97□□□□□ -0.97
PDLIM5-223ENST00000627587 GABRA4P48169 554 aa8.97□□□□□ -0.97
PDLIM5-223ENST00000627587 SLC34A1Q06495 639 aa8.97□□□□□ -0.97
PDLIM5-223ENST00000627587 SLAMF1Q13291 335 aa8.97□□□□□ -0.97
PDLIM5-223ENST00000627587 NR1D2Q14995 579 aa8.97□□□□□ -0.97
PDLIM5-223ENST00000627587 MANEAQ5SRI9 462 aa8.97□□□□□ -0.97
PDLIM5-223ENST00000627587 NDUFAF5Q5TEU4 345 aa8.97□□□□□ -0.97
PDLIM5-223ENST00000627587 NKAIN2Q5VXU1 208 aa8.97□□□□□ -0.97
PDLIM5-223ENST00000627587 GUSBP11Q6P575 273 aa8.97□□□□□ -0.97
PDLIM5-223ENST00000627587 ABHD13Q7L211 337 aa8.97□□□□□ -0.97
PDLIM5-223ENST00000627587 PRSS41Q7RTY9 318 aa8.97□□□□□ -0.97
PDLIM5-223ENST00000627587 LILRA2Q8N149 483 aa8.97□□□□□ -0.97
PDLIM5-223ENST00000627587 TNIP2Q8NFZ5 429 aa8.97□□□□□ -0.97
PDLIM5-223ENST00000627587 OR2T12Q8NG77 320 aa8.97□□□□□ -0.97
PDLIM5-223ENST00000627587 OR4A15Q8NGL6 344 aa8.97□□□□□ -0.97
PDLIM5-223ENST00000627587 DUS3LQ96G46 650 aaKnown RBP8.97□□□□□ -0.97
PDLIM5-223ENST00000627587 AHCYL2Q96HN2 611 aaKnown RBP8.97□□□□□ -0.97
PDLIM5-223ENST00000627587 CCDC3Q9BQI4 270 aa8.97□□□□□ -0.97
PDLIM5-223ENST00000627587 STRADBQ9C0K7 418 aa8.97□□□□□ -0.97
PDLIM5-223ENST00000627587 ROGDIQ9GZN7 287 aa8.97□□□□□ -0.97
PDLIM5-223ENST00000627587 RPF2Q9H7B2 306 aaKnown RBP8.97□□□□□ -0.97
PDLIM5-223ENST00000627587 STOML1Q9UBI4 398 aa8.97□□□□□ -0.97
PDLIM5-223ENST00000627587 ZNF282Q9UDV7 671 aaPredicted RBP8.97□□□□□ -0.97
PDLIM5-223ENST00000627587 PADI4Q9UM07 663 aa8.97□□□□□ -0.97
PDLIM5-223ENST00000627587 VPS4AQ9UN37 437 aa8.97□□□□□ -0.97
PDLIM5-223ENST00000627587 PCDHB3Q9Y5E6 796 aa8.97□□□□□ -0.97
PDLIM5-223ENST00000627587 COL6A6A6NMZ7 2263 aa8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 FER1L5A0AVI2 2057 aa8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 IGHV5-51A0A0C4DH38 117 aa8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 A0A1W2PRB8 838 aa8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 A0A1W2PS29 197 aa8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 SLC9B1P1A6NJY1 282 aa8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 AQP12BA6NM10 295 aa8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 CLIC1O00299 241 aa8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 PDPK1O15530 556 aa8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 B4GAT1O43505 415 aa8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 GMNNO75496 209 aa8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 TNFSF15O95150 251 aa8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 MED26O95402 600 aa8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 BAG2O95816 211 aa8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 C6orf47O95873 294 aa8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 C9P02748 559 aa8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 EIF2S1P05198 315 aaKnown RBP8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 ABCB1P08183 1280 aaPredicted RBP8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 GPX2P18283 190 aa8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 PPIBP23284 216 aaKnown RBP8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 GCKP35557 465 aa8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 PTDSS1P48651 473 aaKnown RBP8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 SESN3P58005 492 aa8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 BTN3A2P78410 334 aa8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 DUSP2Q05923 314 aa8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 SPIDRQ14159 915 aa8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 C16orf72Q14CZ0 275 aa8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 ADRM1Q16186 407 aa8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 DEFB110Q30KQ9 67 aa8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 ZC3H12BQ5HYM0 836 aaKnown RBP8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 C18orf63Q68DL7 685 aa8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 TMEM214Q6NUQ4 689 aaKnown RBP8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 FAM92BQ6ZTR7 304 aa8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 PDSS2Q86YH6 399 aa8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 SPPL2CQ8IUH8 684 aa8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 AQP12AQ8IXF9 295 aa8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 TRIML2Q8N7C3 387 aa8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 ZFP90Q8TF47 636 aa8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 FAM120BQ96EK7 910 aaKnown RBP8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 ZDHHC12Q96GR4 267 aa8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 LIN37Q96GY3 246 aaPredicted RBP8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 CCNL2Q96S94 520 aaPredicted RBP8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 NLNQ9BYT8 704 aa8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 RAB33BQ9H082 229 aa8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 EPB41L1Q9H4G0 881 aa8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 LYARQ9NX58 379 aaKnown RBP8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 TAS2R7Q9NYW3 318 aa8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 EHD3Q9NZN3 535 aa8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 KCMF1Q9P0J7 381 aa8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 EPHA6Q9UF33 1036 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms