RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 DUSP12Q9UNI6 340 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 PCDHGA3Q9Y5H0 932 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 KLK4Q9Y5K2 254 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 GPC6Q9Y625 555 aaPredicted RBP8.94□□□□□ -0.98
PDPN-212ENST00000621990 PRAMEF27A3QJZ7 478 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 METTL15A6NJ78 407 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 FAAHO00519 579 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 MID1O15344 667 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 OR1F1O43749 312 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 LCMT2O60294 686 aaKnown RBP8.94□□□□□ -0.98
PDPN-212ENST00000621990 RPLP0P05388 317 aaKnown RBP8.94□□□□□ -0.98
PDPN-212ENST00000621990 OSMP13725 252 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 POU2F1P14859 743 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 PKLRP30613 574 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 CCT3P49368 545 aaKnown RBP8.94□□□□□ -0.98
PDPN-212ENST00000621990 RGS6P49758 472 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 HSPB3Q12988 150 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 RUNX3Q13761 415 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 FGL2Q14314 439 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 IRF4Q15306 451 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 SEC23BQ15437 767 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 C2orf27AQ580R0 203 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 RAB42Q8N4Z0 105 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 FAM46DQ8NEK8 389 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 OR2L8Q8NGY9 312 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 SNRNP27Q8WVK2 155 aaKnown RBP8.94□□□□□ -0.98
PDPN-212ENST00000621990 FAM131CQ96AQ9 280 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 AMDHD1Q96NU7 426 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 INSM2Q96T92 566 aaPredicted RBP8.94□□□□□ -0.98
PDPN-212ENST00000621990 TREX2Q9BQ50 279 aaPredicted RBP8.94□□□□□ -0.98
PDPN-212ENST00000621990 SARGQ9BW04 601 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 RAB11FIP5Q9BXF6 653 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 WBP1LQ9NX94 342 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 CCDC59Q9P031 241 aaKnown RBP8.94□□□□□ -0.98
PDPN-212ENST00000621990 MGAT4BQ9UQ53 548 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 PRICKLE3O43900 615 aaPredicted RBP8.93□□□□□ -0.98
PDPN-212ENST00000621990 ADH1BP00325 375 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 ADRA2AP08913 450 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 PORP16435 677 aaPredicted RBP8.93□□□□□ -0.98
PDPN-212ENST00000621990 C5AR1P21730 350 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 TGM1P22735 817 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 CD40LGP29965 261 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 GRK5P34947 590 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 CNR2P34972 360 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 RELAQ04206 551 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 ZNF404Q494X3 552 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 SLX4IPQ5VYV7 408 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 C12orf73Q69YU5 71 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 TANGO2Q6ICL3 276 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 TUBA3EQ6PEY2 450 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 TMEM64Q6YI46 380 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 SLC44A2Q8IWA5 706 aaPredicted RBP8.93□□□□□ -0.98
PDPN-212ENST00000621990 TAGAPQ8N103 731 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 STX19Q8N4C7 294 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 TBC1D19Q8N5T2 526 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 AMER3Q8N944 861 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 EXOSC8Q96B26 276 aaKnown RBP8.93□□□□□ -0.98
PDPN-212ENST00000621990 ZNF607Q96SK3 696 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 UCK2Q9BZX2 261 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 RMI1Q9H9A7 625 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 ZDHHC4Q9NPG8 344 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 C5AR2Q9P296 337 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 P2RX2Q9UBL9 471 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 SERGEFQ9UGK8 458 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 SLC17A4Q9Y2C5 497 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 OR1A2Q9Y585 309 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 SNX11Q9Y5W9 270 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 STON1Q9Y6Q2 735 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 A0A1W2PRQ8 180 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 ANHXE9PGG2 379 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 FAM227AF5H4B4 570 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 M0R129 80 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 MAN2B1O00754 1011 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 KCNJ13O60928 360 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 CLK1P49759 484 aaKnown RBP8.93□□□□□ -0.98
PDPN-212ENST00000621990 PPP5CP53041 499 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 HYAL2Q12891 473 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 TRIM16LQ309B1 348 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 NDUFAF5Q5TEU4 345 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 RNLSQ5VYX0 342 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 PLAG1Q6DJT9 500 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 CD300LDQ6UXZ3 194 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.93□□□□□ -0.98
PDPN-212ENST00000621990 ZNF793Q6ZN11 406 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 IL17RCQ8NAC3 791 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 OR4D11Q8NGI4 311 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 MCFD2Q8NI22 146 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 RAB8BQ92930 207 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 CAMK1GQ96NX5 476 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 NEURL2Q9BR09 285 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 DPH7Q9BTV6 452 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 TAPBPLQ9BX59 468 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 BTBD1Q9H0C5 482 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 GLIPR2Q9H4G4 154 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 BCL2L10Q9HD36 194 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 CLN6Q9NWW5 311 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 TMCC3Q9ULS5 477 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 ZFR2Q9UPR6 939 aaKnown RBP8.93□□□□□ -0.98
PDPN-212ENST00000621990 IFT52Q9Y366 437 aa8.93□□□□□ -0.98
PDPN-212ENST00000621990 DOCK9Q9BZ29 2069 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms