RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 CES1P1Q9UKY3 287 aa17.37■□□□□ 0.37
CIRBP-245ENST00000621399 C17orf105B2RV13 164 aa17.36■□□□□ 0.37
CIRBP-245ENST00000621399 OR10H2O60403 315 aa17.36■□□□□ 0.37
CIRBP-245ENST00000621399 KLHL41O60662 606 aa17.36■□□□□ 0.37
CIRBP-245ENST00000621399 SLC35E2P0CK97 266 aa17.36■□□□□ 0.37
CIRBP-245ENST00000621399 SFTPCP11686 197 aa17.36■□□□□ 0.37
CIRBP-245ENST00000621399 SDC1P18827 310 aa17.36■□□□□ 0.37
CIRBP-245ENST00000621399 XKP51811 444 aa17.36■□□□□ 0.37
CIRBP-245ENST00000621399 PLIN5Q00G26 463 aa17.36■□□□□ 0.37
CIRBP-245ENST00000621399 JMJD6Q6NYC1 403 aaPredicted RBP17.36■□□□□ 0.37
CIRBP-245ENST00000621399 IKBIPQ70UQ0 350 aa17.36■□□□□ 0.37
CIRBP-245ENST00000621399 WDR75Q8IWA0 830 aaKnown RBP17.36■□□□□ 0.37
CIRBP-245ENST00000621399 ST13P4Q8IZP2 240 aaPredicted RBP17.36■□□□□ 0.37
CIRBP-245ENST00000621399 NFAM1Q8NET5 270 aaPredicted RBP17.36■□□□□ 0.37
CIRBP-245ENST00000621399 OR14A16Q8NHC5 309 aa17.36■□□□□ 0.37
CIRBP-245ENST00000621399 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.36■□□□□ 0.37
CIRBP-245ENST00000621399 PIWIL2Q8TC59 973 aaKnown RBP17.36■□□□□ 0.37
CIRBP-245ENST00000621399 PTPMT1Q8WUK0 201 aaPredicted RBP17.36■□□□□ 0.37
CIRBP-245ENST00000621399 DAZLQ92904 295 aaKnown RBP17.36■□□□□ 0.37
CIRBP-245ENST00000621399 KLHL29Q96CT2 875 aa17.36■□□□□ 0.37
CIRBP-245ENST00000621399 PELOQ9BRX2 385 aaKnown RBP17.36■□□□□ 0.37
CIRBP-245ENST00000621399 C1orf50Q9BV19 199 aa17.36■□□□□ 0.37
CIRBP-245ENST00000621399 NUDT9Q9BW91 350 aa17.36■□□□□ 0.37
CIRBP-245ENST00000621399 AKTIPQ9H8T0 292 aa17.36■□□□□ 0.37
CIRBP-245ENST00000621399 MEAF6Q9HAF1 191 aa17.36■□□□□ 0.37
CIRBP-245ENST00000621399 MMP25Q9NPA2 562 aa17.36■□□□□ 0.37
CIRBP-245ENST00000621399 SLCO1B3Q9NPD5 702 aa17.36■□□□□ 0.37
CIRBP-245ENST00000621399 BAIAP2L1Q9UHR4 511 aa17.36■□□□□ 0.37
CIRBP-245ENST00000621399 UTS2RQ9UKP6 389 aa17.36■□□□□ 0.37
CIRBP-245ENST00000621399 PCDHGA9Q9Y5G4 932 aaKnown RBP17.36■□□□□ 0.37
CIRBP-245ENST00000621399 ZNF780BQ9Y6R6 833 aa17.36■□□□□ 0.37
CIRBP-245ENST00000621399 ATMQ13315 3056 aa17.35■□□□□ 0.37
CIRBP-245ENST00000621399 TRPC5OSA6NMA1 111 aa17.35■□□□□ 0.37
CIRBP-245ENST00000621399 DYRK3O43781 588 aa17.35■□□□□ 0.37
CIRBP-245ENST00000621399 VPS4BO75351 444 aa17.35■□□□□ 0.37
CIRBP-245ENST00000621399 ITGAMP11215 1152 aa17.35■□□□□ 0.37
CIRBP-245ENST00000621399 BCKDHAP12694 445 aa17.35■□□□□ 0.37
CIRBP-245ENST00000621399 DDCP20711 480 aa17.35■□□□□ 0.37
CIRBP-245ENST00000621399 MAD2L1Q13257 205 aaPredicted RBP17.35■□□□□ 0.37
CIRBP-245ENST00000621399 LY6DQ14210 128 aa17.35■□□□□ 0.37
CIRBP-245ENST00000621399 ZNF750Q32MQ0 723 aa17.35■□□□□ 0.37
CIRBP-245ENST00000621399 AGAP7PQ5VUJ5 663 aa17.35■□□□□ 0.37
CIRBP-245ENST00000621399 IL23RQ5VWK5 629 aa17.35■□□□□ 0.37
CIRBP-245ENST00000621399 FAM71E1Q6IPT2 247 aa17.35■□□□□ 0.37
CIRBP-245ENST00000621399 B3GNT7Q8NFL0 401 aa17.35■□□□□ 0.37
CIRBP-245ENST00000621399 C9orf43Q8TAL5 461 aaPredicted RBP17.35■□□□□ 0.37
CIRBP-245ENST00000621399 BRIX1Q8TDN6 353 aaKnown RBP17.35■□□□□ 0.37
CIRBP-245ENST00000621399 EXOSC8Q96B26 276 aaKnown RBP17.35■□□□□ 0.37
CIRBP-245ENST00000621399 EGLN2Q96KS0 407 aa17.35■□□□□ 0.37
CIRBP-245ENST00000621399 AGAP4Q96P64 663 aa17.35■□□□□ 0.37
CIRBP-245ENST00000621399 TSSK3Q96PN8 268 aa17.35■□□□□ 0.37
CIRBP-245ENST00000621399 KCNK13Q9HB14 408 aa17.35■□□□□ 0.37
CIRBP-245ENST00000621399 MIEF1Q9NQG6 463 aa17.35■□□□□ 0.37
CIRBP-245ENST00000621399 EIF3LQ9Y262 564 aaKnown RBP17.35■□□□□ 0.37
CIRBP-245ENST00000621399 PIEZO2Q9H5I5 2752 aa17.34■□□□□ 0.37
CIRBP-245ENST00000621399 A0A1W2PS29 197 aa17.34■□□□□ 0.37
CIRBP-245ENST00000621399 A8MUI8 341 aa17.34■□□□□ 0.37
CIRBP-245ENST00000621399 ATXN7O15265 892 aaPredicted RBP17.34■□□□□ 0.37
CIRBP-245ENST00000621399 ALPPP05187 535 aa17.34■□□□□ 0.37
CIRBP-245ENST00000621399 CPMP14384 443 aa17.34■□□□□ 0.37
CIRBP-245ENST00000621399 PORP16435 677 aaPredicted RBP17.34■□□□□ 0.37
CIRBP-245ENST00000621399 CSNK2A2P19784 350 aaPredicted RBP17.34■□□□□ 0.37
CIRBP-245ENST00000621399 FEN1P39748 380 aaKnown RBP17.34■□□□□ 0.37
CIRBP-245ENST00000621399 PGDP52209 483 aa17.34■□□□□ 0.37
CIRBP-245ENST00000621399 EMX2Q04743 252 aa17.34■□□□□ 0.37
CIRBP-245ENST00000621399 SMU1Q2TAY7 513 aa17.34■□□□□ 0.37
CIRBP-245ENST00000621399 IGSF10Q6WRI0 2623 aa17.34■□□□□ 0.37
CIRBP-245ENST00000621399 DGAT2L6Q6ZPD8 337 aa17.34■□□□□ 0.37
CIRBP-245ENST00000621399 FAM47EQ6ZV65 393 aa17.34■□□□□ 0.37
CIRBP-245ENST00000621399 TICAM1Q8IUC6 712 aa17.34■□□□□ 0.37
CIRBP-245ENST00000621399 LIX1Q8N485 282 aa17.34■□□□□ 0.37
CIRBP-245ENST00000621399 SIRT6Q8N6T7 355 aa17.34■□□□□ 0.37
CIRBP-245ENST00000621399 MORN4Q8NDC4 146 aa17.34■□□□□ 0.37
CIRBP-245ENST00000621399 CLHC1Q8NHS4 586 aa17.34■□□□□ 0.37
CIRBP-245ENST00000621399 RIT1Q92963 219 aa17.34■□□□□ 0.37
CIRBP-245ENST00000621399 GFM2Q969S9 779 aaKnown RBP17.34■□□□□ 0.37
CIRBP-245ENST00000621399 SCN2AQ99250 2005 aa17.34■□□□□ 0.37
CIRBP-245ENST00000621399 OR8D2Q9GZM6 311 aa17.34■□□□□ 0.37
CIRBP-245ENST00000621399 ZNF552Q9H707 407 aaPredicted RBP17.34■□□□□ 0.37
CIRBP-245ENST00000621399 ZNF71Q9NQZ8 489 aaPredicted RBP17.34■□□□□ 0.37
CIRBP-245ENST00000621399 EHD3Q9NZN3 535 aa17.34■□□□□ 0.37
CIRBP-245ENST00000621399 PTGFRNQ9P2B2 879 aa17.34■□□□□ 0.37
CIRBP-245ENST00000621399 AKAP10O43572 662 aa17.33■□□□□ 0.36
CIRBP-245ENST00000621399 LRATO95237 230 aa17.33■□□□□ 0.36
CIRBP-245ENST00000621399 PRPS2P11908 318 aa17.33■□□□□ 0.36
CIRBP-245ENST00000621399 LBPP18428 481 aa17.33■□□□□ 0.36
CIRBP-245ENST00000621399 ASMTP46597 345 aa17.33■□□□□ 0.36
CIRBP-245ENST00000621399 CLCN2P51788 898 aa17.33■□□□□ 0.36
CIRBP-245ENST00000621399 VWA5B1Q5TIE3 1220 aa17.33■□□□□ 0.36
CIRBP-245ENST00000621399 TCTN3Q6NUS6 607 aa17.33■□□□□ 0.36
CIRBP-245ENST00000621399 FAM180BQ6P0A1 224 aa17.33■□□□□ 0.36
CIRBP-245ENST00000621399 RGS9BPQ6ZS82 235 aa17.33■□□□□ 0.36
CIRBP-245ENST00000621399 SAMD14Q8IZD0 417 aaPredicted RBP17.33■□□□□ 0.36
CIRBP-245ENST00000621399 KIF2BQ8N4N8 673 aa17.33■□□□□ 0.36
CIRBP-245ENST00000621399 LSM14AQ8ND56 463 aaKnown RBP17.33■□□□□ 0.36
CIRBP-245ENST00000621399 ELP5Q8TE02 316 aa17.33■□□□□ 0.36
CIRBP-245ENST00000621399 DOK4Q8TEW6 326 aa17.33■□□□□ 0.36
CIRBP-245ENST00000621399 PSMF1Q92530 271 aa17.33■□□□□ 0.36
CIRBP-245ENST00000621399 NCLNQ969V3 563 aa17.33■□□□□ 0.36
CIRBP-245ENST00000621399 VMP1Q96GC9 406 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms