RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 PNPOQ9NVS9 261 aa10.07□□□□□ -0.8
TARDBP-223ENST00000620632 PPIEQ9UNP9 301 aaKnown RBP10.07□□□□□ -0.8
TARDBP-223ENST00000620632 RAP2CQ9Y3L5 183 aa10.07□□□□□ -0.8
TARDBP-223ENST00000620632 ZNF451Q9Y4E5 1061 aa10.07□□□□□ -0.8
TARDBP-223ENST00000620632 GNG14A0A1W2PPG7 69 aa10.06□□□□□ -0.8
TARDBP-223ENST00000620632 C1orf226A1L170 272 aa10.06□□□□□ -0.8
TARDBP-223ENST00000620632 TMEM200CA6NKL6 621 aa10.06□□□□□ -0.8
TARDBP-223ENST00000620632 C17orf105B2RV13 164 aa10.06□□□□□ -0.8
TARDBP-223ENST00000620632 RGS14O43566 566 aa10.06□□□□□ -0.8
TARDBP-223ENST00000620632 SEC22BO75396 215 aa10.06□□□□□ -0.8
TARDBP-223ENST00000620632 F10P00742 488 aa10.06□□□□□ -0.8
TARDBP-223ENST00000620632 CLPSP04118 112 aa10.06□□□□□ -0.8
TARDBP-223ENST00000620632 ANXA4P09525 319 aaPredicted RBP10.06□□□□□ -0.8
TARDBP-223ENST00000620632 CT62P0C5K7 136 aa10.06□□□□□ -0.8
TARDBP-223ENST00000620632 ICAM2P13598 275 aa10.06□□□□□ -0.8
TARDBP-223ENST00000620632 ALOX15P16050 662 aaPredicted RBP10.06□□□□□ -0.8
TARDBP-223ENST00000620632 SDC1P18827 310 aa10.06□□□□□ -0.8
TARDBP-223ENST00000620632 GRK2P25098 689 aa10.06□□□□□ -0.8
TARDBP-223ENST00000620632 ALDH9A1P49189 494 aa10.06□□□□□ -0.8
TARDBP-223ENST00000620632 RPL38P63173 70 aaKnown RBP10.06□□□□□ -0.8
TARDBP-223ENST00000620632 ZNF763Q0D2J5 394 aa10.06□□□□□ -0.8
TARDBP-223ENST00000620632 MFAP5Q13361 173 aa10.06□□□□□ -0.8
TARDBP-223ENST00000620632 TERF2Q15554 542 aa10.06□□□□□ -0.8
TARDBP-223ENST00000620632 PDCD2Q16342 344 aaPredicted RBP10.06□□□□□ -0.8
TARDBP-223ENST00000620632 CRB2Q5IJ48 1285 aa10.06□□□□□ -0.8
TARDBP-223ENST00000620632 FAM71E1Q6IPT2 247 aa10.06□□□□□ -0.8
TARDBP-223ENST00000620632 JMJD6Q6NYC1 403 aaPredicted RBP10.06□□□□□ -0.8
TARDBP-223ENST00000620632 IGFL3Q6UXB1 125 aa10.06□□□□□ -0.8
TARDBP-223ENST00000620632 ISLR2Q6UXK2 745 aa10.06□□□□□ -0.8
TARDBP-223ENST00000620632 C16orf47Q6ZP98 133 aaPredicted RBP10.06□□□□□ -0.8
TARDBP-223ENST00000620632 CRLF3Q8IUI8 442 aa10.06□□□□□ -0.8
TARDBP-223ENST00000620632 Q8NA96 180 aa10.06□□□□□ -0.8
TARDBP-223ENST00000620632 SLC2A12Q8TD20 617 aa10.06□□□□□ -0.8
TARDBP-223ENST00000620632 ZNF721Q8TF20 911 aa10.06□□□□□ -0.8
TARDBP-223ENST00000620632 CNRIP1Q96F85 164 aaPredicted RBP10.06□□□□□ -0.8
TARDBP-223ENST00000620632 PPP1R36Q96LQ0 422 aa10.06□□□□□ -0.8
TARDBP-223ENST00000620632 ZNF681Q96N22 645 aa10.06□□□□□ -0.8
TARDBP-223ENST00000620632 DGAT2Q96PD7 388 aa10.06□□□□□ -0.8
TARDBP-223ENST00000620632 MFRPQ9BY79 579 aa10.06□□□□□ -0.8
TARDBP-223ENST00000620632 LIN28AQ9H9Z2 209 aaKnown RBP10.06□□□□□ -0.8
TARDBP-223ENST00000620632 WDR41Q9HAD4 459 aa10.06□□□□□ -0.8
TARDBP-223ENST00000620632 C1orf109Q9NX04 203 aa10.06□□□□□ -0.8
TARDBP-223ENST00000620632 NKIRAS1Q9NYS0 192 aa10.06□□□□□ -0.8
TARDBP-223ENST00000620632 PLA2G3Q9NZ20 509 aa10.06□□□□□ -0.8
TARDBP-223ENST00000620632 LUZP4Q9P127 313 aa10.06□□□□□ -0.8
TARDBP-223ENST00000620632 PCDHGB7Q9Y5F8 929 aa10.06□□□□□ -0.8
TARDBP-223ENST00000620632 SHANK1Q9Y566 2161 aa10.06□□□□□ -0.8
TARDBP-223ENST00000620632 SPTA1P02549 2419 aa10.05□□□□□ -0.8
TARDBP-223ENST00000620632 NUP214P35658 2090 aaPredicted RBP10.05□□□□□ -0.8
TARDBP-223ENST00000620632 TRBV11-1A0A0K0K1C0 115 aa10.05□□□□□ -0.8
TARDBP-223ENST00000620632 A8MUI8 341 aa10.05□□□□□ -0.8
TARDBP-223ENST00000620632 HMGB1P1B2RPK0 211 aaPredicted RBP10.05□□□□□ -0.8
TARDBP-223ENST00000620632 PEX11AO75192 247 aa10.05□□□□□ -0.8
TARDBP-223ENST00000620632 CHEK2O96017 543 aa10.05□□□□□ -0.8
TARDBP-223ENST00000620632 IGKV3-11P04433 115 aa10.05□□□□□ -0.8
TARDBP-223ENST00000620632 NEFHP12036 1026 aa10.05□□□□□ -0.8
TARDBP-223ENST00000620632 PIK3R1P27986 724 aa10.05□□□□□ -0.8
TARDBP-223ENST00000620632 FEN1P39748 380 aaKnown RBP10.05□□□□□ -0.8
TARDBP-223ENST00000620632 RPL14P50914 215 aaKnown RBP10.05□□□□□ -0.8
TARDBP-223ENST00000620632 HK2P52789 917 aa10.05□□□□□ -0.8
TARDBP-223ENST00000620632 PLIN5Q00G26 463 aa10.05□□□□□ -0.8
TARDBP-223ENST00000620632 OCRLQ01968 901 aa10.05□□□□□ -0.8
TARDBP-223ENST00000620632 GALNTL6Q49A17 601 aa10.05□□□□□ -0.8
TARDBP-223ENST00000620632 SLC6A19Q695T7 634 aa10.05□□□□□ -0.8
TARDBP-223ENST00000620632 ST13P4Q8IZP2 240 aaPredicted RBP10.05□□□□□ -0.8
TARDBP-223ENST00000620632 BEST3Q8N1M1 668 aa10.05□□□□□ -0.8
TARDBP-223ENST00000620632 TMEM132CQ8N3T6 1108 aa10.05□□□□□ -0.8
TARDBP-223ENST00000620632 CATSPER1Q8NEC5 780 aa10.05□□□□□ -0.8
TARDBP-223ENST00000620632 OR4K14Q8NGD5 310 aa10.05□□□□□ -0.8
TARDBP-223ENST00000620632 OR1N1Q8NGS0 311 aa10.05□□□□□ -0.8
TARDBP-223ENST00000620632 OR14A16Q8NHC5 309 aa10.05□□□□□ -0.8
TARDBP-223ENST00000620632 CDC26Q8NHZ8 85 aa10.05□□□□□ -0.8
TARDBP-223ENST00000620632 FAM76AQ8TAV0 307 aa10.05□□□□□ -0.8
TARDBP-223ENST00000620632 THAP3Q8WTV1 239 aaPredicted RBP10.05□□□□□ -0.8
TARDBP-223ENST00000620632 C19orf60Q96EN9 201 aa10.05□□□□□ -0.8
TARDBP-223ENST00000620632 VMP1Q96GC9 406 aa10.05□□□□□ -0.8
TARDBP-223ENST00000620632 OR8D2Q9GZM6 311 aa10.05□□□□□ -0.8
TARDBP-223ENST00000620632 ILKAPQ9H0C8 392 aaPredicted RBP10.05□□□□□ -0.8
TARDBP-223ENST00000620632 MANSC1Q9H8J5 431 aa10.05□□□□□ -0.8
TARDBP-223ENST00000620632 MYNNQ9NPC7 610 aa10.05□□□□□ -0.8
TARDBP-223ENST00000620632 G3BP2Q9UN86 482 aaKnown RBP10.05□□□□□ -0.8
TARDBP-223ENST00000620632 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.05□□□□□ -0.8
TARDBP-223ENST00000620632 CLCA3PQ9Y6N3 262 aa10.05□□□□□ -0.8
TARDBP-223ENST00000620632 ZNF354AO60765 605 aaPredicted RBP10.04□□□□□ -0.8
TARDBP-223ENST00000620632 GUCY1B2O75343 617 aa10.04□□□□□ -0.8
TARDBP-223ENST00000620632 ERAL1O75616 437 aaKnown RBP10.04□□□□□ -0.8
TARDBP-223ENST00000620632 SORBS2O94875 1100 aaKnown RBP10.04□□□□□ -0.8
TARDBP-223ENST00000620632 WDPCPO95876 746 aa10.04□□□□□ -0.8
TARDBP-223ENST00000620632 ALPPP05187 535 aa10.04□□□□□ -0.8
TARDBP-223ENST00000620632 SLC35E2P0CK97 266 aa10.04□□□□□ -0.8
TARDBP-223ENST00000620632 CPMP14384 443 aa10.04□□□□□ -0.8
TARDBP-223ENST00000620632 TNNI3P19429 210 aa10.04□□□□□ -0.8
TARDBP-223ENST00000620632 CLCN2P51788 898 aa10.04□□□□□ -0.8
TARDBP-223ENST00000620632 XKP51811 444 aa10.04□□□□□ -0.8
TARDBP-223ENST00000620632 ERVK-8P63133 956 aa10.04□□□□□ -0.8
TARDBP-223ENST00000620632 PPP2R2AP63151 447 aa10.04□□□□□ -0.8
TARDBP-223ENST00000620632 C2orf80Q0P641 193 aa10.04□□□□□ -0.8
TARDBP-223ENST00000620632 MGAT2Q10469 447 aa10.04□□□□□ -0.8
TARDBP-223ENST00000620632 KLRB1Q12918 225 aa10.04□□□□□ -0.8
TARDBP-223ENST00000620632 LTB4RQ15722 352 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms