RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 JMJD6Q6NYC1 403 aaPredicted RBP4.95□□□□□ -1.62
SHMT1-211ENST00000618902 ZNF793Q6ZN11 406 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 ZCCHC23Q6ZST2 131 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 FRMD7Q6ZUT3 714 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 CROCCP3Q8IVE0 287 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 AQP12AQ8IXF9 295 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 CCNYL1Q8N7R7 359 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 ZNF781Q8N8C0 355 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 SRFBP1Q8NEF9 429 aaKnown RBP4.95□□□□□ -1.62
SHMT1-211ENST00000618902 OR4F6Q8NGB9 312 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 OR5T3Q8NGG3 340 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 OR9A4Q8NGU2 314 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 HUS1BQ8NHY5 278 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 WDR20Q8TBZ3 569 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 NT5CQ8TCD5 201 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 ADAMTS17Q8TE56 1095 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 ADAMTS16Q8TE57 1224 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 ADAMTS18Q8TE60 1221 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 UTP15Q8TED0 518 aaKnown RBP4.95□□□□□ -1.62
SHMT1-211ENST00000618902 EXTL1Q92935 676 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 UBE2E3Q969T4 207 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 MS4A6EQ96DS6 147 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 MAGEB10Q96LZ2 347 aaPredicted RBP4.95□□□□□ -1.62
SHMT1-211ENST00000618902 QRFPRQ96P65 431 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 OR1F2PQ96R84 312 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 F2RL3Q96RI0 385 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 ZNF382Q96SR6 550 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 CDRT15Q96T59 188 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 HBEGFQ99075 208 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 SPSB2Q99619 263 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 SMAD5Q99717 465 aaKnown RBP4.95□□□□□ -1.62
SHMT1-211ENST00000618902 EFCAB11Q9BUY7 163 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 NTMT1Q9BV86 223 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 MS4A8Q9BY19 250 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 ZNF717Q9BY31 904 aaPredicted RBP4.95□□□□□ -1.62
SHMT1-211ENST00000618902 SHCBP1LQ9BZQ2 653 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 YIPF3Q9GZM5 350 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 ING2Q9H160 280 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 OR51B5Q9H339 312 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 ZNF385DQ9H6B1 395 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 ACTR8Q9H981 624 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 MEAF6Q9HAF1 191 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 ZNF304Q9HCX3 659 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 MKKSQ9NPJ1 570 aaPredicted RBP4.95□□□□□ -1.62
SHMT1-211ENST00000618902 ATP13A2Q9NQ11 1180 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 DMRT3Q9NQL9 472 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 ARMC1Q9NVT9 282 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 IRAK4Q9NWZ3 460 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 ZNF282Q9UDV7 671 aaPredicted RBP4.95□□□□□ -1.62
SHMT1-211ENST00000618902 MARCOQ9UEW3 520 aaPredicted RBP4.95□□□□□ -1.62
SHMT1-211ENST00000618902 ADGRE2Q9UHX3 823 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 DTNAQ9Y4J8 743 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 MAP4K5Q9Y4K4 846 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 TIMM22Q9Y584 194 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 AP4S1Q9Y587 144 aa4.95□□□□□ -1.62
SHMT1-211ENST00000618902 TNPO3Q9Y5L0 923 aaKnown RBP4.95□□□□□ -1.62
SHMT1-211ENST00000618902 UNC79Q9P2D8 2635 aa4.94□□□□□ -1.62
SHMT1-211ENST00000618902 NBPF19A0A087WUL8 3843 aa4.94□□□□□ -1.62
SHMT1-211ENST00000618902 CRYBG3Q68DQ2 2970 aa4.94□□□□□ -1.62
SHMT1-211ENST00000618902 C15orf38-AP3S2A0A0A6YYH1 394 aa4.94□□□□□ -1.62
SHMT1-211ENST00000618902 MAGEB17A8MXT2 336 aa4.94□□□□□ -1.62
SHMT1-211ENST00000618902 TMEM233B4DJY2 109 aa4.94□□□□□ -1.62
SHMT1-211ENST00000618902 FAM227AF5H4B4 570 aa4.94□□□□□ -1.62
SHMT1-211ENST00000618902 H0YIV9 168 aa4.94□□□□□ -1.62
SHMT1-211ENST00000618902 TGFBR3LH3BV60 316 aa4.94□□□□□ -1.62
SHMT1-211ENST00000618902 J3QKU1 62 aa4.94□□□□□ -1.62
SHMT1-211ENST00000618902 PSMD12O00232 456 aaPredicted RBP4.94□□□□□ -1.62
SHMT1-211ENST00000618902 SAP18O00422 153 aaKnown RBP4.94□□□□□ -1.62
SHMT1-211ENST00000618902 MANBAO00462 879 aa4.94□□□□□ -1.62
SHMT1-211ENST00000618902 ACOT8O14734 319 aa4.94□□□□□ -1.62
SHMT1-211ENST00000618902 AIM2O14862 343 aa4.94□□□□□ -1.62
SHMT1-211ENST00000618902 UBDO15205 165 aa4.94□□□□□ -1.62
SHMT1-211ENST00000618902 UGDHO60701 494 aa4.94□□□□□ -1.62
SHMT1-211ENST00000618902 GALR3O60755 368 aaPredicted RBP4.94□□□□□ -1.62
SHMT1-211ENST00000618902 DPM1O60762 260 aa4.94□□□□□ -1.62
SHMT1-211ENST00000618902 EEDO75530 441 aaKnown RBP4.94□□□□□ -1.62
SHMT1-211ENST00000618902 LYPLA1O75608 230 aaPredicted RBP4.94□□□□□ -1.62
SHMT1-211ENST00000618902 SUPT7LO94864 414 aa4.94□□□□□ -1.62
SHMT1-211ENST00000618902 NSA2O95478 260 aaKnown RBP4.94□□□□□ -1.62
SHMT1-211ENST00000618902 CLDN9O95484 217 aa4.94□□□□□ -1.62
SHMT1-211ENST00000618902 TGFB1P01137 390 aa4.94□□□□□ -1.62
SHMT1-211ENST00000618902 C8BP07358 591 aa4.94□□□□□ -1.62
SHMT1-211ENST00000618902 SNRPB2P08579 225 aaKnown RBP4.94□□□□□ -1.62
SHMT1-211ENST00000618902 PCNAP12004 261 aa4.94□□□□□ -1.62
SHMT1-211ENST00000618902 BMP2P12643 396 aa4.94□□□□□ -1.62
SHMT1-211ENST00000618902 ALOX12P18054 663 aa4.94□□□□□ -1.62
SHMT1-211ENST00000618902 ALAS2P22557 587 aa4.94□□□□□ -1.62
SHMT1-211ENST00000618902 SLC7A1P30825 629 aa4.94□□□□□ -1.62
SHMT1-211ENST00000618902 AVPR1BP47901 424 aa4.94□□□□□ -1.62
SHMT1-211ENST00000618902 CPA2P48052 419 aa4.94□□□□□ -1.62
SHMT1-211ENST00000618902 PGDP52209 483 aa4.94□□□□□ -1.62
SHMT1-211ENST00000618902 HNRNPFP52597 415 aaKnown RBP4.94□□□□□ -1.62
SHMT1-211ENST00000618902 RAB8AP61006 207 aa4.94□□□□□ -1.62
SHMT1-211ENST00000618902 STX1BP61266 288 aa4.94□□□□□ -1.62
SHMT1-211ENST00000618902 RPS13P62277 151 aaKnown RBP4.94□□□□□ -1.62
SHMT1-211ENST00000618902 ESRRGP62508 458 aa4.94□□□□□ -1.62
SHMT1-211ENST00000618902 TXNL4AP83876 142 aaKnown RBP4.94□□□□□ -1.62
SHMT1-211ENST00000618902 BNIP2Q12982 314 aa4.94□□□□□ -1.62
SHMT1-211ENST00000618902 LCP2Q13094 533 aa4.94□□□□□ -1.62
SHMT1-211ENST00000618902 LSAMPQ13449 338 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms