RNA–Protein interactions for RNA: ENST00000618771.1

TRAF4-217, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-217ENST00000618771 PRF1P14222 555 aa20.28■□□□□ 0.84
TRAF4-217ENST00000618771 TAC1P20366 129 aa20.28■□□□□ 0.84
TRAF4-217ENST00000618771 SOX3P41225 446 aa20.28■□□□□ 0.84
TRAF4-217ENST00000618771 HERVK_113P63132 956 aa20.28■□□□□ 0.84
TRAF4-217ENST00000618771 SGO1Q5FBB7 561 aa20.28■□□□□ 0.84
TRAF4-217ENST00000618771 IL20RBQ6UXL0 311 aa20.28■□□□□ 0.84
TRAF4-217ENST00000618771 DGAT2L6Q6ZPD8 337 aa20.28■□□□□ 0.84
TRAF4-217ENST00000618771 ST13P4Q8IZP2 240 aaPredicted RBP20.28■□□□□ 0.84
TRAF4-217ENST00000618771 GHDCQ8N2G8 530 aa20.28■□□□□ 0.84
TRAF4-217ENST00000618771 PSD4Q8NDX1 1056 aa20.28■□□□□ 0.84
TRAF4-217ENST00000618771 OR5L2Q8NGL0 311 aa20.28■□□□□ 0.84
TRAF4-217ENST00000618771 SENP5Q96HI0 755 aaPredicted RBP20.28■□□□□ 0.84
TRAF4-217ENST00000618771 ART5Q96L15 291 aa20.28■□□□□ 0.84
TRAF4-217ENST00000618771 PELOQ9BRX2 385 aaKnown RBP20.28■□□□□ 0.84
TRAF4-217ENST00000618771 ERVK-6Q9BXR3 956 aa20.28■□□□□ 0.84
TRAF4-217ENST00000618771 EPB41L4BQ9H329 900 aa20.28■□□□□ 0.84
TRAF4-217ENST00000618771 PSMC3IPQ9P2W1 217 aaPredicted RBP20.28■□□□□ 0.84
TRAF4-217ENST00000618771 OTOGQ6ZRI0 2925 aa20.27■□□□□ 0.84
TRAF4-217ENST00000618771 A0A1B0GTL3 188 aa20.27■□□□□ 0.84
TRAF4-217ENST00000618771 PPP6CO00743 305 aa20.27■□□□□ 0.84
TRAF4-217ENST00000618771 TFECO14948 347 aaPredicted RBP20.27■□□□□ 0.84
TRAF4-217ENST00000618771 GPR75O95800 540 aa20.27■□□□□ 0.84
TRAF4-217ENST00000618771 TSPAN8P19075 237 aa20.27■□□□□ 0.84
TRAF4-217ENST00000618771 RFC3P40938 356 aa20.27■□□□□ 0.84
TRAF4-217ENST00000618771 GPR85P60893 370 aa20.27■□□□□ 0.84
TRAF4-217ENST00000618771 C3AR1Q16581 482 aa20.27■□□□□ 0.84
TRAF4-217ENST00000618771 SP5Q6BEB4 398 aaPredicted RBP20.27■□□□□ 0.84
TRAF4-217ENST00000618771 LETMD1Q6P1Q0 360 aa20.27■□□□□ 0.84
TRAF4-217ENST00000618771 SPPL2CQ8IUH8 684 aa20.27■□□□□ 0.84
TRAF4-217ENST00000618771 CCDC120Q96HB5 630 aa20.27■□□□□ 0.84
TRAF4-217ENST00000618771 FBXL20Q96IG2 436 aa20.27■□□□□ 0.84
TRAF4-217ENST00000618771 MRPL1Q9BYD6 325 aaKnown RBP20.27■□□□□ 0.84
TRAF4-217ENST00000618771 AHSPQ9NZD4 102 aa20.27■□□□□ 0.84
TRAF4-217ENST00000618771 TINAGQ9UJW2 476 aa20.27■□□□□ 0.84
TRAF4-217ENST00000618771 ENTPD4Q9Y227 616 aa20.27■□□□□ 0.84
TRAF4-217ENST00000618771 ZNF835Q9Y2P0 537 aa20.27■□□□□ 0.84
TRAF4-217ENST00000618771 WASHC1A8K0Z3 465 aa20.26■□□□□ 0.83
TRAF4-217ENST00000618771 GOLGA8RI6L899 631 aa20.26■□□□□ 0.83
TRAF4-217ENST00000618771 OR10H2O60403 315 aa20.26■□□□□ 0.83
TRAF4-217ENST00000618771 IGKV3-11P04433 115 aa20.26■□□□□ 0.83
TRAF4-217ENST00000618771 ELAVL4P26378 380 aaKnown RBP20.26■□□□□ 0.83
TRAF4-217ENST00000618771 CLCQ05315 142 aa20.26■□□□□ 0.83
TRAF4-217ENST00000618771 OR52E8Q6IFG1 317 aa20.26■□□□□ 0.83
TRAF4-217ENST00000618771 MTFR2Q6P444 385 aa20.26■□□□□ 0.83
TRAF4-217ENST00000618771 Q6ZPB1 254 aaPredicted RBP20.26■□□□□ 0.83
TRAF4-217ENST00000618771 PAGE2Q7Z2X7 111 aa20.26■□□□□ 0.83
TRAF4-217ENST00000618771 ZFP62Q8NB50 900 aaPredicted RBP20.26■□□□□ 0.83
TRAF4-217ENST00000618771 MYRIPQ8NFW9 859 aa20.26■□□□□ 0.83
TRAF4-217ENST00000618771 NUBPLQ8TB37 319 aa20.26■□□□□ 0.83
TRAF4-217ENST00000618771 ACMSDQ8TDX5 336 aa20.26■□□□□ 0.83
TRAF4-217ENST00000618771 TRPC4APQ8TEL6 797 aa20.26■□□□□ 0.83
TRAF4-217ENST00000618771 CNPPD1Q9BV87 410 aa20.26■□□□□ 0.83
TRAF4-217ENST00000618771 FARSBQ9NSD9 589 aaKnown RBP20.26■□□□□ 0.83
TRAF4-217ENST00000618771 TEX10Q9NXF1 929 aaPredicted RBP20.26■□□□□ 0.83
TRAF4-217ENST00000618771 ADAM29Q9UKF5 820 aa20.26■□□□□ 0.83
TRAF4-217ENST00000618771 SNX6Q9UNH7 406 aa20.26■□□□□ 0.83
TRAF4-217ENST00000618771 SLC12A4Q9UP95 1085 aa20.26■□□□□ 0.83
TRAF4-217ENST00000618771 CACNA1CQ13936 2221 aa20.26■□□□□ 0.83
TRAF4-217ENST00000618771 ANKRD17O75179 2603 aaKnown RBP20.25■□□□□ 0.83
TRAF4-217ENST00000618771 HRKO00198 91 aa20.25■□□□□ 0.83
TRAF4-217ENST00000618771 DLX3O60479 287 aa20.25■□□□□ 0.83
TRAF4-217ENST00000618771 SUPT7LO94864 414 aa20.25■□□□□ 0.83
TRAF4-217ENST00000618771 KLK1P06870 262 aa20.25■□□□□ 0.83
TRAF4-217ENST00000618771 ABOP16442 354 aa20.25■□□□□ 0.83
TRAF4-217ENST00000618771 HSD17B3P37058 310 aa20.25■□□□□ 0.83
TRAF4-217ENST00000618771 ERVK-8P63133 956 aa20.25■□□□□ 0.83
TRAF4-217ENST00000618771 HSF1Q00613 529 aa20.25■□□□□ 0.83
TRAF4-217ENST00000618771 MPEG1Q2M385 716 aa20.25■□□□□ 0.83
TRAF4-217ENST00000618771 SPRED3Q2MJR0 410 aa20.25■□□□□ 0.83
TRAF4-217ENST00000618771 OPN5Q6U736 354 aa20.25■□□□□ 0.83
TRAF4-217ENST00000618771 RTL4Q6ZR62 310 aa20.25■□□□□ 0.83
TRAF4-217ENST00000618771 C9orf40Q8IXQ3 194 aa20.25■□□□□ 0.83
TRAF4-217ENST00000618771 CNPY4Q8N129 248 aa20.25■□□□□ 0.83
TRAF4-217ENST00000618771 METTL4Q8N3J2 472 aa20.25■□□□□ 0.83
TRAF4-217ENST00000618771 EIF1ADQ8N9N8 165 aaKnown RBP20.25■□□□□ 0.83
TRAF4-217ENST00000618771 C16orf52Q8NHV5 167 aa20.25■□□□□ 0.83
TRAF4-217ENST00000618771 DOK4Q8TEW6 326 aa20.25■□□□□ 0.83
TRAF4-217ENST00000618771 SELENOMQ8WWX9 145 aa20.25■□□□□ 0.83
TRAF4-217ENST00000618771 UCN3Q969E3 161 aa20.25■□□□□ 0.83
TRAF4-217ENST00000618771 TMEM237Q96Q45 408 aa20.25■□□□□ 0.83
TRAF4-217ENST00000618771 PHF12Q96QT6 1004 aa20.25■□□□□ 0.83
TRAF4-217ENST00000618771 DEPPQ9NTK1 212 aa20.25■□□□□ 0.83
TRAF4-217ENST00000618771 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.25■□□□□ 0.837e-6■■■□□ 16.5
TRAF4-217ENST00000618771 TBK1Q9UHD2 729 aa20.25■□□□□ 0.83
TRAF4-217ENST00000618771 TRPS1Q9UHF7 1281 aa20.25■□□□□ 0.83
TRAF4-217ENST00000618771 ERVK-19Q9WJR5 959 aa20.25■□□□□ 0.83
TRAF4-217ENST00000618771 NINQ8N4C6 2090 aa20.25■□□□□ 0.83
TRAF4-217ENST00000618771 POLQO75417 2590 aa20.24■□□□□ 0.83
TRAF4-217ENST00000618771 PRSS44E7EML9 344 aa20.24■□□□□ 0.83
TRAF4-217ENST00000618771 ZNF354AO60765 605 aaPredicted RBP20.24■□□□□ 0.83
TRAF4-217ENST00000618771 OR4F21O95013 312 aa20.24■□□□□ 0.83
TRAF4-217ENST00000618771 PDYNP01213 254 aa20.24■□□□□ 0.83
TRAF4-217ENST00000618771 PYGBP11216 843 aa20.24■□□□□ 0.83
TRAF4-217ENST00000618771 ATP5F1P24539 256 aaPredicted RBP20.24■□□□□ 0.83
TRAF4-217ENST00000618771 PTGER1P34995 402 aa20.24■□□□□ 0.83
TRAF4-217ENST00000618771 ASPHQ12797 758 aa20.24■□□□□ 0.83
TRAF4-217ENST00000618771 ZNF267Q14586 743 aaPredicted RBP20.24■□□□□ 0.83
TRAF4-217ENST00000618771 UNC50Q53HI1 259 aa20.24■□□□□ 0.83
TRAF4-217ENST00000618771 ZNF678Q5SXM1 525 aa20.24■□□□□ 0.83
TRAF4-217ENST00000618771 CCNYL2Q5T2Q4 361 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms