RNA–Protein interactions for RNA: ENST00000613947.1

CCL4-201, Transcript of C-C motif chemokine ligand 4, humanhuman

Gene CCL4, Length 1,774 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4-201ENST00000613947 PALMDQ9NP74 551 aa12.13□□□□□ -0.47
CCL4-201ENST00000613947 MID1IP1Q9NPA3 183 aa12.13□□□□□ -0.47
CCL4-201ENST00000613947 TRPS1Q9UHF7 1281 aa12.13□□□□□ -0.47
CCL4-201ENST00000613947 PADI2Q9Y2J8 665 aa12.13□□□□□ -0.47
CCL4-201ENST00000613947 MED13Q9UHV7 2174 aa12.12□□□□□ -0.47
CCL4-201ENST00000613947 hCG_2014768A0A024R1R8 64 aa12.12□□□□□ -0.47
CCL4-201ENST00000613947 FOXE1O00358 373 aaPredicted RBP12.12□□□□□ -0.47
CCL4-201ENST00000613947 SAP18O00422 153 aaKnown RBP12.12□□□□□ -0.47
CCL4-201ENST00000613947 ETHE1O95571 254 aa12.12□□□□□ -0.47
CCL4-201ENST00000613947 ESRRBO95718 433 aa12.12□□□□□ -0.47
CCL4-201ENST00000613947 CD63P08962 238 aa12.12□□□□□ -0.47
CCL4-201ENST00000613947 FURINP09958 794 aa12.12□□□□□ -0.47
CCL4-201ENST00000613947 ZGLP1P0C6A0 271 aa12.12□□□□□ -0.47
CCL4-201ENST00000613947 PKNOX1P55347 436 aa12.12□□□□□ -0.47
CCL4-201ENST00000613947 NAA20P61599 178 aa12.12□□□□□ -0.47
CCL4-201ENST00000613947 OLR1P78380 273 aa12.12□□□□□ -0.47
CCL4-201ENST00000613947 SGO1Q5FBB7 561 aa12.12□□□□□ -0.47
CCL4-201ENST00000613947 DEPDC1Q5TB30 811 aa12.12□□□□□ -0.47
CCL4-201ENST00000613947 KHDRBS2Q5VWX1 349 aaKnown RBP12.12□□□□□ -0.47
CCL4-201ENST00000613947 TRIM40Q6P9F5 258 aa12.12□□□□□ -0.47
CCL4-201ENST00000613947 BNC2Q6ZN30 1099 aaPredicted RBP12.12□□□□□ -0.47
CCL4-201ENST00000613947 ZCCHC23Q6ZST2 131 aa12.12□□□□□ -0.47
CCL4-201ENST00000613947 NCCRP1Q6ZVX7 275 aaPredicted RBP12.12□□□□□ -0.47
CCL4-201ENST00000613947 CHSY3Q70JA7 882 aa12.12□□□□□ -0.47
CCL4-201ENST00000613947 LAPTM4BQ86VI4 370 aa12.12□□□□□ -0.47
CCL4-201ENST00000613947 TRIML2Q8N7C3 387 aa12.12□□□□□ -0.47
CCL4-201ENST00000613947 TMEM102Q8N9M5 508 aaPredicted RBP12.12□□□□□ -0.47
CCL4-201ENST00000613947 METTL6Q8TCB7 284 aa12.12□□□□□ -0.47
CCL4-201ENST00000613947 DUS3LQ96G46 650 aaKnown RBP12.12□□□□□ -0.47
CCL4-201ENST00000613947 FAR2Q96K12 515 aa12.12□□□□□ -0.47
CCL4-201ENST00000613947 KCNA7Q96RP8 456 aa12.12□□□□□ -0.47
CCL4-201ENST00000613947 CCT7Q99832 543 aa12.12□□□□□ -0.47
CCL4-201ENST00000613947 SHCBP1LQ9BZQ2 653 aa12.12□□□□□ -0.47
CCL4-201ENST00000613947 PRORYQ9H606 182 aa12.12□□□□□ -0.47
CCL4-201ENST00000613947 SOX17Q9H6I2 414 aaPredicted RBP12.12□□□□□ -0.47
CCL4-201ENST00000613947 MKKSQ9NPJ1 570 aaPredicted RBP12.12□□□□□ -0.47
CCL4-201ENST00000613947 FARSBQ9NSD9 589 aaKnown RBP12.12□□□□□ -0.47
CCL4-201ENST00000613947 PNPLA3Q9NST1 481 aa12.12□□□□□ -0.47
CCL4-201ENST00000613947 ZNF232Q9UNY5 417 aa12.12□□□□□ -0.47
CCL4-201ENST00000613947 BSNQ9UPA5 3926 aa12.11□□□□□ -0.47
CCL4-201ENST00000613947 FAM208BQ5VWN6 2430 aa12.11□□□□□ -0.47
CCL4-201ENST00000613947 H3BNH8 94 aa12.11□□□□□ -0.47
CCL4-201ENST00000613947 RTCAO00442 366 aaKnown RBP12.11□□□□□ -0.47
CCL4-201ENST00000613947 JRKO75564 520 aa12.11□□□□□ -0.47
CCL4-201ENST00000613947 SORBS2O94875 1100 aaKnown RBP12.11□□□□□ -0.47
CCL4-201ENST00000613947 PDYNP01213 254 aa12.11□□□□□ -0.47
CCL4-201ENST00000613947 UMODP07911 640 aa12.11□□□□□ -0.47
CCL4-201ENST00000613947 PTX3P26022 381 aaPredicted RBP12.11□□□□□ -0.47
CCL4-201ENST00000613947 TTKP33981 857 aa12.11□□□□□ -0.47
CCL4-201ENST00000613947 FOLR3P41439 243 aa12.11□□□□□ -0.47
CCL4-201ENST00000613947 XCR1P46094 333 aa12.11□□□□□ -0.47
CCL4-201ENST00000613947 FOXA1P55317 472 aa12.11□□□□□ -0.47
CCL4-201ENST00000613947 SKP1P63208 163 aa12.11□□□□□ -0.47
CCL4-201ENST00000613947 MC1RQ01726 317 aa12.11□□□□□ -0.47
CCL4-201ENST00000613947 FLOT2Q14254 428 aa12.11□□□□□ -0.47
CCL4-201ENST00000613947 KCTD21Q4G0X4 260 aa12.11□□□□□ -0.47
CCL4-201ENST00000613947 TMEM35AQ53FP2 167 aa12.11□□□□□ -0.47
CCL4-201ENST00000613947 NIPAL1Q6NVV3 410 aa12.11□□□□□ -0.47
CCL4-201ENST00000613947 CARM1Q86X55 608 aa12.11□□□□□ -0.47
CCL4-201ENST00000613947 ZC3H7AQ8IWR0 971 aaKnown RBP12.11□□□□□ -0.47
CCL4-201ENST00000613947 BORCS5Q969J3 196 aa12.11□□□□□ -0.47
CCL4-201ENST00000613947 COX4I2Q96KJ9 171 aa12.11□□□□□ -0.47
CCL4-201ENST00000613947 TGIF2Q9GZN2 237 aa12.11□□□□□ -0.47
CCL4-201ENST00000613947 TNFRSF12AQ9NP84 129 aa12.11□□□□□ -0.47
CCL4-201ENST00000613947 PRDM7Q9NQW5 492 aa12.11□□□□□ -0.47
CCL4-201ENST00000613947 MRGBPQ9NV56 204 aa12.11□□□□□ -0.47
CCL4-201ENST00000613947 NXT1Q9UKK6 140 aaKnown RBP12.11□□□□□ -0.47
CCL4-201ENST00000613947 SNX6Q9UNH7 406 aa12.11□□□□□ -0.47
CCL4-201ENST00000613947 MYRFQ9Y2G1 1151 aa12.11□□□□□ -0.47
CCL4-201ENST00000613947 TIMM22Q9Y584 194 aa12.11□□□□□ -0.47
CCL4-201ENST00000613947 CNTRLQ7Z7A1 2325 aa12.1□□□□□ -0.47
CCL4-201ENST00000613947 CDC14CA4D256 554 aa12.1□□□□□ -0.47
CCL4-201ENST00000613947 MANBAO00462 879 aa12.1□□□□□ -0.47
CCL4-201ENST00000613947 CHST10O43529 356 aa12.1□□□□□ -0.47
CCL4-201ENST00000613947 E2F6O75461 281 aa12.1□□□□□ -0.47
CCL4-201ENST00000613947 LYPLA1O75608 230 aaPredicted RBP12.1□□□□□ -0.47
CCL4-201ENST00000613947 RECKO95980 971 aa12.1□□□□□ -0.47
CCL4-201ENST00000613947 ZNF26P17031 533 aaPredicted RBP12.1□□□□□ -0.47
CCL4-201ENST00000613947 ME2P23368 584 aa12.1□□□□□ -0.47
CCL4-201ENST00000613947 HMOX2P30519 316 aa12.1□□□□□ -0.47
CCL4-201ENST00000613947 CDC20Q12834 499 aa12.1□□□□□ -0.47
CCL4-201ENST00000613947 SSPNQ14714 243 aa12.1□□□□□ -0.47
CCL4-201ENST00000613947 CRTC2Q53ET0 693 aaPredicted RBP12.1□□□□□ -0.47
CCL4-201ENST00000613947 C10orf62Q5T681 223 aaPredicted RBP12.1□□□□□ -0.47
CCL4-201ENST00000613947 HIPK4Q8NE63 616 aa12.1□□□□□ -0.47
CCL4-201ENST00000613947 SRFBP1Q8NEF9 429 aaKnown RBP12.1□□□□□ -0.47
CCL4-201ENST00000613947 ZNF420Q8TAQ5 688 aaPredicted RBP12.1□□□□□ -0.47
CCL4-201ENST00000613947 ADAMTS17Q8TE56 1095 aa12.1□□□□□ -0.47
CCL4-201ENST00000613947 SELENOMQ8WWX9 145 aa12.1□□□□□ -0.47
CCL4-201ENST00000613947 SREK1Q8WXA9 508 aaKnown RBP12.1□□□□□ -0.47
CCL4-201ENST00000613947 PEX11GQ96HA9 241 aa12.1□□□□□ -0.47
CCL4-201ENST00000613947 QRFPRQ96P65 431 aa12.1□□□□□ -0.47
CCL4-201ENST00000613947 KCNC2Q96PR1 638 aa12.1□□□□□ -0.47
CCL4-201ENST00000613947 HBEGFQ99075 208 aa12.1□□□□□ -0.47
CCL4-201ENST00000613947 SORBS1Q9BX66 1292 aaKnown RBP12.1□□□□□ -0.47
CCL4-201ENST00000613947 SLC29A3Q9BZD2 475 aa12.1□□□□□ -0.47
CCL4-201ENST00000613947 TBC1D23Q9NUY8 699 aa12.1□□□□□ -0.47
CCL4-201ENST00000613947 PNPOQ9NVS9 261 aa12.1□□□□□ -0.47
CCL4-201ENST00000613947 PPT2Q9UMR5 302 aa12.1□□□□□ -0.47
CCL4-201ENST00000613947 TMED5Q9Y3A6 229 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms