RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 PCDH7O60245 1069 aa13.3□□□□□ -0.28
HDDC2-209ENST00000609477 DDAH2O95865 285 aa13.3□□□□□ -0.28
HDDC2-209ENST00000609477 TIA1P31483 386 aaKnown RBP eCLIP13.3□□□□□ -0.289e-6■□□□□ 8.3
HDDC2-209ENST00000609477 SERPINB4P48594 390 aa13.3□□□□□ -0.28
HDDC2-209ENST00000609477 HTR6P50406 440 aa13.3□□□□□ -0.28
HDDC2-209ENST00000609477 MLLT10P55197 1068 aa13.3□□□□□ -0.28
HDDC2-209ENST00000609477 ARL13AQ5H913 290 aaPredicted RBP13.3□□□□□ -0.28
HDDC2-209ENST00000609477 SPDYAQ5MJ70 313 aa13.3□□□□□ -0.28
HDDC2-209ENST00000609477 KANK2Q63ZY3 851 aa13.3□□□□□ -0.28
HDDC2-209ENST00000609477 ATCAYQ86WG3 371 aa13.3□□□□□ -0.28
HDDC2-209ENST00000609477 OR4N5Q8IXE1 308 aa13.3□□□□□ -0.28
HDDC2-209ENST00000609477 GPALPP1Q8IXQ4 340 aa13.3□□□□□ -0.28
HDDC2-209ENST00000609477 BEST3Q8N1M1 668 aa13.3□□□□□ -0.28
HDDC2-209ENST00000609477 KIF2BQ8N4N8 673 aa13.3□□□□□ -0.28
HDDC2-209ENST00000609477 SLC2A12Q8TD20 617 aa13.3□□□□□ -0.28
HDDC2-209ENST00000609477 RIT1Q92963 219 aa13.3□□□□□ -0.28
HDDC2-209ENST00000609477 MIB2Q96AX9 1013 aa13.3□□□□□ -0.28
HDDC2-209ENST00000609477 SENP5Q96HI0 755 aaPredicted RBP13.3□□□□□ -0.28
HDDC2-209ENST00000609477 FBXL20Q96IG2 436 aa13.3□□□□□ -0.28
HDDC2-209ENST00000609477 BARD1Q99728 777 aaKnown RBP13.3□□□□□ -0.28
HDDC2-209ENST00000609477 NPAS2Q99743 824 aa13.3□□□□□ -0.28
HDDC2-209ENST00000609477 MECRQ9BV79 373 aa13.3□□□□□ -0.28
HDDC2-209ENST00000609477 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.3□□□□□ -0.28
HDDC2-209ENST00000609477 PFDN4Q9NQP4 134 aa13.3□□□□□ -0.28
HDDC2-209ENST00000609477 AGPAT4Q9NRZ5 378 aa13.3□□□□□ -0.28
HDDC2-209ENST00000609477 ARGLU1Q9NWB6 273 aaPredicted RBP13.3□□□□□ -0.28
HDDC2-209ENST00000609477 EHD3Q9NZN3 535 aa13.3□□□□□ -0.28
HDDC2-209ENST00000609477 CES1P1Q9UKY3 287 aa13.3□□□□□ -0.28
HDDC2-209ENST00000609477 YARS2Q9Y2Z4 477 aaKnown RBP13.3□□□□□ -0.28
HDDC2-209ENST00000609477 TRAF6Q9Y4K3 522 aa13.3□□□□□ -0.28
HDDC2-209ENST00000609477 COPG1Q9Y678 874 aaKnown RBP13.3□□□□□ -0.28
HDDC2-209ENST00000609477 GLOD5A6NK44 160 aa13.29□□□□□ -0.28
HDDC2-209ENST00000609477 OR6C76A6NM76 312 aa13.29□□□□□ -0.28
HDDC2-209ENST00000609477 GABRR3A8MPY1 467 aa13.29□□□□□ -0.28
HDDC2-209ENST00000609477 OR10H2O60403 315 aa13.29□□□□□ -0.28
HDDC2-209ENST00000609477 PRAMEF2O60811 474 aa13.29□□□□□ -0.28
HDDC2-209ENST00000609477 WISP1O95388 367 aa13.29□□□□□ -0.28
HDDC2-209ENST00000609477 IGKV3-11P04433 115 aa13.29□□□□□ -0.28
HDDC2-209ENST00000609477 DHRS4L1P0CG22 281 aa13.29□□□□□ -0.28
HDDC2-209ENST00000609477 CHN1P15882 459 aa13.29□□□□□ -0.28
HDDC2-209ENST00000609477 PORP16435 677 aaPredicted RBP13.29□□□□□ -0.28
HDDC2-209ENST00000609477 GRK2P25098 689 aa13.29□□□□□ -0.28
HDDC2-209ENST00000609477 CYB561P49447 251 aa13.29□□□□□ -0.28
HDDC2-209ENST00000609477 XKP51811 444 aa13.29□□□□□ -0.28
HDDC2-209ENST00000609477 HMGCS1Q01581 520 aa13.29□□□□□ -0.28
HDDC2-209ENST00000609477 TUBA3CQ13748 450 aa13.29□□□□□ -0.28
HDDC2-209ENST00000609477 CASP8Q14790 479 aa13.29□□□□□ -0.28
HDDC2-209ENST00000609477 TUBA3EQ6PEY2 450 aa13.29□□□□□ -0.28
HDDC2-209ENST00000609477 GALNT11Q8NCW6 608 aa13.29□□□□□ -0.28
HDDC2-209ENST00000609477 CATSPER1Q8NEC5 780 aa13.29□□□□□ -0.28
HDDC2-209ENST00000609477 PPP1R14CQ8TAE6 165 aa13.29□□□□□ -0.28
HDDC2-209ENST00000609477 NUBPLQ8TB37 319 aa13.29□□□□□ -0.28
HDDC2-209ENST00000609477 ZNF721Q8TF20 911 aa13.29□□□□□ -0.28
HDDC2-209ENST00000609477 SNRNP40Q96DI7 357 aaKnown RBP13.29□□□□□ -0.28
HDDC2-209ENST00000609477 APIPQ96GX9 242 aa13.29□□□□□ -0.28
HDDC2-209ENST00000609477 OR8D2Q9GZM6 311 aa13.29□□□□□ -0.28
HDDC2-209ENST00000609477 PLA2G3Q9NZ20 509 aa13.29□□□□□ -0.28
HDDC2-209ENST00000609477 MYOTQ9UBF9 498 aa13.29□□□□□ -0.28
HDDC2-209ENST00000609477 ZNF223Q9UK11 482 aaPredicted RBP13.29□□□□□ -0.28
HDDC2-209ENST00000609477 TMED5Q9Y3A6 229 aa13.29□□□□□ -0.28
HDDC2-209ENST00000609477 CCL27Q9Y4X3 112 aa13.29□□□□□ -0.28
HDDC2-209ENST00000609477 CSAG2Q9Y5P2 127 aa13.29□□□□□ -0.28
HDDC2-209ENST00000609477 DNAJC15Q9Y5T4 150 aa13.29□□□□□ -0.28
HDDC2-209ENST00000609477 CNTRLQ7Z7A1 2325 aa13.29□□□□□ -0.28
HDDC2-209ENST00000609477 GCN1Q92616 2671 aaKnown RBP13.28□□□□□ -0.28
HDDC2-209ENST00000609477 TMEM114B3SHH9 223 aa13.28□□□□□ -0.28
HDDC2-209ENST00000609477 VPS4BO75351 444 aa13.28□□□□□ -0.28
HDDC2-209ENST00000609477 PRKRAO75569 313 aaKnown RBP13.28□□□□□ -0.28
HDDC2-209ENST00000609477 ATP1B1P05026 303 aa13.28□□□□□ -0.28
HDDC2-209ENST00000609477 SERPINE1P05121 402 aa13.28□□□□□ -0.28
HDDC2-209ENST00000609477 ANXA4P09525 319 aaPredicted RBP13.28□□□□□ -0.28
HDDC2-209ENST00000609477 CPMP14384 443 aa13.28□□□□□ -0.28
HDDC2-209ENST00000609477 CD46P15529 392 aa13.28□□□□□ -0.28
HDDC2-209ENST00000609477 CSNK2A2P19784 350 aaPredicted RBP13.28□□□□□ -0.28
HDDC2-209ENST00000609477 SERPINB3P29508 390 aa13.28□□□□□ -0.28
HDDC2-209ENST00000609477 CD96P40200 585 aa13.28□□□□□ -0.28
HDDC2-209ENST00000609477 HLCSP50747 726 aa13.28□□□□□ -0.28
HDDC2-209ENST00000609477 RNF4P78317 190 aa13.28□□□□□ -0.28
HDDC2-209ENST00000609477 RAE1P78406 368 aaKnown RBP13.28□□□□□ -0.28
HDDC2-209ENST00000609477 ID2Q02363 134 aa13.28□□□□□ -0.28
HDDC2-209ENST00000609477 ZNF763Q0D2J5 394 aa13.28□□□□□ -0.28
HDDC2-209ENST00000609477 MPEG1Q2M385 716 aa13.28□□□□□ -0.28
HDDC2-209ENST00000609477 C6orf163Q5TEZ5 329 aa13.28□□□□□ -0.28
HDDC2-209ENST00000609477 FCRLBQ6BAA4 426 aa13.28□□□□□ -0.28
HDDC2-209ENST00000609477 CLEC6AQ6EIG7 209 aa13.28□□□□□ -0.28
HDDC2-209ENST00000609477 IKBIPQ70UQ0 350 aa13.28□□□□□ -0.28
HDDC2-209ENST00000609477 TMEM178AQ8NBL3 297 aa13.28□□□□□ -0.28
HDDC2-209ENST00000609477 MDS2Q8NDY4 140 aa13.28□□□□□ -0.28
HDDC2-209ENST00000609477 DNAJB8Q8NHS0 232 aa13.28□□□□□ -0.28
HDDC2-209ENST00000609477 CXorf21Q9HAI6 301 aa13.28□□□□□ -0.28
HDDC2-209ENST00000609477 TNFRSF12AQ9NP84 129 aa13.28□□□□□ -0.28
HDDC2-209ENST00000609477 KCNK9Q9NPC2 374 aa13.28□□□□□ -0.28
HDDC2-209ENST00000609477 C1orf109Q9NX04 203 aa13.28□□□□□ -0.28
HDDC2-209ENST00000609477 LRFN1Q9P244 771 aa13.28□□□□□ -0.28
HDDC2-209ENST00000609477 VPS4AQ9UN37 437 aa13.28□□□□□ -0.28
HDDC2-209ENST00000609477 DLGAP4Q9Y2H0 992 aa13.28□□□□□ -0.28
HDDC2-209ENST00000609477 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.28□□□□□ -0.28
HDDC2-209ENST00000609477 ZNF780BQ9Y6R6 833 aa13.28□□□□□ -0.28
HDDC2-209ENST00000609477 HELZ2Q9BYK8 2649 aaKnown RBP13.28□□□□□ -0.28
HDDC2-209ENST00000609477 FASNP49327 2511 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms