RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 HSPD1P10809 573 aaKnown RBP4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 MCF2P10911 925 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 SDHBP21912 280 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 CBLP22681 906 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 ACP1P24666 158 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 COL8A1P27658 744 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 IL12AP29459 219 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 CDKN2CP42773 168 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 F2RL1P55085 397 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 PDZK1IP1Q13113 114 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 SLC29A2Q14542 456 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 KCTD19Q17RG1 926 aaPredicted RBP4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 KLHL12Q53G59 568 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 KLHL26Q53HC5 615 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 MANEALQ5VSG8 457 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 KHDRBS2Q5VWX1 349 aaKnown RBP4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 PRAMEF7Q5VXH5 474 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 LIPMQ5VYY2 423 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 BSPRYQ5W0U4 402 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 CARD17Q5XLA6 110 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 DPY19L3Q6ZPD9 716 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 GADL1Q6ZQY3 521 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 C15orf39Q6ZRI6 1047 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 CENPVQ7Z7K6 275 aaPredicted RBP4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 SERINC5Q86VE9 423 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 TBC1D10CQ8IV04 446 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 ZNF595Q8IYB9 648 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 RBFAQ8N0V3 343 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 PDIK1LQ8N165 341 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 PARP8Q8N3A8 854 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 C12orf29Q8N999 325 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 BEND2Q8NDZ0 799 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 ABHD11Q8NFV4 315 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 OR9K2Q8NGE7 335 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 OR10T2Q8NGX3 314 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 PSMA8Q8TAA3 256 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 BPIFB1Q8TDL5 484 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 PAQR8Q8TEZ7 354 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 OSTF1Q92882 214 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 RFT1Q96AA3 541 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 MRGPRX4Q96LA9 322 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 PRRC1Q96M27 445 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 C7orf50Q9BRJ6 194 aaKnown RBP4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 POLDIP3Q9BY77 421 aaKnown RBP4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 MAGEF1Q9HAY2 307 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 FBXO8Q9NRD0 319 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 POT1Q9NUX5 634 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 CACNA2D2Q9NY47 1150 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 HSPB7Q9UBY9 170 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 GDF2Q9UK05 429 aaPredicted RBP4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 PSMD13Q9UNM6 376 aa4.78□□□□□ -1.64
SPTBN1-206ENST00000602898 LOC100289279A0A1B0GTE1 492 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 WNT9AO14904 365 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 KCNK2O95069 426 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 OAZ2O95190 189 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 NSA2O95478 260 aaKnown RBP4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 LY86O95711 162 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 TNNC2P02585 160 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 CSF1RP07333 972 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 SLURP2P0DP57 97 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 IL7P13232 177 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 ZNF182P17025 639 aaPredicted RBP4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 HNF1AP20823 631 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 MGAT1P26572 445 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 YWHAQP27348 245 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 PRDX5P30044 214 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 CAMPP49913 170 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 ITGA1P56199 1179 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 SLC3A1Q07837 685 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 PUDPQ08623 228 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 GRIK2Q13002 908 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 PDE7AQ13946 482 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 GRB7Q14451 532 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 KCNJ11Q14654 390 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 Q5BKY6 102 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 ZNF766Q5HY98 468 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 NCR3LG1Q68D85 454 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 ZFP1Q6P2D0 407 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 GAREM2Q75VX8 874 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 CARM1Q86X55 608 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 ZDHHC13Q8IUH4 622 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 MCATQ8IVS2 390 aaKnown RBP4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 CTAGE3PQ8IX95 158 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 NAGSQ8N159 534 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 PQLC1Q8N2U9 271 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 RAB2BQ8WUD1 216 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 FBLIM1Q8WUP2 373 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 PYDC1Q8WXC3 89 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 WBP2Q969T9 261 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 KLHL32Q96NJ5 620 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 QKIQ96PU8 341 aaKnown RBP eCLIP4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 NRSN2Q9GZP1 204 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 FZD8Q9H461 694 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 ZNF160Q9HCG1 818 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 KCNK9Q9NPC2 374 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 PLSCR3Q9NRY6 295 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 C19orf12Q9NSK7 152 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 PCDHB7Q9Y5E2 793 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 TAF1P21675 1872 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms