RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 ATP5F1P24539 256 aaPredicted RBP9.75□□□□□ -0.85
CCDC9-203ENST00000596938 MEOX1P50221 254 aa9.75□□□□□ -0.85
CCDC9-203ENST00000596938 PRKAA2P54646 552 aa9.75□□□□□ -0.85
CCDC9-203ENST00000596938 RASA2Q15283 850 aa9.75□□□□□ -0.85
CCDC9-203ENST00000596938 SPRED3Q2MJR0 410 aa9.75□□□□□ -0.85
CCDC9-203ENST00000596938 UNC50Q53HI1 259 aa9.75□□□□□ -0.85
CCDC9-203ENST00000596938 ZNF678Q5SXM1 525 aa9.75□□□□□ -0.85
CCDC9-203ENST00000596938 CCNYL2Q5T2Q4 361 aa9.75□□□□□ -0.85
CCDC9-203ENST00000596938 HIST2H2BCQ6DN03 193 aa9.75□□□□□ -0.85
CCDC9-203ENST00000596938 LETMD1Q6P1Q0 360 aa9.75□□□□□ -0.85
CCDC9-203ENST00000596938 OPN5Q6U736 354 aa9.75□□□□□ -0.85
CCDC9-203ENST00000596938 IL20RBQ6UXL0 311 aa9.75□□□□□ -0.85
CCDC9-203ENST00000596938 DGAT2L6Q6ZPD8 337 aa9.75□□□□□ -0.85
CCDC9-203ENST00000596938 SH2D5Q6ZV89 423 aa9.75□□□□□ -0.85
CCDC9-203ENST00000596938 RPS27LQ71UM5 84 aaKnown RBP9.75□□□□□ -0.85
CCDC9-203ENST00000596938 SLC22A9Q8IVM8 553 aa9.75□□□□□ -0.85
CCDC9-203ENST00000596938 CHERPQ8IWX8 916 aaKnown RBP9.75□□□□□ -0.85
CCDC9-203ENST00000596938 GHDCQ8N2G8 530 aa9.75□□□□□ -0.85
CCDC9-203ENST00000596938 SLC15A4Q8N697 577 aa9.75□□□□□ -0.85
CCDC9-203ENST00000596938 GOLM1Q8NBJ4 401 aa9.75□□□□□ -0.85
CCDC9-203ENST00000596938 LRRN4CLQ8ND94 238 aa9.75□□□□□ -0.85
CCDC9-203ENST00000596938 MZB1Q8WU39 189 aa9.75□□□□□ -0.85
CCDC9-203ENST00000596938 RIT1Q92963 219 aa9.75□□□□□ -0.85
CCDC9-203ENST00000596938 PPCSQ9HAB8 311 aa9.75□□□□□ -0.85
CCDC9-203ENST00000596938 FARSBQ9NSD9 589 aaKnown RBP9.75□□□□□ -0.85
CCDC9-203ENST00000596938 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.75□□□□□ -0.85
CCDC9-203ENST00000596938 SUCOQ9UBS9 1254 aaKnown RBP9.75□□□□□ -0.85
CCDC9-203ENST00000596938 TRPS1Q9UHF7 1281 aa9.75□□□□□ -0.85
CCDC9-203ENST00000596938 ZNF225Q9UK10 706 aa9.75□□□□□ -0.85
CCDC9-203ENST00000596938 CELSR2Q9HCU4 2923 aa9.75□□□□□ -0.85
CCDC9-203ENST00000596938 ARHGAP10A1A4S6 786 aa9.74□□□□□ -0.85
CCDC9-203ENST00000596938 GLOD5A6NK44 160 aa9.74□□□□□ -0.85
CCDC9-203ENST00000596938 OR6C76A6NM76 312 aa9.74□□□□□ -0.85
CCDC9-203ENST00000596938 HRKO00198 91 aa9.74□□□□□ -0.85
CCDC9-203ENST00000596938 OR10H2O60403 315 aa9.74□□□□□ -0.85
CCDC9-203ENST00000596938 ZNF354AO60765 605 aaPredicted RBP9.74□□□□□ -0.85
CCDC9-203ENST00000596938 PRKRAO75569 313 aaKnown RBP9.74□□□□□ -0.85
CCDC9-203ENST00000596938 SUPT7LO94864 414 aa9.74□□□□□ -0.85
CCDC9-203ENST00000596938 AIFM1O95831 613 aa9.74□□□□□ -0.85
CCDC9-203ENST00000596938 PDYNP01213 254 aa9.74□□□□□ -0.85
CCDC9-203ENST00000596938 GBAP04062 536 aa9.74□□□□□ -0.85
CCDC9-203ENST00000596938 PYGBP11216 843 aa9.74□□□□□ -0.85
CCDC9-203ENST00000596938 HSD3B1P14060 373 aa9.74□□□□□ -0.85
CCDC9-203ENST00000596938 TSPAN8P19075 237 aa9.74□□□□□ -0.85
CCDC9-203ENST00000596938 CNR1P21554 472 aa9.74□□□□□ -0.85
CCDC9-203ENST00000596938 HSD3B2P26439 372 aa9.74□□□□□ -0.85
CCDC9-203ENST00000596938 TNFRSF8P28908 595 aa9.74□□□□□ -0.85
CCDC9-203ENST00000596938 SOX3P41225 446 aa9.74□□□□□ -0.85
CCDC9-203ENST00000596938 TBL3Q12788 808 aaKnown RBP9.74□□□□□ -0.85
CCDC9-203ENST00000596938 ART3Q13508 389 aa9.74□□□□□ -0.85
CCDC9-203ENST00000596938 C3AR1Q16581 482 aa9.74□□□□□ -0.85
CCDC9-203ENST00000596938 ZNF791Q3KP31 576 aaPredicted RBP9.74□□□□□ -0.85
CCDC9-203ENST00000596938 SGO1Q5FBB7 561 aa9.74□□□□□ -0.85
CCDC9-203ENST00000596938 NDUFAF5Q5TEU4 345 aa9.74□□□□□ -0.85
CCDC9-203ENST00000596938 OR52E8Q6IFG1 317 aa9.74□□□□□ -0.85
CCDC9-203ENST00000596938 RPTNQ6XPR3 784 aa9.74□□□□□ -0.85
CCDC9-203ENST00000596938 RTL4Q6ZR62 310 aa9.74□□□□□ -0.85
CCDC9-203ENST00000596938 RGS9BPQ6ZS82 235 aa9.74□□□□□ -0.85
CCDC9-203ENST00000596938 TDRPQ86YL5 185 aa9.74□□□□□ -0.85
CCDC9-203ENST00000596938 C9orf40Q8IXQ3 194 aa9.74□□□□□ -0.85
CCDC9-203ENST00000596938 SLC34A3Q8N130 599 aa9.74□□□□□ -0.85
CCDC9-203ENST00000596938 PSD4Q8NDX1 1056 aa9.74□□□□□ -0.85
CCDC9-203ENST00000596938 OR4K14Q8NGD5 310 aa9.74□□□□□ -0.85
CCDC9-203ENST00000596938 SELENOMQ8WWX9 145 aa9.74□□□□□ -0.85
CCDC9-203ENST00000596938 UCN3Q969E3 161 aa9.74□□□□□ -0.85
CCDC9-203ENST00000596938 CCDC126Q96EE4 140 aa9.74□□□□□ -0.85
CCDC9-203ENST00000596938 L3HYPDHQ96EM0 354 aa9.74□□□□□ -0.85
CCDC9-203ENST00000596938 MAGED4Q96JG8 741 aa9.74□□□□□ -0.85
CCDC9-203ENST00000596938 ZNF382Q96SR6 550 aa9.74□□□□□ -0.85
CCDC9-203ENST00000596938 MRPL1Q9BYD6 325 aaKnown RBP9.74□□□□□ -0.85
CCDC9-203ENST00000596938 TSPAN10Q9H1Z9 355 aaPredicted RBP9.74□□□□□ -0.85
CCDC9-203ENST00000596938 CXorf21Q9HAI6 301 aa9.74□□□□□ -0.85
CCDC9-203ENST00000596938 DEPPQ9NTK1 212 aa9.74□□□□□ -0.85
CCDC9-203ENST00000596938 VPS29Q9UBQ0 182 aa9.74□□□□□ -0.85
CCDC9-203ENST00000596938 SLC12A4Q9UP95 1085 aa9.74□□□□□ -0.85
CCDC9-203ENST00000596938 STK38LQ9Y2H1 464 aa9.74□□□□□ -0.85
CCDC9-203ENST00000596938 SPTBN1Q01082 2364 aaKnown RBP9.74□□□□□ -0.85
CCDC9-203ENST00000596938 A0A1W2PPM1 405 aa9.73□□□□□ -0.85
CCDC9-203ENST00000596938 C1orf226A1L170 272 aa9.73□□□□□ -0.85
CCDC9-203ENST00000596938 GOLGA8RI6L899 631 aa9.73□□□□□ -0.85
CCDC9-203ENST00000596938 MANBAO00462 879 aa9.73□□□□□ -0.85
CCDC9-203ENST00000596938 TFECO14948 347 aaPredicted RBP9.73□□□□□ -0.85
CCDC9-203ENST00000596938 ULK1O75385 1050 aa9.73□□□□□ -0.85
CCDC9-203ENST00000596938 OR4F21O95013 312 aa9.73□□□□□ -0.85
CCDC9-203ENST00000596938 KRT6AP02538 564 aa9.73□□□□□ -0.85
CCDC9-203ENST00000596938 KRT6BP04259 564 aa9.73□□□□□ -0.85
CCDC9-203ENST00000596938 AGAP20933 346 aa9.73□□□□□ -0.85
CCDC9-203ENST00000596938 COL8A1P27658 744 aa9.73□□□□□ -0.85
CCDC9-203ENST00000596938 PIK3R1P27986 724 aa9.73□□□□□ -0.85
CCDC9-203ENST00000596938 CCT5P48643 541 aa9.73□□□□□ -0.85
CCDC9-203ENST00000596938 KRT6CP48668 564 aa9.73□□□□□ -0.85
CCDC9-203ENST00000596938 XKP51811 444 aa9.73□□□□□ -0.85
CCDC9-203ENST00000596938 MAPK12P53778 367 aa9.73□□□□□ -0.85
CCDC9-203ENST00000596938 PKNOX1P55347 436 aa9.73□□□□□ -0.85
CCDC9-203ENST00000596938 SLC37A1P57057 533 aa9.73□□□□□ -0.85
CCDC9-203ENST00000596938 NAA20P61599 178 aa9.73□□□□□ -0.85
CCDC9-203ENST00000596938 TRA2BP62995 288 aaKnown RBP9.73□□□□□ -0.85
CCDC9-203ENST00000596938 GALNT1Q10472 559 aaPredicted RBP9.73□□□□□ -0.85
CCDC9-203ENST00000596938 ASPHQ12797 758 aa9.73□□□□□ -0.85
CCDC9-203ENST00000596938 ZNF267Q14586 743 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms