RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 AICDAQ9GZX7 198 aa12.62□□□□□ -0.39
SHKBP1-208ENST00000595726 POPDC3Q9HBV1 291 aa12.62□□□□□ -0.39
SHKBP1-208ENST00000595726 ARL15Q9NXU5 204 aa12.62□□□□□ -0.39
SHKBP1-208ENST00000595726 GALNT8Q9NY28 637 aa12.62□□□□□ -0.39
SHKBP1-208ENST00000595726 MMACHCQ9Y4U1 282 aa12.62□□□□□ -0.39
SHKBP1-208ENST00000595726 PCDHGB3Q9Y5G1 929 aa12.62□□□□□ -0.39
SHKBP1-208ENST00000595726 A0A0G2JN53 185 aa12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 TRBC2A0A5B9 178 aa12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 PABPN1LA6NDY0 278 aaKnown RBP12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 NPEPPSL1A6NEC2 478 aa12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 LRRC3CA6NJW4 275 aa12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 CDC7O00311 574 aa12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 LRATO95237 230 aa12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 WISP3O95389 354 aaPredicted RBP12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 GUCA1CO95843 209 aa12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 SMIM10L1P0DMW3 83 aa12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 GP5P40197 560 aa12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 MAGEA4P43358 317 aa12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 KCNJ2P63252 427 aa12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 BTN3A2P78410 334 aa12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 RGS1Q08116 209 aa12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 FOXF2Q12947 444 aa12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 SLC13A2Q13183 592 aa12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 DUSP8Q13202 625 aa12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 ACKR1Q16570 336 aa12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 NSUN5P2Q63ZY6 315 aa12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 LRRC25Q8N386 305 aaPredicted RBP12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 LIX1Q8N485 282 aa12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 ANKRD53Q8N9V6 530 aa12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 ABHD11Q8NFV4 315 aa12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 OR56A3Q8NH54 315 aa12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 PTPMT1Q8WUK0 201 aaPredicted RBP12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 ANKRD7Q92527 254 aa12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 ISL2Q96A47 359 aa12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 FBXL8Q96CD0 374 aa12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 SMIM10Q96HG1 83 aa12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 JSRP1Q96MG2 331 aaPredicted RBP12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 TRIB1Q96RU8 372 aa12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 GPR22Q99680 433 aa12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 TRIM54Q9BYV2 358 aa12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 CAB39LQ9H9S4 337 aa12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 PROK2Q9HC23 129 aa12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 ZFP64Q9NPA5 681 aa12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 ACKR4Q9NPB9 350 aa12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 PRTFDC1Q9NRG1 225 aa12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 ZDHHC18Q9NUE0 388 aa12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 TXNDC16Q9P2K2 825 aa12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 ZFP69BQ9UJL9 534 aa12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 MTO1Q9Y2Z2 717 aaKnown RBP12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 CLCA3PQ9Y6N3 262 aa12.61□□□□□ -0.39
SHKBP1-208ENST00000595726 F12P00748 615 aaPredicted RBP12.6□□□□□ -0.39
SHKBP1-208ENST00000595726 IFNA16P05015 189 aa12.6□□□□□ -0.39
SHKBP1-208ENST00000595726 STX2P32856 288 aa12.6□□□□□ -0.39
SHKBP1-208ENST00000595726 SCTRP47872 440 aa12.6□□□□□ -0.39
SHKBP1-208ENST00000595726 RNF4P78317 190 aa12.6□□□□□ -0.39
SHKBP1-208ENST00000595726 POU4F1Q01851 419 aa12.6□□□□□ -0.39
SHKBP1-208ENST00000595726 GUCY2DQ02846 1103 aa12.6□□□□□ -0.39
SHKBP1-208ENST00000595726 CRYZQ08257 329 aaKnown RBP12.6□□□□□ -0.39
SHKBP1-208ENST00000595726 CAPRIN1Q14444 709 aaKnown RBP12.6□□□□□ -0.39
SHKBP1-208ENST00000595726 KBTBD12Q3ZCT8 623 aa12.6□□□□□ -0.39
SHKBP1-208ENST00000595726 TOR1AIP1Q5JTV8 583 aa12.6□□□□□ -0.39
SHKBP1-208ENST00000595726 NIPAL1Q6NVV3 410 aa12.6□□□□□ -0.39
SHKBP1-208ENST00000595726 OPN5Q6U736 354 aa12.6□□□□□ -0.39
SHKBP1-208ENST00000595726 MMGT1Q8N4V1 131 aa12.6□□□□□ -0.39
SHKBP1-208ENST00000595726 FAM47BQ8NA70 645 aa12.6□□□□□ -0.39
SHKBP1-208ENST00000595726 NOA1Q8NC60 698 aaKnown RBP12.6□□□□□ -0.39
SHKBP1-208ENST00000595726 ATL1Q8WXF7 558 aa12.6□□□□□ -0.39
SHKBP1-208ENST00000595726 HSPBAP1Q96EW2 488 aa12.6□□□□□ -0.39
SHKBP1-208ENST00000595726 OR4K3Q96R72 315 aa12.6□□□□□ -0.39
SHKBP1-208ENST00000595726 PIGQQ9BRB3 760 aa12.6□□□□□ -0.39
SHKBP1-208ENST00000595726 OR8D2Q9GZM6 311 aa12.6□□□□□ -0.39
SHKBP1-208ENST00000595726 CLK4Q9HAZ1 481 aaKnown RBP12.6□□□□□ -0.39
SHKBP1-208ENST00000595726 ADAP2Q9NPF8 381 aa12.6□□□□□ -0.39
SHKBP1-208ENST00000595726 CAMK2AQ9UQM7 478 aa12.6□□□□□ -0.39
SHKBP1-208ENST00000595726 OARD1Q9Y530 152 aa12.6□□□□□ -0.39
SHKBP1-208ENST00000595726 KIF2AO00139 706 aaPredicted RBP12.59□□□□□ -0.39
SHKBP1-208ENST00000595726 PHF1O43189 567 aaPredicted RBP12.59□□□□□ -0.39
SHKBP1-208ENST00000595726 WIPF1O43516 503 aa12.59□□□□□ -0.39
SHKBP1-208ENST00000595726 IFNA2P01563 188 aa12.59□□□□□ -0.39
SHKBP1-208ENST00000595726 OPRM1P35372 400 aa12.59□□□□□ -0.39
SHKBP1-208ENST00000595726 PTH2RP49190 550 aa12.59□□□□□ -0.39
SHKBP1-208ENST00000595726 SLC12A2P55011 1212 aa12.59□□□□□ -0.39
SHKBP1-208ENST00000595726 CDKL1Q00532 357 aa12.59□□□□□ -0.39
SHKBP1-208ENST00000595726 ASPHQ12797 758 aa12.59□□□□□ -0.39
SHKBP1-208ENST00000595726 TNK1Q13470 666 aa12.59□□□□□ -0.39
SHKBP1-208ENST00000595726 EFTUD2Q15029 972 aaKnown RBP eCLIP12.59□□□□□ -0.39
SHKBP1-208ENST00000595726 TSNQ15631 228 aaKnown RBP12.59□□□□□ -0.39
SHKBP1-208ENST00000595726 ELAVL1Q15717 326 aaKnown RBP12.59□□□□□ -0.39
SHKBP1-208ENST00000595726 ZKSCAN8Q15776 578 aaPredicted RBP12.59□□□□□ -0.39
SHKBP1-208ENST00000595726 ZNF791Q3KP31 576 aaPredicted RBP12.59□□□□□ -0.39
SHKBP1-208ENST00000595726 SLC22A10Q63ZE4 541 aa12.59□□□□□ -0.39
SHKBP1-208ENST00000595726 PLXDC2Q6UX71 529 aa12.59□□□□□ -0.39
SHKBP1-208ENST00000595726 ADAMTSL2Q86TH1 951 aa12.59□□□□□ -0.39
SHKBP1-208ENST00000595726 CTAGE3PQ8IX95 158 aa12.59□□□□□ -0.39
SHKBP1-208ENST00000595726 TMEM132CQ8N3T6 1108 aa12.59□□□□□ -0.39
SHKBP1-208ENST00000595726 PPM1NQ8N819 430 aa12.59□□□□□ -0.39
SHKBP1-208ENST00000595726 C9orf106Q8NAJ2 232 aa12.59□□□□□ -0.39
SHKBP1-208ENST00000595726 FBF1Q8TES7 1133 aa12.59□□□□□ -0.39
SHKBP1-208ENST00000595726 HAUS8Q9BT25 410 aa12.59□□□□□ -0.39
SHKBP1-208ENST00000595726 SH2D2AQ9NP31 389 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms