RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 ADH7P40394 386 aa12.64□□□□□ -0.39
HDAC5-208ENST00000588419 BUD31P41223 144 aaPredicted RBP12.64□□□□□ -0.39
HDAC5-208ENST00000588419 HNRNPH2P55795 449 aaKnown RBP12.64□□□□□ -0.39
HDAC5-208ENST00000588419 RPS13P62277 151 aaKnown RBP12.64□□□□□ -0.39
HDAC5-208ENST00000588419 PHEXP78562 749 aa12.64□□□□□ -0.39
HDAC5-208ENST00000588419 FOXO1Q12778 655 aa12.64□□□□□ -0.39
HDAC5-208ENST00000588419 ILF2Q12905 390 aaKnown RBP12.64□□□□□ -0.39
HDAC5-208ENST00000588419 DLG1Q12959 904 aa12.64□□□□□ -0.39
HDAC5-208ENST00000588419 ZNF267Q14586 743 aaPredicted RBP12.64□□□□□ -0.39
HDAC5-208ENST00000588419 ZKSCAN8Q15776 578 aaPredicted RBP12.64□□□□□ -0.39
HDAC5-208ENST00000588419 TBCCQ15814 346 aa12.64□□□□□ -0.39
HDAC5-208ENST00000588419 KBTBD12Q3ZCT8 623 aa12.64□□□□□ -0.39
HDAC5-208ENST00000588419 PIGGQ5H8A4 983 aa12.64□□□□□ -0.39
HDAC5-208ENST00000588419 SLC22A10Q63ZE4 541 aa12.64□□□□□ -0.39
HDAC5-208ENST00000588419 RTL6Q6ICC9 239 aa12.64□□□□□ -0.39
HDAC5-208ENST00000588419 GRHL2Q6ISB3 625 aa12.64□□□□□ -0.39
HDAC5-208ENST00000588419 SPNS3Q6ZMD2 512 aa12.64□□□□□ -0.39
HDAC5-208ENST00000588419 RNF111Q6ZNA4 994 aa12.64□□□□□ -0.39
HDAC5-208ENST00000588419 OR10G3Q8NGC4 313 aa12.64□□□□□ -0.39
HDAC5-208ENST00000588419 HUS1BQ8NHY5 278 aa12.64□□□□□ -0.39
HDAC5-208ENST00000588419 RGMAQ96B86 450 aa12.64□□□□□ -0.39
HDAC5-208ENST00000588419 SPACA9Q96E40 222 aaPredicted RBP12.64□□□□□ -0.39
HDAC5-208ENST00000588419 ZNF703Q9H7S9 590 aaPredicted RBP12.64□□□□□ -0.39
HDAC5-208ENST00000588419 GRPEL1Q9HAV7 217 aa12.64□□□□□ -0.39
HDAC5-208ENST00000588419 KCNN3Q9UGI6 736 aa12.64□□□□□ -0.39
HDAC5-208ENST00000588419 PHF11Q9UIL8 331 aa12.64□□□□□ -0.39
HDAC5-208ENST00000588419 TACC2O95359 2948 aa12.64□□□□□ -0.39
HDAC5-208ENST00000588419 C15orf38-AP3S2A0A0A6YYH1 394 aa12.63□□□□□ -0.39
HDAC5-208ENST00000588419 PLPP1O14494 284 aa12.63□□□□□ -0.39
HDAC5-208ENST00000588419 RAD51CO43502 376 aa12.63□□□□□ -0.39
HDAC5-208ENST00000588419 KERAO60938 352 aa12.63□□□□□ -0.39
HDAC5-208ENST00000588419 SCELO95171 688 aa12.63□□□□□ -0.39
HDAC5-208ENST00000588419 LTA4HP09960 611 aaKnown RBP12.63□□□□□ -0.39
HDAC5-208ENST00000588419 RFPL3SP0C7P2 107 aa12.63□□□□□ -0.39
HDAC5-208ENST00000588419 SLC35E2BP0CK96 405 aa12.63□□□□□ -0.39
HDAC5-208ENST00000588419 GFAPP14136 432 aa12.63□□□□□ -0.39
HDAC5-208ENST00000588419 CD1EP15812 388 aa12.63□□□□□ -0.39
HDAC5-208ENST00000588419 EPB42P16452 691 aa12.63□□□□□ -0.39
HDAC5-208ENST00000588419 GDF1P27539 372 aa12.63□□□□□ -0.39
HDAC5-208ENST00000588419 SERPINB1P30740 379 aa12.63□□□□□ -0.39
HDAC5-208ENST00000588419 TLX1P31314 330 aaPredicted RBP12.63□□□□□ -0.39
HDAC5-208ENST00000588419 UQCRC1P31930 480 aa12.63□□□□□ -0.39
HDAC5-208ENST00000588419 WNT3P56703 355 aa12.63□□□□□ -0.39
HDAC5-208ENST00000588419 GPX6P59796 221 aa12.63□□□□□ -0.39
HDAC5-208ENST00000588419 IRF9Q00978 393 aa12.63□□□□□ -0.39
HDAC5-208ENST00000588419 MPEG1Q2M385 716 aa12.63□□□□□ -0.39
HDAC5-208ENST00000588419 GRTP1Q5TC63 336 aa12.63□□□□□ -0.39
HDAC5-208ENST00000588419 CYP20A1Q6UW02 462 aa12.63□□□□□ -0.39
HDAC5-208ENST00000588419 GPR180Q86V85 440 aa12.63□□□□□ -0.39
HDAC5-208ENST00000588419 LIX1LQ8IVB5 337 aa12.63□□□□□ -0.39
HDAC5-208ENST00000588419 LAS2Q8IYD9 372 aa12.63□□□□□ -0.39
HDAC5-208ENST00000588419 NUBPLQ8TB37 319 aa12.63□□□□□ -0.39
HDAC5-208ENST00000588419 KCTD4Q8WVF5 259 aa12.63□□□□□ -0.39
HDAC5-208ENST00000588419 NXNL1Q96CM4 212 aa12.63□□□□□ -0.39
HDAC5-208ENST00000588419 UBXN10Q96LJ8 280 aa12.63□□□□□ -0.39
HDAC5-208ENST00000588419 ATOH8Q96SQ7 321 aa12.63□□□□□ -0.39
HDAC5-208ENST00000588419 DOHHQ9BU89 302 aa12.63□□□□□ -0.39
HDAC5-208ENST00000588419 ACTR8Q9H981 624 aa12.63□□□□□ -0.39
HDAC5-208ENST00000588419 NMRAL1Q9HBL8 299 aa12.63□□□□□ -0.39
HDAC5-208ENST00000588419 DMRT3Q9NQL9 472 aa12.63□□□□□ -0.39
HDAC5-208ENST00000588419 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.63□□□□□ -0.399e-8■■■□□ 19.1
HDAC5-208ENST00000588419 DNAJB12Q9NXW2 375 aaKnown RBP12.63□□□□□ -0.39
HDAC5-208ENST00000588419 WHRNQ9P202 907 aa12.63□□□□□ -0.39
HDAC5-208ENST00000588419 DOCK7Q96N67 2140 aa12.62□□□□□ -0.39
HDAC5-208ENST00000588419 HIVEP1P15822 2718 aa12.62□□□□□ -0.39
HDAC5-208ENST00000588419 A0A1B0GVC2 190 aa12.62□□□□□ -0.39
HDAC5-208ENST00000588419 FAM187AA6NFU0 413 aa12.62□□□□□ -0.39
HDAC5-208ENST00000588419 LRRC14BA6NHZ5 514 aa12.62□□□□□ -0.39
HDAC5-208ENST00000588419 EIF3HO15372 352 aaKnown RBP eCLIP12.62□□□□□ -0.39
HDAC5-208ENST00000588419 SUSD5O60279 629 aa12.62□□□□□ -0.39
HDAC5-208ENST00000588419 GBAP04062 536 aa12.62□□□□□ -0.39
HDAC5-208ENST00000588419 NR2F6P10588 404 aa12.62□□□□□ -0.39
HDAC5-208ENST00000588419 DNAJA1P31689 397 aaKnown RBP12.62□□□□□ -0.39
HDAC5-208ENST00000588419 PIK3CGP48736 1102 aa12.62□□□□□ -0.39
HDAC5-208ENST00000588419 PLTPP55058 493 aa12.62□□□□□ -0.39
HDAC5-208ENST00000588419 IGLV3-21P80748 117 aaPredicted RBP12.62□□□□□ -0.39
HDAC5-208ENST00000588419 TOMM20Q15388 145 aa12.62□□□□□ -0.39
HDAC5-208ENST00000588419 UAP1Q16222 522 aaPredicted RBP12.62□□□□□ -0.39
HDAC5-208ENST00000588419 ZNF791Q3KP31 576 aaPredicted RBP12.62□□□□□ -0.39
HDAC5-208ENST00000588419 DEPDC1Q5TB30 811 aa12.62□□□□□ -0.39
HDAC5-208ENST00000588419 TMEM64Q6YI46 380 aa12.62□□□□□ -0.39
HDAC5-208ENST00000588419 ISCA2Q86U28 154 aa12.62□□□□□ -0.39
HDAC5-208ENST00000588419 FBXW8Q8N3Y1 598 aa12.62□□□□□ -0.39
HDAC5-208ENST00000588419 MYRIPQ8NFW9 859 aa12.62□□□□□ -0.39
HDAC5-208ENST00000588419 FBF1Q8TES7 1133 aa12.62□□□□□ -0.39
HDAC5-208ENST00000588419 UBTD2Q8WUN7 234 aa12.62□□□□□ -0.39
HDAC5-208ENST00000588419 FBXL20Q96IG2 436 aa12.62□□□□□ -0.39
HDAC5-208ENST00000588419 ZNF597Q96LX8 424 aa12.62□□□□□ -0.39
HDAC5-208ENST00000588419 GPATCH1Q9BRR8 931 aaKnown RBP12.62□□□□□ -0.39
HDAC5-208ENST00000588419 ERP44Q9BS26 406 aa12.62□□□□□ -0.39
HDAC5-208ENST00000588419 POLDIP3Q9BY77 421 aaKnown RBP12.62□□□□□ -0.39
HDAC5-208ENST00000588419 WWTR1Q9GZV5 400 aa12.62□□□□□ -0.39
HDAC5-208ENST00000588419 ZFP64Q9NPA5 681 aa12.62□□□□□ -0.39
HDAC5-208ENST00000588419 IGSF5Q9NSI5 407 aa12.62□□□□□ -0.39
HDAC5-208ENST00000588419 MS4A12Q9NXJ0 267 aa12.62□□□□□ -0.39
HDAC5-208ENST00000588419 CPSF2Q9P2I0 782 aaKnown RBP12.62□□□□□ -0.39
HDAC5-208ENST00000588419 B4GALT7Q9UBV7 327 aa12.62□□□□□ -0.39
HDAC5-208ENST00000588419 L3MBTL1Q9Y468 752 aa12.62□□□□□ -0.39
HDAC5-208ENST00000588419 LRRC3CA6NJW4 275 aa12.61□□□□□ -0.39
HDAC5-208ENST00000588419 WASHC1A8K0Z3 465 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms