RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 DDAH2O95865 285 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 BPGMP07738 259 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 DRD2P14416 443 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 CD46P15529 392 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 CHN1P15882 459 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 ETV4P43268 484 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 CYB561P49447 251 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 HTR6P50406 440 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 HLCSP50747 726 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 FOXA1P55317 472 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 ID2Q02363 134 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 OC90Q02509 493 aaPredicted RBP9.41□□□□□ -0.9
TPM4-207ENST00000588032 TUBA3CQ13748 450 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 HEPACAMQ14CZ8 416 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 IGFBP7Q16270 282 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 IMPG1Q17R60 797 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 SPRED3Q2MJR0 410 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 SPDYAQ5MJ70 313 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 FCRLBQ6BAA4 426 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 SLC48A1Q6P1K1 146 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 TUBA3EQ6PEY2 450 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 NUDCD3Q8IVD9 361 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 GPALPP1Q8IXQ4 340 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 SAMD14Q8IZD0 417 aaPredicted RBP9.41□□□□□ -0.9
TPM4-207ENST00000588032 CLYBLQ8N0X4 340 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 AMER2Q8N7J2 671 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 DNAJB8Q8NHS0 232 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 SLC2A12Q8TD20 617 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 ZNF721Q8TF20 911 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 RIT1Q92963 219 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 C11orf24Q96F05 449 aaPredicted RBP9.41□□□□□ -0.9
TPM4-207ENST00000588032 SENP5Q96HI0 755 aaPredicted RBP9.41□□□□□ -0.9
TPM4-207ENST00000588032 FBXL20Q96IG2 436 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 PKNOX2Q96KN3 472 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 KCNA7Q96RP8 456 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 NPAS2Q99743 824 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 OR8D2Q9GZM6 311 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 TEX10Q9NXF1 929 aaPredicted RBP9.41□□□□□ -0.9
TPM4-207ENST00000588032 MAP10Q9P2G4 905 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 MYOTQ9UBF9 498 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 YARS2Q9Y2Z4 477 aaKnown RBP9.41□□□□□ -0.9
TPM4-207ENST00000588032 DOCK10Q96BY6 2186 aa9.41□□□□□ -0.9
TPM4-207ENST00000588032 PIEZO2Q9H5I5 2752 aa9.4□□□□□ -0.9
TPM4-207ENST00000588032 SCN2AQ99250 2005 aa9.4□□□□□ -0.9
TPM4-207ENST00000588032 MYOCOSA0A1B0GUC4 107 aa9.4□□□□□ -0.9
TPM4-207ENST00000588032 OR6C76A6NM76 312 aa9.4□□□□□ -0.9
TPM4-207ENST00000588032 RGS14O43566 566 aa9.4□□□□□ -0.9
TPM4-207ENST00000588032 PCDH7O60245 1069 aa9.4□□□□□ -0.9
TPM4-207ENST00000588032 PRKRAO75569 313 aaKnown RBP9.4□□□□□ -0.9
TPM4-207ENST00000588032 ITGA10O75578 1167 aa9.4□□□□□ -0.9
TPM4-207ENST00000588032 RASAL1O95294 804 aa9.4□□□□□ -0.9
TPM4-207ENST00000588032 CRYABP02511 175 aaKnown RBP9.4□□□□□ -0.9
TPM4-207ENST00000588032 IGKV3-11P04433 115 aa9.4□□□□□ -0.9
TPM4-207ENST00000588032 ANXA4P09525 319 aaPredicted RBP9.4□□□□□ -0.9
TPM4-207ENST00000588032 NEFHP12036 1026 aa9.4□□□□□ -0.9
TPM4-207ENST00000588032 CREB1P16220 341 aa9.4□□□□□ -0.9
TPM4-207ENST00000588032 PORP16435 677 aaPredicted RBP9.4□□□□□ -0.9
TPM4-207ENST00000588032 CSNK2A2P19784 350 aaPredicted RBP9.4□□□□□ -0.9
TPM4-207ENST00000588032 PRPH2P23942 346 aa9.4□□□□□ -0.9
TPM4-207ENST00000588032 SERPINB3P29508 390 aa9.4□□□□□ -0.9
TPM4-207ENST00000588032 TIA1P31483 386 aaKnown RBP eCLIP9.4□□□□□ -0.91e-15■■■■■ 28.7
TPM4-207ENST00000588032 XKP51811 444 aa9.4□□□□□ -0.9
TPM4-207ENST00000588032 RNF4P78317 190 aa9.4□□□□□ -0.9
TPM4-207ENST00000588032 HMGCS1Q01581 520 aa9.4□□□□□ -0.9
TPM4-207ENST00000588032 OR1C1Q15619 314 aa9.4□□□□□ -0.9
TPM4-207ENST00000588032 MPEG1Q2M385 716 aa9.4□□□□□ -0.9
TPM4-207ENST00000588032 ARL13AQ5H913 290 aaPredicted RBP9.4□□□□□ -0.9
TPM4-207ENST00000588032 ZNF766Q5HY98 468 aa9.4□□□□□ -0.9
TPM4-207ENST00000588032 C6orf163Q5TEZ5 329 aa9.4□□□□□ -0.9
TPM4-207ENST00000588032 FAM180AQ6UWF9 173 aa9.4□□□□□ -0.9
TPM4-207ENST00000588032 KIRREL3Q8IZU9 778 aa9.4□□□□□ -0.9
TPM4-207ENST00000588032 TMEM156Q8N614 296 aa9.4□□□□□ -0.9
TPM4-207ENST00000588032 BCORP1Q8N888 145 aa9.4□□□□□ -0.9
TPM4-207ENST00000588032 TMEM178AQ8NBL3 297 aa9.4□□□□□ -0.9
TPM4-207ENST00000588032 FAM98AQ8NCA5 519 aaKnown RBP9.4□□□□□ -0.9
TPM4-207ENST00000588032 MDS2Q8NDY4 140 aa9.4□□□□□ -0.9
TPM4-207ENST00000588032 OR6Y1Q8NGX8 325 aa9.4□□□□□ -0.9
TPM4-207ENST00000588032 PPP1R14CQ8TAE6 165 aa9.4□□□□□ -0.9
TPM4-207ENST00000588032 NUBPLQ8TB37 319 aa9.4□□□□□ -0.9
TPM4-207ENST00000588032 FAR1Q8WVX9 515 aa9.4□□□□□ -0.9
TPM4-207ENST00000588032 TMEM125Q96AQ2 219 aa9.4□□□□□ -0.9
TPM4-207ENST00000588032 PPWD1Q96BP3 646 aaKnown RBP9.4□□□□□ -0.9
TPM4-207ENST00000588032 APIPQ96GX9 242 aa9.4□□□□□ -0.9
TPM4-207ENST00000588032 C5orf34Q96MH7 638 aa9.4□□□□□ -0.9
TPM4-207ENST00000588032 CCT7Q99832 543 aa9.4□□□□□ -0.9
TPM4-207ENST00000588032 MECRQ9BV79 373 aa9.4□□□□□ -0.9
TPM4-207ENST00000588032 CLMPQ9H6B4 373 aa9.4□□□□□ -0.9
TPM4-207ENST00000588032 PFDN4Q9NQP4 134 aa9.4□□□□□ -0.9
TPM4-207ENST00000588032 ASF1BQ9NVP2 202 aa9.4□□□□□ -0.9
TPM4-207ENST00000588032 EHD3Q9NZN3 535 aa9.4□□□□□ -0.9
TPM4-207ENST00000588032 LRFN1Q9P244 771 aa9.4□□□□□ -0.9
TPM4-207ENST00000588032 ZNF223Q9UK11 482 aaPredicted RBP9.4□□□□□ -0.9
TPM4-207ENST00000588032 CES1P1Q9UKY3 287 aa9.4□□□□□ -0.9
TPM4-207ENST00000588032 TRAF6Q9Y4K3 522 aa9.4□□□□□ -0.9
TPM4-207ENST00000588032 ZNF780BQ9Y6R6 833 aa9.4□□□□□ -0.9
TPM4-207ENST00000588032 ATMQ13315 3056 aa9.39□□□□□ -0.91
TPM4-207ENST00000588032 WASHC1A8K0Z3 465 aa9.39□□□□□ -0.91
TPM4-207ENST00000588032 SNPHO15079 494 aa9.39□□□□□ -0.91
TPM4-207ENST00000588032 MAN1A2O60476 641 aa9.39□□□□□ -0.91
TPM4-207ENST00000588032 SEC22BO75396 215 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms