RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 LANCL3Q6ZV70 420 aa12.77□□□□□ -0.37
VMP1-203ENST00000586245 CPEB2Q7Z5Q1 589 aaKnown RBP12.77□□□□□ -0.37
VMP1-203ENST00000586245 RIMKLAQ8IXN7 391 aa12.77□□□□□ -0.37
VMP1-203ENST00000586245 KRTCAP2Q8N6L1 136 aa12.77□□□□□ -0.37
VMP1-203ENST00000586245 NATD1Q8N6N6 113 aa12.77□□□□□ -0.37
VMP1-203ENST00000586245 ZNF764Q96H86 408 aaPredicted RBP12.77□□□□□ -0.37
VMP1-203ENST00000586245 BBS4Q96RK4 519 aa12.77□□□□□ -0.37
VMP1-203ENST00000586245 CCT8L2Q96SF2 557 aa12.77□□□□□ -0.37
VMP1-203ENST00000586245 SDR39U1Q9NRG7 319 aaPredicted RBP12.77□□□□□ -0.37
VMP1-203ENST00000586245 PNO1Q9NRX1 252 aaKnown RBP12.77□□□□□ -0.37
VMP1-203ENST00000586245 TAS2R7Q9NYW3 318 aa12.77□□□□□ -0.37
VMP1-203ENST00000586245 ZIM2Q9NZV7 527 aa12.77□□□□□ -0.37
VMP1-203ENST00000586245 HS3ST3B1Q9Y662 390 aa12.77□□□□□ -0.37
VMP1-203ENST00000586245 COPG1Q9Y678 874 aaKnown RBP12.77□□□□□ -0.37
VMP1-203ENST00000586245 LOC102723996A0A087X1L8 192 aa12.76□□□□□ -0.37
VMP1-203ENST00000586245 A8MUA0 341 aa12.76□□□□□ -0.37
VMP1-203ENST00000586245 TGFBR3LH3BV60 316 aa12.76□□□□□ -0.37
VMP1-203ENST00000586245 SOCS6O14544 535 aa12.76□□□□□ -0.37
VMP1-203ENST00000586245 PDPK1O15530 556 aa12.76□□□□□ -0.37
VMP1-203ENST00000586245 EFSO43281 561 aa12.76□□□□□ -0.37
VMP1-203ENST00000586245 DYRK3O43781 588 aa12.76□□□□□ -0.37
VMP1-203ENST00000586245 SLC35E2P0CK97 266 aa12.76□□□□□ -0.37
VMP1-203ENST00000586245 PRKAR1AP10644 381 aa12.76□□□□□ -0.37
VMP1-203ENST00000586245 CPMP14384 443 aa12.76□□□□□ -0.37
VMP1-203ENST00000586245 TNNI3P19429 210 aa12.76□□□□□ -0.37
VMP1-203ENST00000586245 CSNK2A2P19784 350 aaPredicted RBP12.76□□□□□ -0.37
VMP1-203ENST00000586245 MPIP34949 423 aa12.76□□□□□ -0.37
VMP1-203ENST00000586245 FEN1P39748 380 aaKnown RBP12.76□□□□□ -0.37
VMP1-203ENST00000586245 STT3AP46977 705 aa12.76□□□□□ -0.37
VMP1-203ENST00000586245 MRPL19P49406 292 aaKnown RBP12.76□□□□□ -0.37
VMP1-203ENST00000586245 UCNP55089 124 aa12.76□□□□□ -0.37
VMP1-203ENST00000586245 UFM1P61960 85 aa12.76□□□□□ -0.37
VMP1-203ENST00000586245 IGLV3-21P80748 117 aaPredicted RBP12.76□□□□□ -0.37
VMP1-203ENST00000586245 SRSF11Q05519 484 aaKnown RBP12.76□□□□□ -0.37
VMP1-203ENST00000586245 EEF1A2Q05639 463 aaKnown RBP12.76□□□□□ -0.37
VMP1-203ENST00000586245 DPY19L1Q2PZI1 675 aa12.76□□□□□ -0.37
VMP1-203ENST00000586245 PGS1Q32NB8 556 aa12.76□□□□□ -0.37
VMP1-203ENST00000586245 CRTC2Q53ET0 693 aaPredicted RBP12.76□□□□□ -0.37
VMP1-203ENST00000586245 SFT2D3Q587I9 215 aa12.76□□□□□ -0.37
VMP1-203ENST00000586245 C6orf163Q5TEZ5 329 aa12.76□□□□□ -0.37
VMP1-203ENST00000586245 PPP1R32Q7Z5V6 425 aa12.76□□□□□ -0.37
VMP1-203ENST00000586245 PIGWQ7Z7B1 504 aa12.76□□□□□ -0.37
VMP1-203ENST00000586245 ST13P4Q8IZP2 240 aaPredicted RBP12.76□□□□□ -0.37
VMP1-203ENST00000586245 LRRC25Q8N386 305 aaPredicted RBP12.76□□□□□ -0.37
VMP1-203ENST00000586245 GLB1L3Q8NCI6 653 aaPredicted RBP12.76□□□□□ -0.37
VMP1-203ENST00000586245 OR7A2PQ8NGA2 310 aa12.76□□□□□ -0.37
VMP1-203ENST00000586245 THAP4Q8WY91 577 aa12.76□□□□□ -0.37
VMP1-203ENST00000586245 TESCQ96BS2 214 aa12.76□□□□□ -0.37
VMP1-203ENST00000586245 C8orf44Q96CB5 159 aa12.76□□□□□ -0.37
VMP1-203ENST00000586245 RBM18Q96H35 190 aaKnown RBP12.76□□□□□ -0.37
VMP1-203ENST00000586245 CLMPQ9H6B4 373 aa12.76□□□□□ -0.37
VMP1-203ENST00000586245 ADAP2Q9NPF8 381 aa12.76□□□□□ -0.37
VMP1-203ENST00000586245 FREM2Q5SZK8 3169 aa12.75□□□□□ -0.37
VMP1-203ENST00000586245 ANKRD28O15084 1053 aa12.75□□□□□ -0.37
VMP1-203ENST00000586245 NKX2-8O15522 239 aa12.75□□□□□ -0.37
VMP1-203ENST00000586245 WT1P19544 449 aaPredicted RBP12.75□□□□□ -0.37
VMP1-203ENST00000586245 NT5EP21589 574 aa12.75□□□□□ -0.37
VMP1-203ENST00000586245 GPX3P22352 226 aa12.75□□□□□ -0.37
VMP1-203ENST00000586245 TMPRSS3P57727 454 aa12.75□□□□□ -0.37
VMP1-203ENST00000586245 TLE3Q04726 772 aa12.75□□□□□ -0.37
VMP1-203ENST00000586245 CDC20Q12834 499 aa12.75□□□□□ -0.37
VMP1-203ENST00000586245 ELAVL1Q15717 326 aaKnown RBP12.75□□□□□ -0.37
VMP1-203ENST00000586245 ZNF750Q32MQ0 723 aa12.75□□□□□ -0.37
VMP1-203ENST00000586245 ZNF385BQ569K4 471 aa12.75□□□□□ -0.37
VMP1-203ENST00000586245 GKAP1Q5VSY0 366 aaPredicted RBP12.75□□□□□ -0.37
VMP1-203ENST00000586245 FAM180BQ6P0A1 224 aa12.75□□□□□ -0.37
VMP1-203ENST00000586245 PAPD4Q6PIY7 484 aaKnown RBP12.75□□□□□ -0.37
VMP1-203ENST00000586245 PAOXQ6QHF9 649 aa12.75□□□□□ -0.37
VMP1-203ENST00000586245 KIRREL2Q6UWL6 708 aa12.75□□□□□ -0.37
VMP1-203ENST00000586245 CAMKMTQ7Z624 323 aa12.75□□□□□ -0.37
VMP1-203ENST00000586245 MRGPREQ86SM8 312 aa12.75□□□□□ -0.37
VMP1-203ENST00000586245 CCDC116Q8IYX3 515 aa12.75□□□□□ -0.37
VMP1-203ENST00000586245 KDF1Q8NAX2 398 aaPredicted RBP12.75□□□□□ -0.37
VMP1-203ENST00000586245 OR11G2Q8NGC1 345 aa12.75□□□□□ -0.37
VMP1-203ENST00000586245 ZFP28Q8NHY6 868 aa12.75□□□□□ -0.37
VMP1-203ENST00000586245 ADAMTS17Q8TE56 1095 aa12.75□□□□□ -0.37
VMP1-203ENST00000586245 DAZLQ92904 295 aaKnown RBP12.75□□□□□ -0.37
VMP1-203ENST00000586245 PPWD1Q96BP3 646 aaKnown RBP12.75□□□□□ -0.37
VMP1-203ENST00000586245 COQ8BQ96D53 544 aa12.75□□□□□ -0.37
VMP1-203ENST00000586245 CNRIP1Q96F85 164 aaPredicted RBP12.75□□□□□ -0.37
VMP1-203ENST00000586245 ZBED6CLQ96FA7 236 aaPredicted RBP12.75□□□□□ -0.37
VMP1-203ENST00000586245 TEX37Q96LM6 180 aa12.75□□□□□ -0.37
VMP1-203ENST00000586245 ZNF681Q96N22 645 aa12.75□□□□□ -0.37
VMP1-203ENST00000586245 LPAR4Q99677 370 aa12.75□□□□□ -0.37
VMP1-203ENST00000586245 DUSP26Q9BV47 211 aa12.75□□□□□ -0.37
VMP1-203ENST00000586245 BHLHE41Q9C0J9 482 aaPredicted RBP12.75□□□□□ -0.37
VMP1-203ENST00000586245 ZNF700Q9H0M5 742 aa12.75□□□□□ -0.37
VMP1-203ENST00000586245 P4HTMQ9NXG6 502 aa12.75□□□□□ -0.37
VMP1-203ENST00000586245 SSUH2Q9Y2M2 353 aa12.75□□□□□ -0.37
VMP1-203ENST00000586245 ARL2BPQ9Y2Y0 163 aa12.75□□□□□ -0.37
VMP1-203ENST00000586245 CLDN16Q9Y5I7 305 aa12.75□□□□□ -0.37
VMP1-203ENST00000586245 CLCA3PQ9Y6N3 262 aa12.75□□□□□ -0.37
VMP1-203ENST00000586245 A0A087WV48 116 aa12.74□□□□□ -0.37
VMP1-203ENST00000586245 IGHV1-45A0A0A0MS14 117 aa12.74□□□□□ -0.37
VMP1-203ENST00000586245 NSG1A0A0A6YYJ2 146 aa12.74□□□□□ -0.37
VMP1-203ENST00000586245 IGHV3-20A0A0C4DH32 117 aa12.74□□□□□ -0.37
VMP1-203ENST00000586245 A0A1W2PS29 197 aa12.74□□□□□ -0.37
VMP1-203ENST00000586245 SAGE2PA6NJ88 616 aa12.74□□□□□ -0.37
VMP1-203ENST00000586245 MYO1GB0I1T2 1018 aa12.74□□□□□ -0.37
VMP1-203ENST00000586245 TAF4O00268 1085 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms