RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 ERVK-19Q9WJR5 959 aa16.7■□□□□ 0.26
SRSF1-208ENST00000584773 NCOA6Q14686 2063 aaPredicted RBP16.69■□□□□ 0.26
SRSF1-208ENST00000584773 ZNF407Q9C0G0 2248 aa16.69■□□□□ 0.26
SRSF1-208ENST00000584773 CENPEQ02224 2701 aa16.69■□□□□ 0.26
SRSF1-208ENST00000584773 CELSR2Q9HCU4 2923 aa16.69■□□□□ 0.26
SRSF1-208ENST00000584773 SYNDIG1LA6NDD5 238 aa16.69■□□□□ 0.26
SRSF1-208ENST00000584773 CDC40O60508 579 aaKnown RBP eCLIP16.69■□□□□ 0.26
SRSF1-208ENST00000584773 OR4F21O95013 312 aa16.69■□□□□ 0.26
SRSF1-208ENST00000584773 IGKV3-11P04433 115 aa16.69■□□□□ 0.26
SRSF1-208ENST00000584773 KLK1P06870 262 aa16.69■□□□□ 0.26
SRSF1-208ENST00000584773 COX7A2P14406 83 aa16.69■□□□□ 0.26
SRSF1-208ENST00000584773 TLX1P31314 330 aaPredicted RBP16.69■□□□□ 0.26
SRSF1-208ENST00000584773 PLIN5Q00G26 463 aa16.69■□□□□ 0.26
SRSF1-208ENST00000584773 ASPHQ12797 758 aa16.69■□□□□ 0.26
SRSF1-208ENST00000584773 CMPK2Q5EBM0 449 aa16.69■□□□□ 0.26
SRSF1-208ENST00000584773 TIFABQ6ZNK6 161 aa16.69■□□□□ 0.26
SRSF1-208ENST00000584773 Q6ZPB1 254 aaPredicted RBP16.69■□□□□ 0.26
SRSF1-208ENST00000584773 MMP21Q8N119 569 aa16.69■□□□□ 0.26
SRSF1-208ENST00000584773 GHDCQ8N2G8 530 aa16.69■□□□□ 0.26
SRSF1-208ENST00000584773 OR52N2Q8NGI0 321 aa16.69■□□□□ 0.26
SRSF1-208ENST00000584773 TRPC4APQ8TEL6 797 aa16.69■□□□□ 0.26
SRSF1-208ENST00000584773 TRIM44Q96DX7 344 aaPredicted RBP16.69■□□□□ 0.26
SRSF1-208ENST00000584773 TMEM237Q96Q45 408 aa16.69■□□□□ 0.26
SRSF1-208ENST00000584773 SERPINI1Q99574 410 aa16.69■□□□□ 0.26
SRSF1-208ENST00000584773 CNPPD1Q9BV87 410 aa16.69■□□□□ 0.26
SRSF1-208ENST00000584773 TIMMDC1Q9NPL8 285 aa16.69■□□□□ 0.26
SRSF1-208ENST00000584773 SUCOQ9UBS9 1254 aaKnown RBP16.69■□□□□ 0.26
SRSF1-208ENST00000584773 COPS7AQ9UBW8 275 aa16.69■□□□□ 0.26
SRSF1-208ENST00000584773 TBK1Q9UHD2 729 aa16.69■□□□□ 0.26
SRSF1-208ENST00000584773 FAM166BA8MTA8 275 aa16.68■□□□□ 0.26
SRSF1-208ENST00000584773 PRSS44E7EML9 344 aa16.68■□□□□ 0.26
SRSF1-208ENST00000584773 KLRC4-KLRK1H3BQV0 150 aa16.68■□□□□ 0.26
SRSF1-208ENST00000584773 DLX3O60479 287 aa16.68■□□□□ 0.26
SRSF1-208ENST00000584773 PDE9AO76083 593 aa16.68■□□□□ 0.26
SRSF1-208ENST00000584773 GPR75O95800 540 aa16.68■□□□□ 0.26
SRSF1-208ENST00000584773 MLYCDO95822 493 aa16.68■□□□□ 0.26
SRSF1-208ENST00000584773 PDYNP01213 254 aa16.68■□□□□ 0.26
SRSF1-208ENST00000584773 CLPSP04118 112 aa16.68■□□□□ 0.26
SRSF1-208ENST00000584773 ABOP16442 354 aa16.68■□□□□ 0.26
SRSF1-208ENST00000584773 ARFIP1P53367 373 aa16.68■□□□□ 0.26
SRSF1-208ENST00000584773 IFT88Q13099 833 aa16.68■□□□□ 0.26
SRSF1-208ENST00000584773 ZNF267Q14586 743 aaPredicted RBP16.68■□□□□ 0.26
SRSF1-208ENST00000584773 CDSNQ15517 529 aa16.68■□□□□ 0.26
SRSF1-208ENST00000584773 GGTA1PQ4G0N0 100 aa16.68■□□□□ 0.26
SRSF1-208ENST00000584773 UNC50Q53HI1 259 aa16.68■□□□□ 0.26
SRSF1-208ENST00000584773 MRGPRGQ86SM5 289 aa16.68■□□□□ 0.26
SRSF1-208ENST00000584773 ZFP62Q8NB50 900 aaPredicted RBP16.68■□□□□ 0.26
SRSF1-208ENST00000584773 OR2M7Q8NG81 312 aa16.68■□□□□ 0.26
SRSF1-208ENST00000584773 MZB1Q8WU39 189 aa16.68■□□□□ 0.26
SRSF1-208ENST00000584773 RBM18Q96H35 190 aaKnown RBP16.68■□□□□ 0.26
SRSF1-208ENST00000584773 PHF12Q96QT6 1004 aa16.68■□□□□ 0.26
SRSF1-208ENST00000584773 ELOVL6Q9H5J4 265 aa16.68■□□□□ 0.26
SRSF1-208ENST00000584773 PSD3Q9NYI0 1048 aa16.68■□□□□ 0.26
SRSF1-208ENST00000584773 PPT2Q9UMR5 302 aa16.68■□□□□ 0.26
SRSF1-208ENST00000584773 SLC12A4Q9UP95 1085 aa16.68■□□□□ 0.26
SRSF1-208ENST00000584773 A0A1B0GTH9 108 aa16.67■□□□□ 0.26
SRSF1-208ENST00000584773 OR10H2O60403 315 aa16.67■□□□□ 0.26
SRSF1-208ENST00000584773 SEMA3DO95025 777 aa16.67■□□□□ 0.26
SRSF1-208ENST00000584773 NADKO95544 446 aaPredicted RBP16.67■□□□□ 0.26
SRSF1-208ENST00000584773 SHBGP04278 402 aa16.67■□□□□ 0.26
SRSF1-208ENST00000584773 CCL3P10147 92 aa16.67■□□□□ 0.26
SRSF1-208ENST00000584773 HSD17B3P37058 310 aa16.67■□□□□ 0.26
SRSF1-208ENST00000584773 CASP6P55212 293 aa16.67■□□□□ 0.26
SRSF1-208ENST00000584773 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.67■□□□□ 0.262e-8■■■□□ 14.7
SRSF1-208ENST00000584773 ZNF678Q5SXM1 525 aa16.67■□□□□ 0.26
SRSF1-208ENST00000584773 LGSNQ5TDP6 509 aa16.67■□□□□ 0.26
SRSF1-208ENST00000584773 ST13P4Q8IZP2 240 aaPredicted RBP16.67■□□□□ 0.26
SRSF1-208ENST00000584773 POGLUT1Q8NBL1 392 aa16.67■□□□□ 0.26
SRSF1-208ENST00000584773 OR5L2Q8NGL0 311 aa16.67■□□□□ 0.26
SRSF1-208ENST00000584773 OR8K3Q8NH51 312 aa16.67■□□□□ 0.26
SRSF1-208ENST00000584773 C16orf52Q8NHV5 167 aa16.67■□□□□ 0.26
SRSF1-208ENST00000584773 AGAP11Q8TF27 550 aa16.67■□□□□ 0.26
SRSF1-208ENST00000584773 SELENOMQ8WWX9 145 aa16.67■□□□□ 0.26
SRSF1-208ENST00000584773 MTBPQ96DY7 904 aa16.67■□□□□ 0.26
SRSF1-208ENST00000584773 FBXL20Q96IG2 436 aa16.67■□□□□ 0.26
SRSF1-208ENST00000584773 GAL3ST4Q96RP7 486 aa16.67■□□□□ 0.26
SRSF1-208ENST00000584773 C1QTNF3Q9BXJ4 246 aa16.67■□□□□ 0.26
SRSF1-208ENST00000584773 DEFB127Q9H1M4 99 aa16.67■□□□□ 0.26
SRSF1-208ENST00000584773 DNAJC13O75165 2243 aa16.66■□□□□ 0.26
SRSF1-208ENST00000584773 TEX15Q9BXT5 2789 aa16.66■□□□□ 0.26
SRSF1-208ENST00000584773 ITPR2Q14571 2701 aa16.66■□□□□ 0.26
SRSF1-208ENST00000584773 A0A1W2PPM1 405 aa16.66■□□□□ 0.26
SRSF1-208ENST00000584773 SUPT7LO94864 414 aa16.66■□□□□ 0.26
SRSF1-208ENST00000584773 OTCP00480 354 aa16.66■□□□□ 0.26
SRSF1-208ENST00000584773 CT62P0C5K7 136 aa16.66■□□□□ 0.26
SRSF1-208ENST00000584773 PYGBP11216 843 aa16.66■□□□□ 0.26
SRSF1-208ENST00000584773 ESRRAP11474 423 aaPredicted RBP16.66■□□□□ 0.26
SRSF1-208ENST00000584773 CHN1P15882 459 aa16.66■□□□□ 0.26
SRSF1-208ENST00000584773 SSTR4P31391 388 aa16.66■□□□□ 0.26
SRSF1-208ENST00000584773 DNASE1L1P49184 302 aa16.66■□□□□ 0.26
SRSF1-208ENST00000584773 CLCQ05315 142 aa16.66■□□□□ 0.26
SRSF1-208ENST00000584773 GALNT1Q10472 559 aaPredicted RBP16.66■□□□□ 0.26
SRSF1-208ENST00000584773 PIGGQ5H8A4 983 aa16.66■□□□□ 0.26
SRSF1-208ENST00000584773 OR52E8Q6IFG1 317 aa16.66■□□□□ 0.26
SRSF1-208ENST00000584773 LYPD8Q6UX82 237 aa16.66■□□□□ 0.26
SRSF1-208ENST00000584773 COMMD6Q7Z4G1 85 aa16.66■□□□□ 0.26
SRSF1-208ENST00000584773 DOLPP1Q86YN1 238 aa16.66■□□□□ 0.26
SRSF1-208ENST00000584773 GPALPP1Q8IXQ4 340 aa16.66■□□□□ 0.26
SRSF1-208ENST00000584773 METTL4Q8N3J2 472 aa16.66■□□□□ 0.26
SRSF1-208ENST00000584773 CDYL2Q8N8U2 506 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms