RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 VTI1BQ9UEU0 232 aa10.33□□□□□ -0.76
CCDC47-206ENST00000584112 ZNF835Q9Y2P0 537 aa10.33□□□□□ -0.76
CCDC47-206ENST00000584112 ASB1Q9Y576 335 aa10.33□□□□□ -0.76
CCDC47-206ENST00000584112 CLDN16Q9Y5I7 305 aa10.33□□□□□ -0.76
CCDC47-206ENST00000584112 A8MVJ9 347 aa10.32□□□□□ -0.76
CCDC47-206ENST00000584112 TFECO14948 347 aaPredicted RBP10.32□□□□□ -0.76
CCDC47-206ENST00000584112 KLHL2O95198 593 aa10.32□□□□□ -0.76
CCDC47-206ENST00000584112 TGFB1P01137 390 aa10.32□□□□□ -0.76
CCDC47-206ENST00000584112 IFNA2P01563 188 aa10.32□□□□□ -0.76
CCDC47-206ENST00000584112 TUBB4AP04350 444 aa10.32□□□□□ -0.76
CCDC47-206ENST00000584112 C2P06681 752 aa10.32□□□□□ -0.76
CCDC47-206ENST00000584112 COX7A2P14406 83 aa10.32□□□□□ -0.76
CCDC47-206ENST00000584112 TNNI3P19429 210 aa10.32□□□□□ -0.76
CCDC47-206ENST00000584112 CPN2P22792 545 aa10.32□□□□□ -0.76
CCDC47-206ENST00000584112 ATP5A1P25705 553 aaKnown RBP10.32□□□□□ -0.76
CCDC47-206ENST00000584112 TYK2P29597 1187 aa10.32□□□□□ -0.76
CCDC47-206ENST00000584112 PPP2R1BP30154 601 aa10.32□□□□□ -0.76
CCDC47-206ENST00000584112 GMPRP36959 345 aa10.32□□□□□ -0.76
CCDC47-206ENST00000584112 PIK3CBP42338 1070 aa10.32□□□□□ -0.76
CCDC47-206ENST00000584112 PIK3CGP48736 1102 aa10.32□□□□□ -0.76
CCDC47-206ENST00000584112 RAP1GDS1P52306 607 aa10.32□□□□□ -0.76
CCDC47-206ENST00000584112 ARFIP1P53367 373 aa10.32□□□□□ -0.76
CCDC47-206ENST00000584112 ALDH18A1P54886 795 aaKnown RBP10.32□□□□□ -0.76
CCDC47-206ENST00000584112 SETDB1Q15047 1291 aa10.32□□□□□ -0.76
CCDC47-206ENST00000584112 ACAP2Q15057 778 aa10.32□□□□□ -0.76
CCDC47-206ENST00000584112 UAP1Q16222 522 aaPredicted RBP10.32□□□□□ -0.76
CCDC47-206ENST00000584112 WHAMMP3Q1A5X7 153 aa10.32□□□□□ -0.76
CCDC47-206ENST00000584112 KHDRBS2Q5VWX1 349 aaKnown RBP10.32□□□□□ -0.76
CCDC47-206ENST00000584112 LIPJQ5W064 366 aa10.32□□□□□ -0.76
CCDC47-206ENST00000584112 METTL2BQ6P1Q9 378 aaKnown RBP10.32□□□□□ -0.76
CCDC47-206ENST00000584112 BHLHB9Q6PI77 547 aa10.32□□□□□ -0.76
CCDC47-206ENST00000584112 PAMR1Q6UXH9 720 aa10.32□□□□□ -0.76
CCDC47-206ENST00000584112 HSDL2Q6YN16 418 aa10.32□□□□□ -0.76
CCDC47-206ENST00000584112 ZNF793Q6ZN11 406 aa10.32□□□□□ -0.76
CCDC47-206ENST00000584112 MYLK4Q86YV6 388 aaPredicted RBP10.32□□□□□ -0.76
CCDC47-206ENST00000584112 VWA5B2Q8N398 1253 aa10.32□□□□□ -0.76
CCDC47-206ENST00000584112 TEX9Q8N6V9 391 aa10.32□□□□□ -0.76
CCDC47-206ENST00000584112 ASB15Q8WXK1 588 aa10.32□□□□□ -0.76
CCDC47-206ENST00000584112 RGMAQ96B86 450 aa10.32□□□□□ -0.76
CCDC47-206ENST00000584112 MRRFQ96E11 262 aaKnown RBP10.32□□□□□ -0.76
CCDC47-206ENST00000584112 C16orf45Q96MC5 204 aaPredicted RBP10.32□□□□□ -0.76
CCDC47-206ENST00000584112 MAPKAP1Q9BPZ7 522 aa10.32□□□□□ -0.76
CCDC47-206ENST00000584112 LRRC1Q9BTT6 524 aa10.32□□□□□ -0.76
CCDC47-206ENST00000584112 UCK2Q9BZX2 261 aa10.32□□□□□ -0.76
CCDC47-206ENST00000584112 CLEC4MQ9H2X3 399 aaPredicted RBP10.32□□□□□ -0.76
CCDC47-206ENST00000584112 ACSS3Q9H6R3 686 aa10.32□□□□□ -0.76
CCDC47-206ENST00000584112 HPF1Q9NWY4 346 aa10.32□□□□□ -0.76
CCDC47-206ENST00000584112 MS4A12Q9NXJ0 267 aa10.32□□□□□ -0.76
CCDC47-206ENST00000584112 KCMF1Q9P0J7 381 aa10.32□□□□□ -0.76
CCDC47-206ENST00000584112 COPS7AQ9UBW8 275 aa10.32□□□□□ -0.76
CCDC47-206ENST00000584112 ZNF223Q9UK11 482 aaPredicted RBP10.32□□□□□ -0.76
CCDC47-206ENST00000584112 ERVK-11Q9UQG0 969 aa10.32□□□□□ -0.76
CCDC47-206ENST00000584112 TSC22D4Q9Y3Q8 395 aa10.32□□□□□ -0.76
CCDC47-206ENST00000584112 PCDHGA11Q9Y5H2 935 aa10.32□□□□□ -0.76
CCDC47-206ENST00000584112 TNPO3Q9Y5L0 923 aaKnown RBP10.32□□□□□ -0.76
CCDC47-206ENST00000584112 A0A096LPK6 155 aa10.31□□□□□ -0.76
CCDC47-206ENST00000584112 C17orf105B2RV13 164 aa10.31□□□□□ -0.76
CCDC47-206ENST00000584112 RTCAO00442 366 aaKnown RBP10.31□□□□□ -0.76
CCDC47-206ENST00000584112 PRRG2O14669 202 aa10.31□□□□□ -0.76
CCDC47-206ENST00000584112 ZNHIT1O43257 154 aa10.31□□□□□ -0.76
CCDC47-206ENST00000584112 DYRK3O43781 588 aa10.31□□□□□ -0.76
CCDC47-206ENST00000584112 PEX1O43933 1283 aa10.31□□□□□ -0.76
CCDC47-206ENST00000584112 UGDHO60701 494 aa10.31□□□□□ -0.76
CCDC47-206ENST00000584112 LDB3O75112 727 aa10.31□□□□□ -0.76
CCDC47-206ENST00000584112 URI1O94763 535 aaPredicted RBP10.31□□□□□ -0.76
CCDC47-206ENST00000584112 INHBAP08476 426 aa10.31□□□□□ -0.76
CCDC47-206ENST00000584112 MTHFD2P13995 350 aa10.31□□□□□ -0.76
CCDC47-206ENST00000584112 TLX1P31314 330 aaPredicted RBP10.31□□□□□ -0.76
CCDC47-206ENST00000584112 NKX6-1P78426 367 aaPredicted RBP10.31□□□□□ -0.76
CCDC47-206ENST00000584112 IRF9Q00978 393 aa10.31□□□□□ -0.76
CCDC47-206ENST00000584112 TFF3Q07654 80 aa10.31□□□□□ -0.76
CCDC47-206ENST00000584112 DDX39BQ13838 428 aaKnown RBP10.31□□□□□ -0.76
CCDC47-206ENST00000584112 PFKFB4Q16877 469 aa10.31□□□□□ -0.76
CCDC47-206ENST00000584112 DEPDC1Q5TB30 811 aa10.31□□□□□ -0.76
CCDC47-206ENST00000584112 OR4C11Q6IEV9 310 aa10.31□□□□□ -0.76
CCDC47-206ENST00000584112 C3P1Q6ZMU1 363 aa10.31□□□□□ -0.76
CCDC47-206ENST00000584112 UBE3DQ7Z6J8 389 aa10.31□□□□□ -0.76
CCDC47-206ENST00000584112 RELL1Q8IUW5 271 aa10.31□□□□□ -0.76
CCDC47-206ENST00000584112 SULF2Q8IWU5 870 aa10.31□□□□□ -0.76
CCDC47-206ENST00000584112 MNS1Q8NEH6 495 aa10.31□□□□□ -0.76
CCDC47-206ENST00000584112 OR5L2Q8NGL0 311 aa10.31□□□□□ -0.76
CCDC47-206ENST00000584112 OR8K3Q8NH51 312 aa10.31□□□□□ -0.76
CCDC47-206ENST00000584112 C16orf52Q8NHV5 167 aa10.31□□□□□ -0.76
CCDC47-206ENST00000584112 HUS1BQ8NHY5 278 aa10.31□□□□□ -0.76
CCDC47-206ENST00000584112 PTPMT1Q8WUK0 201 aaPredicted RBP10.31□□□□□ -0.76
CCDC47-206ENST00000584112 C19orf24Q9BVV8 132 aa10.31□□□□□ -0.76
CCDC47-206ENST00000584112 OR8D2Q9GZM6 311 aa10.31□□□□□ -0.76
CCDC47-206ENST00000584112 ACTR8Q9H981 624 aa10.31□□□□□ -0.76
CCDC47-206ENST00000584112 DMRT3Q9NQL9 472 aa10.31□□□□□ -0.76
CCDC47-206ENST00000584112 CPSF2Q9P2I0 782 aaKnown RBP10.31□□□□□ -0.76
CCDC47-206ENST00000584112 MYOTQ9UBF9 498 aa10.31□□□□□ -0.76
CCDC47-206ENST00000584112 PHF11Q9UIL8 331 aa10.31□□□□□ -0.76
CCDC47-206ENST00000584112 TMCO1Q9UM00 188 aa10.31□□□□□ -0.76
CCDC47-206ENST00000584112 IKBKGQ9Y6K9 419 aa10.31□□□□□ -0.76
CCDC47-206ENST00000584112 PRKDCP78527 4128 aaKnown RBP10.31□□□□□ -0.76
CCDC47-206ENST00000584112 HMX2A2RU54 273 aa10.3□□□□□ -0.76
CCDC47-206ENST00000584112 FAM90A27PA6NNH2 459 aa10.3□□□□□ -0.76
CCDC47-206ENST00000584112 H0YIV9 168 aa10.3□□□□□ -0.76
CCDC47-206ENST00000584112 KLK8O60259 260 aa10.3□□□□□ -0.76
CCDC47-206ENST00000584112 PRKNO60260 465 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms